Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0739000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30872771:30882051:1 gene:Os02g0739000 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0739000-01);Similar to predicted protein. (Os02t0739000-02)
Sequence	ATGCACTGCCTCGCCCCCCACTTCCTCCTCTTCCTCCCACTCTCCTCCGCCTCCCGCCAC GCGCTCCCCCACACCCCACCCGCTCCTCTCCTCCTCCCCTCCCACCCAGCCCAAGCCCAA GCCCAAGCCCGCGCCGGCCCGCTCCGCCTCCCATCCGCGCGCTCCCCTTCCCGCGCCGCT GCCCCCGTCTCCGACGACGACGAGGACGAGGAGGATGACGAAGAGATAGACATCCGCGAC GACGCGGACGTGGACGAGGAGTACGACGACGACGACGACGAGGAGCTGGACGAGGAGAGC GGCGGTGAGGAGGAGGAGGAGGAGGAAGGGGATGATGGGGTGGAGGAGTTGGAGGAGGAG GAGGGTGGGCGGGAGGGGACCGCTGCGCGGAGGCGGCGGTCGGAGGAGTACAAGTCGCAG CGGGTGGGGAAGCTGGTCGCCGAGGTGCGGGAGTTCGGGGAGGATATCATCGACTACAAC GAGCTCGCGGGGATCTACGACTTCCCCATTGACAAGTTTCAGCGCTTGGCTATACAAGCA TTTTTGAGAGGCTCATCTGTCGTAGTTTCTGCACCTACAAGTAGTGGGAAGACACTAATT GCAGAAGCTGCAGCTGTTGCAACAGTCGCTAGAGGAAGACGCCTCTTCTACACAACACCG TTAAAGGCCTTATCTAATCAGAAGTTCCGTGATTTCCGGAATACGTTTGGTGATCATAAT GTTGGTCTTCTTACAGGAGATTCTGCTATTAACAAAGATGCTCAGATCCTGATAATGACA ACAGAGATTCTGCGTAACATGCTGTATCAAAGTGTCGGTATGGCAGCATCAGAAGGTAGA TTATTTCAAGTTGATGTTATTGTTTTGGACGAAGTCCATTACTTAAGTGACATTTCACGT GGCACTGTTTGGGAAGAAACTGTGATATATTGTCCAAAGGAAGTCCAGCTTATATGCTTA TCAGCCACTGTTGCAAATCCTGATGAATTAGCTGGCTGGATTGGTCAGATCCACGGTAAA ACAGAGTTGGTGACATCACACAAACGACCAGTTCCACTTACTTGGCACTTCTCAAAGAAG TTTGCACTTGTACCACTTCTTGATGGGAAAGGAAAGAAAATGAATAGGAAATTGCGAATG TCTCACTTCCAGAACCTATCTTCTCCAAAAAGTGAATTCTATTATGTGAAAGGAAAGAGG AAGCTTAGAACAACTAAAAATGAACAAGGTAACAGAAGCCCCTTGGACATCTCAAAACAG GTTCAGTTGTCAAAGCATGAGCTCACCAATATGCGCCGGTCTCAAGTTCCATTAATACGT GATACTTTATCACAACTTTGGGAAAATGACATGCTTCCAGCTATTTGGTTTATTTTTAGT AGAAGAGGGTGTGATGCAGCTGTTGAATATCTTGAAGATTGTAGACTTCTGCATGATTGC GAGGCTAGTGAAGTTGAGCTGGAACTTAAGAGGTTCAGGATGCAATACCCTGATGCTATC CGGGAAAGTGCTGTGAAAGGACTCTTACGAGGAGTTGCTGCCCATCATGCTGGTTGCTTG CCACTGTGGAAATCTTTCATTGAAGAATTATTTCAGCGTGGCCTTGTTAAAGTAGTCTTT GCAACAGAAACCCTTGCAGCAGGGATTAACATGCCTGCTAGAACATCTGTGATTTCTTCT CTCAGCAAAAGAATTGACGCTGGGCGCCAGCTCTTAACCCCAAATGAATTATTCCAGATG GCAGGTCGTGCTGGACGAAGAGGGATTGATACAGTTGGGCATTCTGTTCTTGTTCAGACT ACTTATGAAGGGCCTGAAGAATGTTGCGATGTTATCTTTGCTGGACTTGAGCCACTTGTT TCACAATTTACTGCATCATATGGGATGGTTTTGAATCTCCTTGCTGGCTCAAAAGTTACT CATAATCAGAAAGAATCGGATGATATTAAGGTTAAGCGTTCTGGAAGAACTTTAGAAGAA GCTCGAAAGTTAGTTGAGCAAAGCTTTGGTAACTATGTTGGGAGCAATGTAATGGTTGCT