Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0732700-03
CDS Infomation

cds chromosome:IRGSP-1.0:2:30542197:30548229:-1 gene:Os02g0732700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 23_1 description:Mediator complex, subunit Med23 domain containing protein. (Os02t0732700-01);Similar to F26F24.8. (Os02t0732700-02);Similar to F26F24.8. (Os02t0732700-03)
Sequence

ATATCAATGATTAAAGTCAAACGTGGAGAGCATCGTCTTTTTAGATTAGCAGAAAATTTG
TGCATGAATTTGATTCTCTCACTAAGAGACTTCTTTTTGGTGAAAAAAGAATTGAAGGGT
CCAACTGAGTTTACTGAAACACTTAACCGCATAACGATAATAAGCCTTGCTATCACCATG
AAGACACGTGGAATTGCTGAGGTCGAACATATAATTCATCTTCAACCATTATTAGAGCAA
ATTATGGCAACGAGCCAGCATACATGGTCAGAGAAGACTCTAAGATATTTTCCTCCCCTT
ATTCGAGATTTTTTAATGGGGAGGATGGATAAGAGAGGCCAAGCTATCCAAGCATGGCAG
CAGGCTGAGACAACTGTTATTAATCAATGTAATCAGCTACTCTCACCATCTGCTGAGCCA
ACCTATGTTATGACATATTTAAGTCACAGTTTCCCTCAGCATCGTCAATATCTTTGTGCT
GGTGCTTGGATGCTGATGAACGGACATCTAGAGATCAACAGTGCAAATCTTGCCCGTGTT
TTGAGAGAGTTTTCACCCGAAGAAGTTACAGCAAATATTTATACAATGGTTGATGTTCTT
CTGCATCATATCCAACTTGAGCTGCAAAGAGGGCATCAAATTCAGGACTTACTCTCTAAA
GCAATTACGAATCTTGCTTTCTTTATCTGGACACATGAGTTACTTCCATTGGACATTCTT
CTGTTAGCTCTTATTGATAGAGATGATGATCCTTATGCTTTACGCCTTGTGATAAATCTC
CTTGAAAGACCGGAACTTCAGCAAAGAATTAAAGCATTCTGCACTTCGCGTTCTCCAGAG
CATTGGCTAAAAAATCAGCCTCCAAAAAGAGTAGAACTTCAGAAAGCCCTCGGTAACCAT
CTCTCAGGGAAAGAACGTTACCCCCCCTTTTTTGATGACATTGCTGCTCGTCTGCTTCTA
GTCATCCCGTTGATAATTTATAGGCTTATTGAGAACGATGCCACAGATATCGCAGATAGA
GTCCTTGCAGTTTATTCTACCTTTCTGGCCTTCCATCCTCTAAGGTTTACATTTGTGCGT
GATATTCTTGCATATTTCTATGGTCATCTTCCATCCAAGTTAATTGTTAGGATCCTCAAC
GTGCTGGGTGTTAGCACTAAGACACCTTTCTCAGAATCATTTGCCCAGTATCTAGCGTCA
TCAAATTCATCTATTTGTCCACCACCGGAATACTTCGCCAACCTTTTGTTTGGCCTTGTT
AATAATGTCATACCTCCTTTGAGTTGCAAGTCCAAATCAAACCCATCGGATGCTGCTGGC
AGTACAGCACGCACAACTTATAACAAGCCTTATACATCTTCCGCTGGAGGAATCAGTAAC
TCTGATGGTCAGAGGGCATTTTATCAAAATCAGGATCCTGGATCATATACACAGCTTGTT
TTGGAAACAGCAGCCATTGAAATTCTCTCACTTTGTGTGCCAGCTTCTCAAATAGTATCC
TCTCTAGTTCAAATAATAGCACATGTACAAGCAATGCTCATACAGTCAAATAGTGGTCAT
GGAATGTCAGGTGGTTTGGGCCAAAACTCTGGGGTGCCGACTTCTTCAGGTGGGGGAGTT
GAACCTGTTGGTGCCAACCGACCAAACACCACAGCAAGTGGAATCAATGCATCTAACTTT
GTTTCTAGAAGTGGCTATTCCTGCCAACAATTGTCTGTTCTGATGATTCAAGCTTGTGGT
CTGTTGCTGGCACAACTCCCACCAGAATTCCACACACTTCTATATGCAGAAGCAGCCCGG
ATCATAAAAGATTGTTGGTGGCTTGCTGATAGTTCAAGGCCTGTTAAAGAGCTTGATTCT
GCTGTTGGGTATGCACTGTTGGATCCTACTTGGGCTTCTCAAGACAATACATCTACAGCC
ATAGGTAACATCGTTGCCCTTCTTCACTCGTTTTTCAGCAATCTTCCACATGAATGGCTT
GAATCTACCCATACCGTCATCAAGCATCTTCGGCCAGTCAACTCAGTTGCCATGTTAAGA
ATTGCTTTCCGCATATTGGGTCCCTTGTTGCCTCGTCTAGCCTTTGCTCGACCTCTGTTC
ATGAAGACCTTGGCTTTGCTGTTCAATGTGTTGGGGGATGTATTTGGGAAGAATTCTCAG
GCTTCACCTCCTGTGGAGGCATCGGAAATTGCTGACATAATTGACTTCTTGCACCATGCA
GTCATGTATGAGGGTCAAGGAGGTCCCGTTCAGAGCACTAGCAAGCCCAAACTAGAGATA
TTGACGTTATGTGGGAAAGTAATGGAAATTCTGAGGCCAGATGTGCAACATCTTCTATCC
CACCTGAAGACTGATCCAAACTCTTCAGTTTACGCAGCTACTCACCCCAAGTTAGTTCAA
AACCCATCTTAG

