Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0732200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30518062:30522415:1 gene:Os02g0732200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 9, U-box protein 9 description:Armadillo-like helical domain containing protein. (Os02t0732200-01)
Sequence	ATGGCGGCGGAGGCCGCGGCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGAT TTGGCTGCGGCCGCCGAGCCGCTGCGCGCGGACTGCCTCCGCCTCGCTCGGAAGGTCTCG CTGCTGTCGCACCTCGTCGCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGAC GCGGCGGATTCGTGGTTGGGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTC GAGCTCGGGCGCGCGCCGGCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAAC AATGTTGCTGTTCAGTTCAAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTT CCACAGAGCTGTTTTCAAATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCT CAGCTTCGAAGAGAAATGGAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTC CATGATATCTTAGCTCTTCATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGC CAGCCAGACACACCACAGATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATC ATTATGCTAGTTTCAGAAATAAGTGGGGTGCCCAAGTCTGACGCAGAGAGAATAACTTCT CAGCTAATTGAAGGACTTGAAAACATGAGAGTTACAGATTCTAAAAAACCTGTCAGTGTT AGCCAATCAAGTGATGAAACAAAAGCATCTCCTGAGACACATAAGAAGTCTGACGCCGTG GCTATTCCTGAAGATTTTCGATGCCCAATATCTCTTGAGCTGATGAGAGATCCTGTCATT GTTTCCACAGGACAGACCTACGAGCGTGCCTTCATCCAAAGGTGGATAGACTGTGGAAAC CGGACCTGTCCTAAAACTCAACTGAAGCTACAAAACATTACTCTGACCCCAAATTATGTT CTGCGAAGTTTGATATTGCAGTGGTGTGAGGAAAAAGGGATCGAACCACCTACCAGATCT AAGAACGATGGTGCATATCTTGAGGTTGGTGGGGAGAGAGTAGCTATTGAAACATTAGTT CGTAATCTCTCTAGTAGCTCATTAGATGAACGGAAATCGGCTGCTGCCGAAATAAGATCT TTGGCCAAGAAAAGCACTGACAATCGTATACTTCTAGCGGAATCTGGTGCAATATCCGCT CTAGTGAAACTTTTGTCCTCCAAAGACCTGAAAACCCAAGAACATGCAGTTACAGCTCTT CTGAATCTCTCCATATATGATCAGAACAAGGAACTGATAGTAGTTGCGGGTGCCATTGTC CCAATCATACAGGTGTTGAGGAAGGGGGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCT ATTTTCAGCTTGTCACTTATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCA ATTGAAGCATTAGTTGAGTTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCA ACAGCACTGTTCAACTTATGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGA ATCCTCGCACCACTGATTCAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAA GCACTAACAATCTTGTCAGTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAG GCTCATGCTATACCCTTTTTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAG AATGCTGCAGCCATCTTGCTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATA GGGAGGTTGGGTGCTCAAATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCC AAGCGCAAGGCAACCTCTCTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAA

Peptide Sequence

PEP ID	Os02t0732200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30518062:30522415:1 gene:Os02g0732200 transcript:Os02t0732200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 9, U-box protein 9 description:Armadillo-like helical domain containing protein. (Os02t0732200-01)
Sequence	MAAEAAAEIVREIAAVGAADLAAAAEPLRADCLRLARKVSLLSHLVAEVAEAGAGGGDAD AADSWLGDLVRALQAARRFVELGRAPARPSRASDQDAVCNNVAVQFKFVTWQLQTVLARL PQSCFQISDEVQEEVDLVRAQLRREMEKKGDIDVNIFSKFHDILALHVSTVGSQSEQSHG QPDTPQMENLCNGHLELQNIIMLVSEISGVPKSDAERITSQLIEGLENMRVTDSKKPVSV SQSSDETKASPETHKKSDAVAIPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGN RTCPKTQLKLQNITLTPNYVLRSLILQWCEEKGIEPPTRSKNDGAYLEVGGERVAIETLV RNLSSSSLDERKSAAAEIRSLAKKSTDNRILLAESGAISALVKLLSSKDLKTQEHAVTAL LNLSIYDQNKELIVVAGAIVPIIQVLRKGGMEARENAAAAIFSLSLIDDNKITIGSTPGA IEALVELLQSGSPRGRKDAATALFNLCIYQANKVRAVRAGILAPLIQMLQDSSRNGAIDE ALTILSVLVSHHECKIAIAKAHAIPFLIDLLRSSQARNKENAAAILLALCKKDAENLACI GRLGAQIPLTELSKTGTDRAKRKATSLLEHLSKLQVL