GCTAAAGAAGAGCTTGAAAGAATACAGAGTGAAATACAATATCTCTCTTCAGAAATTACA GATGAATCCATTGACCGAAAGTGTAGGGAAGAATTATCTGAGGAAGACTATGCTGAGATT TCCCTTCTTCAAAAGAAATTGAAGGAAGAGAAGCAGATGAGAAATGAACTGAAAAAAAGG ATGGAACTAGAGAGAATGGTGGCATGGAAAACTCGGTTGGAAGAATTTGAAAGTGGTCAC CTTCCTTTCATGTGCTTGCAGTACAAAGACAAAGATTCAGTTCAGCATACTATTCCTGCT GTTTTCATTGGAAGCCTCAGTTCATTTGCGGATCAAAAGATTGTGAGCTTGGTGGAAAAT GATTCTCCTGTTGCTGGCAAGCAGAAAGTTGACAATGAAGGACAGCAATATTACCCATCT TATTATGTAGCCTTGAGTTCAGACAACTCATGGTATCTATTCACCGAAAAATGGATTAAA GCTGTTTACAAGACAGGTCTACCTGCTGTTCCTTCAGCAGAGGGAGGCCCTCTCCCTAGA GAAACCCTGAAGCAGCTCCTTTTGCGTGAAGATATGATGTGGGATAAAATTGCAAAATCA GAATATGGTTCTTTGTTATGCATGGATGGATCTCTGGACACATGGTCGTGGAGTCTCAAT GTTCCCGTGCTTAATAGCCTTTCAGAAGATGATGAGGTAGAACGATTCTCCCAGGAACAT CAAGATGCTGTAGAATGTCATAAGCAACAGAGAAAGAAAGTTTCACAATTGAAGAAAACA ATCAGGAGTACTAAGGGTTTCAAAGAATTTCAAAAGATCATCGACATGAGAAACTTTACA AAAGAAAAGATCGAGCGTTTGGAAGCTAGATCTCGTCGTTTGACTCGGCGGATAAGACAA ATTGAACCAACTGGTTGGAAGGAATTTTTGCAGATTAGCAAAGTCATACAAGAGGCTAGA GCATTAGATATCAATACTCAGGTAATCTATCCGTTGGGTGAGACGGCAGCAGCCATACGA GGGGAAAACGAGCTCTGGCTTGCCATGGTTCTTAGGAACAAGGTCCTTTTGGATCTGAAG CCTTCTCAACTTGCAGCAATATGTGGAAGTTTAGTGTCAGAAGGGATCAAACTTCGTCCC TGGAAAAACAGCAGTTATGTATATGAACCATCTTCTGTTGTTACTGGTGTTATAAACTAC TTAGAAGAGCAGAGAAACTCACTCGTCGATCTCCAAGAGAAGCACAGTGTAAAGATACCC TGCGAAATAGATGCCCAGTTTGCTGGGATGGTTGAAGCCTGGGCATCAGGGTTGACCTGG AGGGAGATAATGATGGACTCGGCAATGGATGATGGAGATTTAGCCCGTCTGCTCAGACGC ACGATTGATTTACTAGCCCAGATTCCAAAATTGCCAGATATAGATCCGGTTCTCCAAAAG AACGCACAAATTGCTTGCAACATCATGGACCGGGTACCGATAAGTGAGCTTGCTGGCTGA

Peptide Sequence

PEP ID	Os02t0739000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30872771:30882051:1 gene:Os02g0739000 transcript:Os02t0739000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0739000-01);Similar to predicted protein. (Os02t0739000-02)
Sequence	MHCLAPHFLLFLPLSSASRHALPHTPPAPLLLPSHPAQAQAQARAGPLRLPSARSPSRAA APVSDDDEDEEDDEEIDIRDDADVDEEYDDDDDEELDEESGGEEEEEEEGDDGVEELEEE EGGREGTAARRRRSEEYKSQRVGKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQA FLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHN VGLLTGDSAINKDAQILIMTTEILRNMLYQSVGMAASEGRLFQVDVIVLDEVHYLSDISR GTVWEETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSHKRPVPLTWHFSKK FALVPLLDGKGKKMNRKLRMSHFQNLSSPKSEFYYVKGKRKLRTTKNEQGNRSPLDISKQ VQLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDC EASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVF ATETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQT TYEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEE ARKLVEQSFGNYVGSNVMVAAKEELERIQSEIQYLSSEITDESIDRKCREELSEEDYAEI SLLQKKLKEEKQMRNELKKRMELERMVAWKTRLEEFESGHLPFMCLQYKDKDSVQHTIPA VFIGSLSSFADQKIVSLVENDSPVAGKQKVDNEGQQYYPSYYVALSSDNSWYLFTEKWIK AVYKTGLPAVPSAEGGPLPRETLKQLLLREDMMWDKIAKSEYGSLLCMDGSLDTWSWSLN VPVLNSLSEDDEVERFSQEHQDAVECHKQQRKKVSQLKKTIRSTKGFKEFQKIIDMRNFT KEKIERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIR GENELWLAMVLRNKVLLDLKPSQLAAICGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINY LEEQRNSLVDLQEKHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRR TIDLLAQIPKLPDIDPVLQKNAQIACNIMDRVPISELAG

Transcript Sequence

Transcript ID	Os02t0739000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30872771:30882051:1 gene:Os02g0739000 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0739000-01);Similar to predicted protein. (Os02t0739000-02)
Sequence	GCGAGAACCACCACACCCTCCCGCCATGCACTGCCTCGCCCCCCACTTCCTCCTCTTCCT CCCACTCTCCTCCGCCTCCCGCCACGCGCTCCCCCACACCCCACCCGCTCCTCTCCTCCT CCCCTCCCACCCAGCCCAAGCCCAAGCCCAAGCCCGCGCCGGCCCGCTCCGCCTCCCATC CGCGCGCTCCCCTTCCCGCGCCGCTGCCCCCGTCTCCGACGACGACGAGGACGAGGAGGA TGACGAAGAGATAGACATCCGCGACGACGCGGACGTGGACGAGGAGTACGACGACGACGA CGACGAGGAGCTGGACGAGGAGAGCGGCGGTGAGGAGGAGGAGGAGGAGGAAGGGGATGA TGGGGTGGAGGAGTTGGAGGAGGAGGAGGGTGGGCGGGAGGGGACCGCTGCGCGGAGGCG GCGGTCGGAGGAGTACAAGTCGCAGCGGGTGGGGAAGCTGGTCGCCGAGGTGCGGGAGTT CGGGGAGGATATCATCGACTACAACGAGCTCGCGGGGATCTACGACTTCCCCATTGACAA GTTTCAGCGCTTGGCTATACAAGCATTTTTGAGAGGCTCATCTGTCGTAGTTTCTGCACC TACAAGTAGTGGGAAGACACTAATTGCAGAAGCTGCAGCTGTTGCAACAGTCGCTAGAGG AAGACGCCTCTTCTACACAACACCGTTAAAGGCCTTATCTAATCAGAAGTTCCGTGATTT CCGGAATACGTTTGGTGATCATAATGTTGGTCTTCTTACAGGAGATTCTGCTATTAACAA AGATGCTCAGATCCTGATAATGACAACAGAGATTCTGCGTAACATGCTGTATCAAAGTGT CGGTATGGCAGCATCAGAAGGTAGATTATTTCAAGTTGATGTTATTGTTTTGGACGAAGT CCATTACTTAAGTGACATTTCACGTGGCACTGTTTGGGAAGAAACTGTGATATATTGTCC AAAGGAAGTCCAGCTTATATGCTTATCAGCCACTGTTGCAAATCCTGATGAATTAGCTGG CTGGATTGGTCAGATCCACGGTAAAACAGAGTTGGTGACATCACACAAACGACCAGTTCC ACTTACTTGGCACTTCTCAAAGAAGTTTGCACTTGTACCACTTCTTGATGGGAAAGGAAA GAAAATGAATAGGAAATTGCGAATGTCTCACTTCCAGAACCTATCTTCTCCAAAAAGTGA ATTCTATTATGTGAAAGGAAAGAGGAAGCTTAGAACAACTAAAAATGAACAAGGTAACAG AAGCCCCTTGGACATCTCAAAACAGGTTCAGTTGTCAAAGCATGAGCTCACCAATATGCG CCGGTCTCAAGTTCCATTAATACGTGATACTTTATCACAACTTTGGGAAAATGACATGCT