Peptide Sequence

PEP ID

Os02t0732700-03
PEP Infomation

pep chromosome:IRGSP-1.0:2:30542197:30548229:-1 gene:Os02g0732700 transcript:Os02t0732700-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 23_1 description:Mediator complex, subunit Med23 domain containing protein. (Os02t0732700-01);Similar to F26F24.8. (Os02t0732700-02);Similar to F26F24.8. (Os02t0732700-03)
Sequence

ISMIKVKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITM
KTRGIAEVEHIIHLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQ
QAETTVINQCNQLLSPSAEPTYVMTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARV
LREFSPEEVTANIYTMVDVLLHHIQLELQRGHQIQDLLSKAITNLAFFIWTHELLPLDIL
LLALIDRDDDPYALRLVINLLERPELQQRIKAFCTSRSPEHWLKNQPPKRVELQKALGNH
LSGKERYPPFFDDIAARLLLVIPLIIYRLIENDATDIADRVLAVYSTFLAFHPLRFTFVR
DILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLASSNSSICPPPEYFANLLFGLV
NNVIPPLSCKSKSNPSDAAGSTARTTYNKPYTSSAGGISNSDGQRAFYQNQDPGSYTQLV
LETAAIEILSLCVPASQIVSSLVQIIAHVQAMLIQSNSGHGMSGGLGQNSGVPTSSGGGV
EPVGANRPNTTASGINASNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHTLLYAEAAR
IIKDCWWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWL
ESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQ
ASPPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLS
HLKTDPNSSVYAATHPKLVQNPS

Transcript Sequence

Transcript ID

Os02t0732700-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30542197:30548229:-1 gene:Os02g0732700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 23_1 description:Mediator complex, subunit Med23 domain containing protein. (Os02t0732700-01);Similar to F26F24.8. (Os02t0732700-02);Similar to F26F24.8. (Os02t0732700-03)
Sequence

