Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0730800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30444949:30448020:1 gene:Os02g0730800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORRM1 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0730800-01)
Sequence

ATGGACGCCGCCCGCGCCTCCCTCCTCTTGGCCGGCGGCCTCGCCGTATCCACCTCCACC
TCCGCCGTCGCCACTGCCGCCCAAACCGTCTCGATTCCTCACCTATCGCCGCACACCCGC
CGAAGGCGACAGCGCCGCTTCCTCCGCCTGGCCTCCGCTGCGGCGTCGTCTCCCCCGCCG
CTCCCCGCTGCTTCGGCGCAGCCGCATTGCTCTAGGTGGGTCGTGGTGATGGAGAGACCC
CCCGCGCCAGCGGGAGGCGGCGAGGTGTCCCGTGCGGAGGCCGTCGACCACTACGTCGCC
ACACTGGCCAGGGTATTGGGGAGCCAGGAGGAAGCACAGATGCGCATATACGATGCTTCG
TGGGATGGGAGCTACGAGTTCAGCTGCGAGATCGACGATGAAGCGTCAAGGGACCTTGCG
AAAATGCCCGGGGTATTAGCTGTTAAGCCAGATACGGATAAGGTTGATATGTCAGAGAAG
GATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGATGCTGTTTCC
AATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGAGAAGCCTGGG
GTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCTCATGAAAGTG
TTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGAGAGGGATTAT
GGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGTTTCTGGAGTG
TTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAAAGGTGATGAC
AGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGGCTTTTTGTTACA
GGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCCTTTTGGTGAA
CTAGTTGAAGTGAAGATAATAATGGACAAGATATCAAAAAGATCAAAAGGGTATGCTTTC
ATAGAATACACCACAGAAGAAGCTGGAGGTGCTGCTCTGAAAGCAATGAACGGACAGATA
ATAAATGGCTGGATGATAGTTGTCGATGTTGCTAAACATAGATCGAGGGACCGTCAACCC
CCGTATAGTGCATCAGGTAGATCCAATCAAGTGCTTCGATCGCGTTATCATACTGGATGA

Peptide Sequence

PEP ID

Os02t0730800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30444949:30448020:1 gene:Os02g0730800 transcript:Os02t0730800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORRM1 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0730800-01)
Sequence

MDAARASLLLAGGLAVSTSTSAVATAAQTVSIPHLSPHTRRRRQRRFLRLASAAASSPPP
LPAASAQPHCSRWVVVMERPPAPAGGGEVSRAEAVDHYVATLARVLGSQEEAQMRIYDAS
WDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGLSAANLGNFSDAVS
NHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEKDAQVSIYHISWERDY
GFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNYKGDDSFKSSEATQAEVKTKRLFVT
GLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKAMNGQI
INGWMIVVDVAKHRSRDRQPPYSASGRSNQVLRSRYHTG

Transcript Sequence

Transcript ID

Os02t0730800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30444949:30448020:1 gene:Os02g0730800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORRM1 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0730800-01)
Sequence

GGAGGAGAAGATGGACGCCGCCCGCGCCTCCCTCCTCTTGGCCGGCGGCCTCGCCGTATC
CACCTCCACCTCCGCCGTCGCCACTGCCGCCCAAACCGTCTCGATTCCTCACCTATCGCC
GCACACCCGCCGAAGGCGACAGCGCCGCTTCCTCCGCCTGGCCTCCGCTGCGGCGTCGTC
TCCCCCGCCGCTCCCCGCTGCTTCGGCGCAGCCGCATTGCTCTAGGTGGGTCGTGGTGAT
GGAGAGACCCCCCGCGCCAGCGGGAGGCGGCGAGGTGTCCCGTGCGGAGGCCGTCGACCA
CTACGTCGCCACACTGGCCAGGGTATTGGGGAGCCAGGAGGAAGCACAGATGCGCATATA
CGATGCTTCGTGGGATGGGAGCTACGAGTTCAGCTGCGAGATCGACGATGAAGCGTCAAG
GGACCTTGCGAAAATGCCCGGGGTATTAGCTGTTAAGCCAGATACGGATAAGGTTGATAT
GTCAGAGAAGGATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGA
TGCTGTTTCCAATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGA
GAAGCCTGGGGTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCT
CATGAAAGTGTTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGA
GAGGGATTATGGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGT
TTCTGGAGTGTTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAA
AGGTGATGACAGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGGCT
TTTTGTTACAGGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCC
TTTTGGTGAACTAGTTGAAGTGAAGATAATAATGGACAAGATATCAAAAAGATCAAAAGG
GTATGCTTTCATAGAATACACCACAGAAGAAGCTGGAGGTGCTGCTCTGAAAGCAATGAA
CGGACAGATAATAAATGGCTGGATGATAGTTGTCGATGTTGCTAAACATAGATCGAGGGA
CCGTCAACCCCCGTATAGTGCATCAGGTAGATCCAATCAAGTGCTTCGATCGCGTTATCA
TACTGGATGAACAAAGCATGACACCTAGAGATTAGACACAAGATTAGCAGTGAGTACGAA
GTAGAAACCATAGTTTTCCGGTGGTGTTGTATTTTTGCGTGGCCTGCTATTCTAATGTTT
CCAAGAGATGATAGCGGGCTACAGATTCCATAAGTTTAGTAATATCTAACATGTACTGGA
TTGATGCAATATCTTTTGATACTGCATTGGTAATATGAGCTTGAATAGATAATCTCATGT
AACATATTTCTATCAACAAATAATGTGAAAAAAAGAGATGTGATTAAT