Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0729300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30352710:30356478:-1 gene:Os02g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC retroviral-type domain containing protein. (Os02t0729300-01)
Sequence	ATGCGGTTGGCGTCTCTGCCGCCGTCGTGGCCAGCACTCCAGCCGGCGCATCCCACGCTG CTCCGCCACCACAAACCAGTAATCCCCTCTCAACCCCTCTCTGGACCACCCCTTTCCCCA CGAAGCTCCACCCCACGCCGGAACCCCCAGTTCTGGCTGGAGTCGCCGCCGCCGCCGCCA TCCAGATCTGCTGTGCCTTTCTCCGCCGACGATGTCTCCCACGTCTCGGAGTCCCCGGAT CCAAGGAGTTCGCCCACGCCTGCTATGCCACGCTCCTTCGCTGATGCTGTCAGGTTGGAT TTCAATCCCGCCAAAGGAGACGGCCTGCCCGTTTTCAAATCCCCACACGGCCAACCACCG CCGCGCCCAAAATTGAAGTCCGCCATTACTATCCCAGCCTGGAGCACCTTTCAGCGTCGC GCCTACAGGGCTACTCCCGGAGAGGAAATGGGCGTGCGTCGCATCCATGGTACGGCGAGA CCAGGCCGCTTCAATGGCGAGTGGAAGGAAGTCAAGCCACGCCACTGGTGGCGCCGCTCG CCGCATTCACCCGAGTCCCAGCGGCCAGCTTCCAGGCGACAAGACGCACATTCAAGGCGC TCGTTGGCTCCCGCTGCATCGGCATCGCTGCGCCTCTTCAGAGAGAGAACGGCTGGAAAA TGCTTCAACTGCCTTGCGCGTGATCACCGCGCAGCGCGCTGCAGGGACCCGGTTCGTTGC TTCAGATGTTTCCGTTCGGGGCACAAGGCAAACTCCTGCTCCCGGCGTGAACCGCGACCA CGCCAACCTCGCCAGTCTCCACAGAAAGCGCTGCGCCGCCAAGCTTCTACACCACCCCCG CCACAGAACACGTCGCACCGCCAGGCTTCTACGCCATCCCCGTCTCTTCCCCGGGCTACA CGACCACGCCAACCACGCCAGTCTCCGCAGAACACGTCGTGCCGCCAAGCCTCCACACCA CCTCTGCAGCTACCTCTTCCACCCAAGCCGTCCTGCAACACGCGGATGGCTCTACTGGGA GACCCGGCGACCCGGCCGGATGAAGACCACTGCTTCGTTCCGACACCGTTCGCCACGGAG GCTGAGCGGAAAGAATGGGAAAGCTCGGCGGTGGTGTCCTGGGCGATGCGGGCACCGGCT TCCACAACGGCGCAAGATGTTGAGGCGGCTTTTCGGGAGGAATTCCGTCTTCGGCGAGGG GAGGTCACGGTGACGCGCCACCACCCGGAAGCCTTCCTGATCAAGTTCGAGCATAGCAGT CACTGCTATGAAGCTATGCGCAAGGGCTTCGTCAAGCGAAACGGTATTGAGCTCCACTTC ATCAAGTGGCGCAGCCTGAGTGCGGCCCTCGGCATCGCGCTCATGTTTCGCGTGCGCCTG TGTCTAGATGGTATCCCGCGGCACGCCTGA

Peptide Sequence

PEP ID	Os02t0729300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30352710:30356478:-1 gene:Os02g0729300 transcript:Os02t0729300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC retroviral-type domain containing protein. (Os02t0729300-01)
Sequence	MRLASLPPSWPALQPAHPTLLRHHKPVIPSQPLSGPPLSPRSSTPRRNPQFWLESPPPPP SRSAVPFSADDVSHVSESPDPRSSPTPAMPRSFADAVRLDFNPAKGDGLPVFKSPHGQPP PRPKLKSAITIPAWSTFQRRAYRATPGEEMGVRRIHGTARPGRFNGEWKEVKPRHWWRRS PHSPESQRPASRRQDAHSRRSLAPAASASLRLFRERTAGKCFNCLARDHRAARCRDPVRC FRCFRSGHKANSCSRREPRPRQPRQSPQKALRRQASTPPPPQNTSHRQASTPSPSLPRAT RPRQPRQSPQNTSCRQASTPPLQLPLPPKPSCNTRMALLGDPATRPDEDHCFVPTPFATE AERKEWESSAVVSWAMRAPASTTAQDVEAAFREEFRLRRGEVTVTRHHPEAFLIKFEHSS HCYEAMRKGFVKRNGIELHFIKWRSLSAALGIALMFRVRLCLDGIPRHA

