Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0729700-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:30381800:30383486:1 gene:Os02g0729700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 16 description:Similar to HAHB-7 (Fragment). (Os02t0729700-01);Similar to HAHB-7 (Fragment). (Os02t0729700-02)
Sequence	ATGGAGTCCGGCCGGCTCATCTTCAGCACGGCGGGCTCCGGCGCCGGGCAGATGCTCTTC TTGGACTGCGGCGCTGGCGGCGGCGGCGTCGGCGGCGGGGCCATGTTCCATCGAGGGGCG AGACCGGTGCTCGGCATGGAGGAAGGAGGGCGCGGCGTCAAGCGGCCCTTCTTCACCACC CCCGACGAGCTCCTCGAAGAGGAGTACTACGACGAGCAGCTCCCGGAGAAGAAGCGGCGC CTCACGCCGGAGCAGGTGCATCTGCTGGAGAGGAGCTTCGAGGAGGAGAACAAGCTGGAG CCGGAGCGGAAGACGGAGCTGGCGCGGAAGCTAGGGCTGCAGCCGCGGCAGGTCGCCGTG TGGTTCCAGAACCGCCGCGCGCGCTGGAAGACCAAGCAGCTCGAGCGCGACTTCGACCGC CTCAAGGCGTCGTTCGACGCCCTCCGCGCCGACCACGACGCCCTCCTCCAGGACAACCAC CGCCTCCACTCTCAGGTCATGTCGTTGACCGAGAAGCTGCAAGAGAAGGAGACGACGACC GAGGGCAGCGCCGGCGCGGCCGTTGACGTCCCGGGCTTGCCTGCGGCGGCCGACGTGAAG GTCGCCGTCCCGGACGCCGAGGAACCGGCGCTGGAGGAGGCGGCGGCGGCGTTCGAGGAG CAGCAGGAGCAGCAGGTGAAGGCCGAGGACAGGCTGAGCACGGGCAGCGGCGGGAGCGCG GTGGTGGACACGGACGCGCAACTGGTGGTCGGGTGCGGCCGGCAGCATCTCGCCGCCGTG GACAGCAGCGTGGAGTCGTACTTCCCGGGCGGCGACGAGTACCACGACTGCGTGATGGGC CCCATGGACCACGCCGCGGGGGGCATCCAGTCGGAGGAGGACGACGGCGCCGGCAGCGAC GAGGGCTGCAGCTACTACGCCGACGACGCCGGCGTCCTCTTCGCCGACCACGGCCACCAC CACCACCACCAACACGCGGACGACGACGAGGAGGACGGCCAGCAGATCAGCTGCTGGTGG ATGTGGAACTAG

Peptide Sequence

PEP ID	Os02t0729700-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:30381800:30383486:1 gene:Os02g0729700 transcript:Os02t0729700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 16 description:Similar to HAHB-7 (Fragment). (Os02t0729700-01);Similar to HAHB-7 (Fragment). (Os02t0729700-02)
Sequence	MESGRLIFSTAGSGAGQMLFLDCGAGGGGVGGGAMFHRGARPVLGMEEGGRGVKRPFFTT PDELLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAV WFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTT EGSAGAAVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSA VVDTDAQLVVGCGRQHLAAVDSSVESYFPGGDEYHDCVMGPMDHAAGGIQSEEDDGAGSD EGCSYYADDAGVLFADHGHHHHHQHADDDEEDGQQISCWWMWN

Transcript Sequence

Transcript ID	Os02t0729700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30381800:30383486:1 gene:Os02g0729700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 16 description:Similar to HAHB-7 (Fragment). (Os02t0729700-01);Similar to HAHB-7 (Fragment). (Os02t0729700-02)
Sequence	TAAGGCGCGCGATCTCGATCTCTAGCGTTGAGAACTTGATCCGCGATGGAGTCCGGCCGG CTCATCTTCAGCACGGCGGGCTCCGGCGCCGGGCAGATGCTCTTCTTGGACTGCGGCGCT GGCGGCGGCGGCGTCGGCGGCGGGGCCATGTTCCATCGAGGGGCGAGACCGGTGCTCGGC ATGGAGGAAGGAGGGCGCGGCGTCAAGCGGCCCTTCTTCACCACCCCCGACGAGCTCCTC GAAGAGGAGTACTACGACGAGCAGCTCCCGGAGAAGAAGCGGCGCCTCACGCCGGAGCAG GTGCATCTGCTGGAGAGGAGCTTCGAGGAGGAGAACAAGCTGGAGCCGGAGCGGAAGACG GAGCTGGCGCGGAAGCTAGGGCTGCAGCCGCGGCAGGTCGCCGTGTGGTTCCAGAACCGC CGCGCGCGCTGGAAGACCAAGCAGCTCGAGCGCGACTTCGACCGCCTCAAGGCGTCGTTC GACGCCCTCCGCGCCGACCACGACGCCCTCCTCCAGGACAACCACCGCCTCCACTCTCAG GTCATGTCGTTGACCGAGAAGCTGCAAGAGAAGGAGACGACGACCGAGGGCAGCGCCGGC GCGGCCGTTGACGTCCCGGGCTTGCCTGCGGCGGCCGACGTGAAGGTCGCCGTCCCGGAC GCCGAGGAACCGGCGCTGGAGGAGGCGGCGGCGGCGTTCGAGGAGCAGCAGGAGCAGCAG GTGAAGGCCGAGGACAGGCTGAGCACGGGCAGCGGCGGGAGCGCGGTGGTGGACACGGAC GCGCAACTGGTGGTCGGGTGCGGCCGGCAGCATCTCGCCGCCGTGGACAGCAGCGTGGAG TCGTACTTCCCGGGCGGCGACGAGTACCACGACTGCGTGATGGGCCCCATGGACCACGCC GCGGGGGGCATCCAGTCGGAGGAGGACGACGGCGCCGGCAGCGACGAGGGCTGCAGCTAC TACGCCGACGACGCCGGCGTCCTCTTCGCCGACCACGGCCACCACCACCACCACCAACAC GCGGACGACGACGAGGAGGACGGCCAGCAGATCAGCTGCTGGTGGATGTGGAACTAGATT TCTCGCGCGCGCGCGTCGTCGTGCATTCAATTCTCGTGTTAAAAAAATCGTTCTCTTTTT CATTTTTCCGCTTCTTTGTCTGTAATGTTGAGTTTCGATCGGCTATGAGAAGGAAGGAGG TGTATGCATGTGCATGGTATGGTAGGGTAACACATCGGTGAATCAAATCTGTCATGGTGA TGTACGAGAATTGAAGAACATGGGGGTAGCAATAAGTGCATGGAGGCAAGTACTCTTTTC AATGGCACATACCAAATCATGTCGTCGAATTGAGATTTTTATT