Transcript Sequence

Transcript ID	Os02t0732200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30518062:30522415:1 gene:Os02g0732200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 9, U-box protein 9 description:Armadillo-like helical domain containing protein. (Os02t0732200-01)
Sequence	ACGCTGCGCTGCTGCCACTGCACTACATTACGACGGGACGTTGACATTGGCGATGGCACC TCCCCTCCTCCTCCCCCTCCACGCGGCAGAGTCCTCCTGACCCACACGGCCGCGCCGCGC GCGCTGCGCCTGCTGAGGCGGGAGGGAGCGGGCCCGCCCGCGATGGCGGCGGAGGCCGCG GCGGAGATCGTGCGGGAGATCGCGGCGGTGGGCGCCGCCGATTTGGCTGCGGCCGCCGAG CCGCTGCGCGCGGACTGCCTCCGCCTCGCTCGGAAGGTCTCGCTGCTGTCGCACCTCGTC GCGGAGGTCGCCGAGGCGGGGGCCGGGGGTGGGGACGCGGACGCGGCGGATTCGTGGTTG GGGGATCTGGTCAGGGCGCTGCAGGCCGCCAGGAGGTTCGTCGAGCTCGGGCGCGCGCCG GCGCGACCGTCGAGGGCGTCGGATCAGGATGCCGTCTGCAACAATGTTGCTGTTCAGTTC AAGTTTGTGACTTGGCAGTTGCAAACAGTTCTAGCAAGACTTCCACAGAGCTGTTTTCAA ATATCAGATGAAGTTCAAGAAGAGGTTGATTTAGTGCGAGCTCAGCTTCGAAGAGAAATG GAGAAGAAAGGAGACATTGATGTAAACATTTTTTCAAAATTCCATGATATCTTAGCTCTT CATGTTAGTACTGTTGGATCGCAGTCTGAGCAATCACATGGCCAGCCAGACACACCACAG ATGGAAAACTTATGCAACGGTCATCTGGAGTTGCAAAATATCATTATGCTAGTTTCAGAA ATAAGTGGGGTGCCCAAGTCTGACGCAGAGAGAATAACTTCTCAGCTAATTGAAGGACTT GAAAACATGAGAGTTACAGATTCTAAAAAACCTGTCAGTGTTAGCCAATCAAGTGATGAA ACAAAAGCATCTCCTGAGACACATAAGAAGTCTGACGCCGTGGCTATTCCTGAAGATTTT CGATGCCCAATATCTCTTGAGCTGATGAGAGATCCTGTCATTGTTTCCACAGGACAGACC TACGAGCGTGCCTTCATCCAAAGGTGGATAGACTGTGGAAACCGGACCTGTCCTAAAACT CAACTGAAGCTACAAAACATTACTCTGACCCCAAATTATGTTCTGCGAAGTTTGATATTG CAGTGGTGTGAGGAAAAAGGGATCGAACCACCTACCAGATCTAAGAACGATGGTGCATAT CTTGAGGTTGGTGGGGAGAGAGTAGCTATTGAAACATTAGTTCGTAATCTCTCTAGTAGC TCATTAGATGAACGGAAATCGGCTGCTGCCGAAATAAGATCTTTGGCCAAGAAAAGCACT GACAATCGTATACTTCTAGCGGAATCTGGTGCAATATCCGCTCTAGTGAAACTTTTGTCC TCCAAAGACCTGAAAACCCAAGAACATGCAGTTACAGCTCTTCTGAATCTCTCCATATAT GATCAGAACAAGGAACTGATAGTAGTTGCGGGTGCCATTGTCCCAATCATACAGGTGTTG AGGAAGGGGGGCATGGAGGCAAGAGAAAATGCAGCTGCAGCTATTTTCAGCTTGTCACTT ATTGATGATAACAAGATAACTATTGGAAGCACTCCAGGGGCAATTGAAGCATTAGTTGAG TTGCTGCAGAGTGGCAGTCCAAGGGGTAGAAAAGATGCAGCAACAGCACTGTTCAACTTA TGCATATACCAAGCAAACAAGGTCCGTGCAGTTCGAGCAGGAATCCTCGCACCACTGATT CAGATGCTGCAGGATTCATCCAGAAATGGAGCTATTGACGAAGCACTAACAATCTTGTCA GTTCTTGTGAGCCACCATGAGTGTAAAATTGCCATAGCGAAGGCTCATGCTATACCCTTT TTGATAGACTTGTTGAGGTCAAGTCAGGCCCGTAACAAGGAGAATGCTGCAGCCATCTTG CTTGCCCTTTGCAAGAAGGATGCTGAGAACCTCGCTTGTATAGGGAGGTTGGGTGCTCAA ATACCACTAACTGAGCTGTCCAAGACCGGCACAGACAGAGCCAAGCGCAAGGCAACCTCT CTCCTGGAGCATCTCAGTAAGTTGCAGGTGCTCTAATTCCACTGTCCATCGCATACCATT TTGCGTGTGTGCGTGTTCTACATGTACGTATACATACGAAAAGCTGTAACCTCATCTCTT ATAGAGTGTGAATTTGGTGGGCCGGTAATGGGTTATTTCAGTTACCGGCTTACCCTCAAC CTCAAGTGTGCGTTCATTGATTGCTACATAAAAAAGGGTTGGTGTTACAGACTTGTGTAT TGTTGCTCATGGGCATGAAGTTTCTTTGAAGATCAAAAATGCAAAATTATTACGGTC