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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0730050-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:30392816:30395045:1 gene:Os02g0730050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os02t0730050-00)
Sequence

ATGAAAGGAGACAACTCCAACGTCTTCCTCGTCGCCGGCCTCTCGCTGGTGGTCGTCGTC
CATGTCCTCGTGCTCCTATGGGCGCTGTGGTGGGGATACGGCCGCTCGCGCCTCGCCCTC
GCCCGCGCCCGCGTCGTCGGGCAGCACGACGTGGCGCGCGGCGGCCTCTCGGCGGAACAG
GTCGGCGAGCTGCCGTGCCACGTTGTCAAGGAGGGTGCCGGCGAGTGCGCGGTGTGCCTG
GAGGCGTTCCGGGCGGGCGACCGGCGCCGGGTGCTGCCGAGGTGCGAGCACGGCTTCCAC
GCGCAGTGCGTCGACTCGTGGCTGCGCGTGAGCCGCCTGTGCCCCATCTGCCGCGCCGAG
GTGGCCGCCAGCCGCGGCAAGGAAGGTGACGCGCCGACGACGTTGAGAACGCCGTCGGGG
AGGCCAGCCTCGTGGAGCAGGCTGGCGACGAAGAGCGCGGAGAGCGGCGTCTGCTCGGCG
GTCTTGAGCACGACGGCGTTGCCGCAGGCGAGCGCCGGGCCGACCTTCCAGGCGAACATG
AGCAGCGGGAAGTTCCAGGGGATGATCTGCCCGGCCACGCCGATGGGCTCGTGTAGCACC
TGCACGTGGTGTGGCCCATCCGCCGGCACGACGAGGCCGTGGATCTTGTCCGCCCACCCG
CCGTAG

Peptide Sequence

PEP ID

Os02t0730050-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:30392816:30395045:1 gene:Os02g0730050 transcript:Os02t0730050-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os02t0730050-00)
Sequence

MKGDNSNVFLVAGLSLVVVVHVLVLLWALWWGYGRSRLALARARVVGQHDVARGGLSAEQ
VGELPCHVVKEGAGECAVCLEAFRAGDRRRVLPRCEHGFHAQCVDSWLRVSRLCPICRAE
VAASRGKEGDAPTTLRTPSGRPASWSRLATKSAESGVCSAVLSTTALPQASAGPTFQANM
SSGKFQGMICPATPMGSCSTCTWCGPSAGTTRPWILSAHPP

Transcript Sequence

Transcript ID

Os02t0730050-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30392816:30395045:1 gene:Os02g0730050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os02t0730050-00)
Sequence

ATGAAAGGAGACAACTCCAACGTCTTCCTCGTCGCCGGCCTCTCGCTGGTGGTCGTCGTC
CATGTCCTCGTGCTCCTATGGGCGCTGTGGTGGGGATACGGCCGCTCGCGCCTCGCCCTC
GCCCGCGCCCGCGTCGTCGGGCAGCACGACGTGGCGCGCGGCGGCCTCTCGGCGGAACAG
GTCGGCGAGCTGCCGTGCCACGTTGTCAAGGAGGGTGCCGGCGAGTGCGCGGTGTGCCTG
GAGGCGTTCCGGGCGGGCGACCGGCGCCGGGTGCTGCCGAGGTGCGAGCACGGCTTCCAC
GCGCAGTGCGTCGACTCGTGGCTGCGCGTGAGCCGCCTGTGCCCCATCTGCCGCGCCGAG
GTGGCCGCCAGCCGCGGCAAGGAAGGTGACGCGCCGACGACGTTGAGAACGCCGTCGGGG
AGGCCAGCCTCGTGGAGCAGGCTGGCGACGAAGAGCGCGGAGAGCGGCGTCTGCTCGGCG
GTCTTGAGCACGACGGCGTTGCCGCAGGCGAGCGCCGGGCCGACCTTCCAGGCGAACATG
AGCAGCGGGAAGTTCCAGGGGATGATCTGCCCGGCCACGCCGATGGGCTCGTGTAGCACC
TGCACGTGGTGTGGCCCATCCGCCGGCACGACGAGGCCGTGGATCTTGTCCGCCCACCCG
CCGTAG