Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0738200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30805988:30807610:-1 gene:Os02g0738200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 40, U-box protein 40 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0738200-01)
Sequence	ATGGTCACTCCGATGACTCGCGCCCGCGCCCGCGCCCGCGCCGTGCGGCTGGCCGTGTCG GAGATCCCTCTCGCCGTGCGGCGATCGGCGAGGCAGCAGCAGCAGCCGCCTGAGCCAGCC GCAGACGTGCCGGACCATTTCTTGTGCCCGATCTCGCTGGACATGATGAGGGACCCCGTG ACGGCGCCGACGGGGATCACGTACGACCGGGACGGGGTGGAGGTGTGGCTGGAGCGCGGG CGGCCGACGTGCCCCGTCACCGGCCGCCCGCTGCGGCCGGAGGAGCTGGTGCCGAACCAT GCCACGCGGAGGATGATCCAGGAGTGGTGCGTCGCGAACCGGGCCCTCGGGGTGGAGCGC GTGCCCACGCCGCGGGTGCCCGTTTCCGCCGCCGACGCGCGCGAGATCCTCGAGGGCGTC GCCGCGGCGGCGCGGCGAGGGGACGCGGCGGCGTGCGGGAGGATGGTGGCCAGGGCTAGG GCGCTCGGGAAGGAGAGCGAGCGGAATCGCCGGTGCTTGGCGTCCGCCGGCGCCGAGCGC GCGCTCGCGCTCGCGTTCTCTCGTCTCGCCGCGGCGTCCACCGACCAGCAGGCGGAGGCG CGCGCCTGCGCCCTCGAGGAGATCTTGGCCGCGCTGGTCGTCTTCTTCCCGCTCGACGAG GAGTCCAGGCGCTGCATTGCCTCCCCGCCGTCGCTGGACGCCCTCGTCTCGATCCTCTCT CACGGCGAGCAGGTCACGCGTGTCAGCGCCGTCGTTGTGCTCCGGGAGATCGCCTCGTCG TGCGACAACCAGTGCCTCGAGGCAATGTCCAAGGCGAACGCCATGTACGACGCGCTCGTC AACCTCGTCGCGAAGCCGGTCTCGCCGCAGGCCACGAAGGCCGCGCTGGTCACCGCCTAC TACCTCGTCAAGAACGACATCGAGCACGCCGCCTCCCGCCTCGTCGACCTCGGCACGGTG GAGCTCCTCGTCGAGCTCCTGGCCGACGCCGACAAGGGCACGACGGAGAAGGCGCTCGCG GTGCTCGACACCGTCCTCGTCGCGGCCAAGGCCCGCGACAGGGCGTACGCGCACGCGCTG GCCGTGCCGGTGCTCGCCAAGAAGACGATGCACGTGTCCGACATGGCGACGGAGTTCGCC GTGTCGGCGCTGTGGCGGCTGTGCAAGAACTCGCCGGCGGACGGCGGGTGCAAGGCCGAG GCGCTGCAGGTCGGCGCGTTCCAGAAGCTTCTGCTGCTGCTCCAGCTCGGCTGCGACGGC GTCACCAAGGAGCGCGCCAGCGAGCTGCTCAGGCTTCTCAACGCGTCGCGAGACAGCACC GAGTGCATCGAGACGGCAGATTTCAAGGGGCTGAAGAGACCCTTCATTTGA

Peptide Sequence

PEP ID	Os02t0738200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30805988:30807610:-1 gene:Os02g0738200 transcript:Os02t0738200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 40, U-box protein 40 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0738200-01)
Sequence	MVTPMTRARARARAVRLAVSEIPLAVRRSARQQQQPPEPAADVPDHFLCPISLDMMRDPV TAPTGITYDRDGVEVWLERGRPTCPVTGRPLRPEELVPNHATRRMIQEWCVANRALGVER VPTPRVPVSAADAREILEGVAAAARRGDAAACGRMVARARALGKESERNRRCLASAGAER ALALAFSRLAAASTDQQAEARACALEEILAALVVFFPLDEESRRCIASPPSLDALVSILS HGEQVTRVSAVVVLREIASSCDNQCLEAMSKANAMYDALVNLVAKPVSPQATKAALVTAY YLVKNDIEHAASRLVDLGTVELLVELLADADKGTTEKALAVLDTVLVAAKARDRAYAHAL AVPVLAKKTMHVSDMATEFAVSALWRLCKNSPADGGCKAEALQVGAFQKLLLLLQLGCDG VTKERASELLRLLNASRDSTECIETADFKGLKRPFI