AATATCAATGATTAAAGTCAAACGTGGAGAGCATCGTCTTTTTAGATTAGCAGAAAATTT
GTGCATGAATTTGATTCTCTCACTAAGAGACTTCTTTTTGGTGAAAAAAGAATTGAAGGG
TCCAACTGAGTTTACTGAAACACTTAACCGCATAACGATAATAAGCCTTGCTATCACCAT
GAAGACACGTGGAATTGCTGAGGTCGAACATATAATTCATCTTCAACCATTATTAGAGCA
AATTATGGCAACGAGCCAGCATACATGGTCAGAGAAGACTCTAAGATATTTTCCTCCCCT
TATTCGAGATTTTTTAATGGGGAGGATGGATAAGAGAGGCCAAGCTATCCAAGCATGGCA
GCAGGCTGAGACAACTGTTATTAATCAATGTAATCAGCTACTCTCACCATCTGCTGAGCC
AACCTATGTTATGACATATTTAAGTCACAGTTTCCCTCAGCATCGTCAATATCTTTGTGC
TGGTGCTTGGATGCTGATGAACGGACATCTAGAGATCAACAGTGCAAATCTTGCCCGTGT
TTTGAGAGAGTTTTCACCCGAAGAAGTTACAGCAAATATTTATACAATGGTTGATGTTCT
TCTGCATCATATCCAACTTGAGCTGCAAAGAGGGCATCAAATTCAGGACTTACTCTCTAA
AGCAATTACGAATCTTGCTTTCTTTATCTGGACACATGAGTTACTTCCATTGGACATTCT
TCTGTTAGCTCTTATTGATAGAGATGATGATCCTTATGCTTTACGCCTTGTGATAAATCT
CCTTGAAAGACCGGAACTTCAGCAAAGAATTAAAGCATTCTGCACTTCGCGTTCTCCAGA
GCATTGGCTAAAAAATCAGCCTCCAAAAAGAGTAGAACTTCAGAAAGCCCTCGGTAACCA
TCTCTCAGGGAAAGAACGTTACCCCCCCTTTTTTGATGACATTGCTGCTCGTCTGCTTCT
AGTCATCCCGTTGATAATTTATAGGCTTATTGAGAACGATGCCACAGATATCGCAGATAG
AGTCCTTGCAGTTTATTCTACCTTTCTGGCCTTCCATCCTCTAAGGTTTACATTTGTGCG
TGATATTCTTGCATATTTCTATGGTCATCTTCCATCCAAGTTAATTGTTAGGATCCTCAA
CGTGCTGGGTGTTAGCACTAAGACACCTTTCTCAGAATCATTTGCCCAGTATCTAGCGTC
ATCAAATTCATCTATTTGTCCACCACCGGAATACTTCGCCAACCTTTTGTTTGGCCTTGT
TAATAATGTCATACCTCCTTTGAGTTGCAAGTCCAAATCAAACCCATCGGATGCTGCTGG
CAGTACAGCACGCACAACTTATAACAAGCCTTATACATCTTCCGCTGGAGGAATCAGTAA
CTCTGATGGTCAGAGGGCATTTTATCAAAATCAGGATCCTGGATCATATACACAGCTTGT
TTTGGAAACAGCAGCCATTGAAATTCTCTCACTTTGTGTGCCAGCTTCTCAAATAGTATC
CTCTCTAGTTCAAATAATAGCACATGTACAAGCAATGCTCATACAGTCAAATAGTGGTCA
TGGAATGTCAGGTGGTTTGGGCCAAAACTCTGGGGTGCCGACTTCTTCAGGTGGGGGAGT
TGAACCTGTTGGTGCCAACCGACCAAACACCACAGCAAGTGGAATCAATGCATCTAACTT
TGTTTCTAGAAGTGGCTATTCCTGCCAACAATTGTCTGTTCTGATGATTCAAGCTTGTGG
TCTGTTGCTGGCACAACTCCCACCAGAATTCCACACACTTCTATATGCAGAAGCAGCCCG
GATCATAAAAGATTGTTGGTGGCTTGCTGATAGTTCAAGGCCTGTTAAAGAGCTTGATTC
TGCTGTTGGGTATGCACTGTTGGATCCTACTTGGGCTTCTCAAGACAATACATCTACAGC
CATAGGTAACATCGTTGCCCTTCTTCACTCGTTTTTCAGCAATCTTCCACATGAATGGCT
TGAATCTACCCATACCGTCATCAAGCATCTTCGGCCAGTCAACTCAGTTGCCATGTTAAG
AATTGCTTTCCGCATATTGGGTCCCTTGTTGCCTCGTCTAGCCTTTGCTCGACCTCTGTT
CATGAAGACCTTGGCTTTGCTGTTCAATGTGTTGGGGGATGTATTTGGGAAGAATTCTCA
GGCTTCACCTCCTGTGGAGGCATCGGAAATTGCTGACATAATTGACTTCTTGCACCATGC
AGTCATGTATGAGGGTCAAGGAGGTCCCGTTCAGAGCACTAGCAAGCCCAAACTAGAGAT
ATTGACGTTATGTGGGAAAGTAATGGAAATTCTGAGGCCAGATGTGCAACATCTTCTATC
CCACCTGAAGACTGATCCAAACTCTTCAGTTTACGCAGCTACTCACCCCAAGTTAGTTCA
AAACCCATCTTAGTATTACAAGGCCATGGAGGAGAACTGACATATTTCAGTCGGAAAGAT
GGGAGGTTGTTCGAATGTGTTTCTAGAAGGCGAGATTCTAATTGCCGCTGCTTGTTAAAT
GAAAATTTGCTTGCTCCTTATGGCCATCACAAATTCATGAATGAAAATTAGCCTGTTAAA
TGAAAATTACAAGTTCATGAATGTTGTAAAATAGACCAGACCTCATCCCCTAGATCTTGC
TGGAGGGATAAAGGTTGATGATTTACAGTAGTTGTAACTAATAGCTTCATTAGGCCGGGA
TGTAGATTGAGATTGCCCTAGTGGTTAGAGAGAGACATTATTCTCCCGATCCATGTTTTC
ACTTTGTAGCTAGCGTTGTTGTACATGAATGTAAAATACTTGATTCAGAATTTATAACAT
AAACACCAAATTCTATC