TCCAGCTATTTGGTTTATTTTTAGTAGAAGAGGGTGTGATGCAGCTGTTGAATATCTTGA AGATTGTAGACTTCTGCATGATTGCGAGGCTAGTGAAGTTGAGCTGGAACTTAAGAGGTT CAGGATGCAATACCCTGATGCTATCCGGGAAAGTGCTGTGAAAGGACTCTTACGAGGAGT TGCTGCCCATCATGCTGGTTGCTTGCCACTGTGGAAATCTTTCATTGAAGAATTATTTCA GCGTGGCCTTGTTAAAGTAGTCTTTGCAACAGAAACCCTTGCAGCAGGGATTAACATGCC TGCTAGAACATCTGTGATTTCTTCTCTCAGCAAAAGAATTGACGCTGGGCGCCAGCTCTT AACCCCAAATGAATTATTCCAGATGGCAGGTCGTGCTGGACGAAGAGGGATTGATACAGT TGGGCATTCTGTTCTTGTTCAGACTACTTATGAAGGGCCTGAAGAATGTTGCGATGTTAT CTTTGCTGGACTTGAGCCACTTGTTTCACAATTTACTGCATCATATGGGATGGTTTTGAA TCTCCTTGCTGGCTCAAAAGTTACTCATAATCAGAAAGAATCGGATGATATTAAGGTTAA GCGTTCTGGAAGAACTTTAGAAGAAGCTCGAAAGTTAGTTGAGCAAAGCTTTGGTAACTA TGTTGGGAGCAATGTAATGGTTGCTGCTAAAGAAGAGCTTGAAAGAATACAGAGTGAAAT ACAATATCTCTCTTCAGAAATTACAGATGAATCCATTGACCGAAAGTGTAGGGAAGAATT ATCTGAGGAAGACTATGCTGAGATTTCCCTTCTTCAAAAGAAATTGAAGGAAGAGAAGCA GATGAGAAATGAACTGAAAAAAAGGATGGAACTAGAGAGAATGGTGGCATGGAAAACTCG GTTGGAAGAATTTGAAAGTGGTCACCTTCCTTTCATGTGCTTGCAGTACAAAGACAAAGA TTCAGTTCAGCATACTATTCCTGCTGTTTTCATTGGAAGCCTCAGTTCATTTGCGGATCA AAAGATTGTGAGCTTGGTGGAAAATGATTCTCCTGTTGCTGGCAAGCAGAAAGTTGACAA TGAAGGACAGCAATATTACCCATCTTATTATGTAGCCTTGAGTTCAGACAACTCATGGTA TCTATTCACCGAAAAATGGATTAAAGCTGTTTACAAGACAGGTCTACCTGCTGTTCCTTC AGCAGAGGGAGGCCCTCTCCCTAGAGAAACCCTGAAGCAGCTCCTTTTGCGTGAAGATAT GATGTGGGATAAAATTGCAAAATCAGAATATGGTTCTTTGTTATGCATGGATGGATCTCT GGACACATGGTCGTGGAGTCTCAATGTTCCCGTGCTTAATAGCCTTTCAGAAGATGATGA GGTAGAACGATTCTCCCAGGAACATCAAGATGCTGTAGAATGTCATAAGCAACAGAGAAA GAAAGTTTCACAATTGAAGAAAACAATCAGGAGTACTAAGGGTTTCAAAGAATTTCAAAA GATCATCGACATGAGAAACTTTACAAAAGAAAAGATCGAGCGTTTGGAAGCTAGATCTCG TCGTTTGACTCGGCGGATAAGACAAATTGAACCAACTGGTTGGAAGGAATTTTTGCAGAT TAGCAAAGTCATACAAGAGGCTAGAGCATTAGATATCAATACTCAGGTAATCTATCCGTT GGGTGAGACGGCAGCAGCCATACGAGGGGAAAACGAGCTCTGGCTTGCCATGGTTCTTAG GAACAAGGTCCTTTTGGATCTGAAGCCTTCTCAACTTGCAGCAATATGTGGAAGTTTAGT GTCAGAAGGGATCAAACTTCGTCCCTGGAAAAACAGCAGTTATGTATATGAACCATCTTC TGTTGTTACTGGTGTTATAAACTACTTAGAAGAGCAGAGAAACTCACTCGTCGATCTCCA AGAGAAGCACAGTGTAAAGATACCCTGCGAAATAGATGCCCAGTTTGCTGGGATGGTTGA AGCCTGGGCATCAGGGTTGACCTGGAGGGAGATAATGATGGACTCGGCAATGGATGATGG AGATTTAGCCCGTCTGCTCAGACGCACGATTGATTTACTAGCCCAGATTCCAAAATTGCC AGATATAGATCCGGTTCTCCAAAAGAACGCACAAATTGCTTGCAACATCATGGACCGGGT ACCGATAAGTGAGCTTGCTGGCTGAAAGTATGTGAAATCTGTAAGTACCACATTGAATGT GAAATCTGTAAGTACCACATTGAATGTGAAATCTGTAAGTACCACATTGACCATTTGTTT TAGGTAGGCAATTCTTTGTTGTATCATGCACATGCAGTTATCAAATTGACAGAGATCATT TTCC