Transcript Sequence

Transcript ID	Os02t0738200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30805988:30807610:-1 gene:Os02g0738200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 40, U-box protein 40 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0738200-01)
Sequence	CCCAACTATCCCACTCGCCCCCGCGCGCGCACGCCGCACTTGAAAAAACAACAATAACAA CACGTCAAATCGGCGCACGAAATGGTCACTCCGATGACTCGCGCCCGCGCCCGCGCCCGC GCCGTGCGGCTGGCCGTGTCGGAGATCCCTCTCGCCGTGCGGCGATCGGCGAGGCAGCAG CAGCAGCCGCCTGAGCCAGCCGCAGACGTGCCGGACCATTTCTTGTGCCCGATCTCGCTG GACATGATGAGGGACCCCGTGACGGCGCCGACGGGGATCACGTACGACCGGGACGGGGTG GAGGTGTGGCTGGAGCGCGGGCGGCCGACGTGCCCCGTCACCGGCCGCCCGCTGCGGCCG GAGGAGCTGGTGCCGAACCATGCCACGCGGAGGATGATCCAGGAGTGGTGCGTCGCGAAC CGGGCCCTCGGGGTGGAGCGCGTGCCCACGCCGCGGGTGCCCGTTTCCGCCGCCGACGCG CGCGAGATCCTCGAGGGCGTCGCCGCGGCGGCGCGGCGAGGGGACGCGGCGGCGTGCGGG AGGATGGTGGCCAGGGCTAGGGCGCTCGGGAAGGAGAGCGAGCGGAATCGCCGGTGCTTG GCGTCCGCCGGCGCCGAGCGCGCGCTCGCGCTCGCGTTCTCTCGTCTCGCCGCGGCGTCC ACCGACCAGCAGGCGGAGGCGCGCGCCTGCGCCCTCGAGGAGATCTTGGCCGCGCTGGTC GTCTTCTTCCCGCTCGACGAGGAGTCCAGGCGCTGCATTGCCTCCCCGCCGTCGCTGGAC GCCCTCGTCTCGATCCTCTCTCACGGCGAGCAGGTCACGCGTGTCAGCGCCGTCGTTGTG CTCCGGGAGATCGCCTCGTCGTGCGACAACCAGTGCCTCGAGGCAATGTCCAAGGCGAAC GCCATGTACGACGCGCTCGTCAACCTCGTCGCGAAGCCGGTCTCGCCGCAGGCCACGAAG GCCGCGCTGGTCACCGCCTACTACCTCGTCAAGAACGACATCGAGCACGCCGCCTCCCGC CTCGTCGACCTCGGCACGGTGGAGCTCCTCGTCGAGCTCCTGGCCGACGCCGACAAGGGC ACGACGGAGAAGGCGCTCGCGGTGCTCGACACCGTCCTCGTCGCGGCCAAGGCCCGCGAC AGGGCGTACGCGCACGCGCTGGCCGTGCCGGTGCTCGCCAAGAAGACGATGCACGTGTCC GACATGGCGACGGAGTTCGCCGTGTCGGCGCTGTGGCGGCTGTGCAAGAACTCGCCGGCG GACGGCGGGTGCAAGGCCGAGGCGCTGCAGGTCGGCGCGTTCCAGAAGCTTCTGCTGCTG CTCCAGCTCGGCTGCGACGGCGTCACCAAGGAGCGCGCCAGCGAGCTGCTCAGGCTTCTC AACGCGTCGCGAGACAGCACCGAGTGCATCGAGACGGCAGATTTCAAGGGGCTGAAGAGA CCCTTCATTTGAGTGTGCAGAGAGATCGATTAATTAGCTAGGTCAAGAACACAATCAAAG ATGTGGATACTAAGATGCACATACAATTAGGTTTAGATATCATCCTTCATTTGAAAATGA GTACAGACCGTATTTGGCAGTGGTACAAATACATGCCAGAATTAACTGAGAAAATTATGG CTC