Transcript Sequence

Transcript ID	Os02t0729300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30352710:30356478:-1 gene:Os02g0729300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, CCHC retroviral-type domain containing protein. (Os02t0729300-01)
Sequence	AGTTAATTTCCTGCAAGAAGGATGACTGAGTCAACAGGCGACCGGGCAGGCGATTCCCAC CGACCGACGGCCACTCCGGCCCCGGCGGCCACCCCCCTGCGCCGGTAGCCACCCCGGCGC CGACGCCCACCACCCACGCCTCTCTTGCCCCATCGCGCTTCCCCTGGAGCCTGCTCGACC GCCGCTCGACGTTGCTGGCCAGATGCGGTTGGCGTCTCTGCCGCCGTCGTGGCCAGCACT CCAGCCGGCGCATCCCACGCTGCTCCGCCACCACAAACCAGTAATCCCCTCTCAACCCCT CTCTGGACCACCCCTTTCCCCACGAAGCTCCACCCCACGCCGGAACCCCCAGTTCTGGCT GGAGTCGCCGCCGCCGCCGCCATCCAGATCTGCTGTGCCTTTCTCCGCCGACGATGTCTC CCACGTCTCGGAGTCCCCGGATCCAAGGAGTTCGCCCACGCCTGCTATGCCACGCTCCTT CGCTGATGCTGTCAGGTTGGATTTCAATCCCGCCAAAGGAGACGGCCTGCCCGTTTTCAA ATCCCCACACGGCCAACCACCGCCGCGCCCAAAATTGAAGTCCGCCATTACTATCCCAGC CTGGAGCACCTTTCAGCGTCGCGCCTACAGGGCTACTCCCGGAGAGGAAATGGGCGTGCG TCGCATCCATGGTACGGCGAGACCAGGCCGCTTCAATGGCGAGTGGAAGGAAGTCAAGCC ACGCCACTGGTGGCGCCGCTCGCCGCATTCACCCGAGTCCCAGCGGCCAGCTTCCAGGCG ACAAGACGCACATTCAAGGCGCTCGTTGGCTCCCGCTGCATCGGCATCGCTGCGCCTCTT CAGAGAGAGAACGGCTGGAAAATGCTTCAACTGCCTTGCGCGTGATCACCGCGCAGCGCG CTGCAGGGACCCGGTTCGTTGCTTCAGATGTTTCCGTTCGGGGCACAAGGCAAACTCCTG CTCCCGGCGTGAACCGCGACCACGCCAACCTCGCCAGTCTCCACAGAAAGCGCTGCGCCG CCAAGCTTCTACACCACCCCCGCCACAGAACACGTCGCACCGCCAGGCTTCTACGCCATC CCCGTCTCTTCCCCGGGCTACACGACCACGCCAACCACGCCAGTCTCCGCAGAACACGTC GTGCCGCCAAGCCTCCACACCACCTCTGCAGCTACCTCTTCCACCCAAGCCGTCCTGCAA CACGCGGATGGCTCTACTGGGAGACCCGGCGACCCGGCCGGATGAAGACCACTGCTTCGT TCCGACACCGTTCGCCACGGAGGCTGAGCGGAAAGAATGGGAAAGCTCGGCGGTGGTGTC CTGGGCGATGCGGGCACCGGCTTCCACAACGGCGCAAGATGTTGAGGCGGCTTTTCGGGA GGAATTCCGTCTTCGGCGAGGGGAGGTCACGGTGACGCGCCACCACCCGGAAGCCTTCCT GATCAAGTTCGAGCATAGCAGTCACTGCTATGAAGCTATGCGCAAGGGCTTCGTCAAGCG AAACGGTATTGAGCTCCACTTCATCAAGTGGCGCAGCCTGAGTGCGGCCCTCGGCATCGC GCTCATGTTTCGCGTGCGCCTGTGTCTAGATGGTATCCCGCGGCACGCCTGATCCGCCGA CATCGTCGAGCGGCTCATCGCGCGCACCTGTGGCCTCGAGGAGATCGAGACCAACCTGAT CCACCCGGTCGACACTCGCACGGTGGATGTGTGGGCTTGGACCGGCAATCCGAGCTCCAT CCCGAAGCGGATGTGGCTAACCTTTACCGGCTCGACGCGGGGAGCCAAACCAGAGCAAAT CCTGGTGTCCGACAGACCGCCGGCACACTGGCAACATGGCGCCAAATTCTGCGTCTACAT CCACCTGGAGGAGATCCACGACTACACGACGGTGGCGGTAGACCTCGATGGCAACGAGGC ATGCGCGCCCTCCAAGCGGCGCCTTCCGGAGTGGCACCTCGGCGTGGCCGACGGGGACCC GGTACCAACGCGAGCCTTCGAGAACTTCCCGCACCACCCGCCTCCACCACGCACTCGTCA AGGCCGCGAGCCAGAGCGCATCGACGACCGCGACGACCGTCGCCGAAGAGCCAAAGATGA TCGTGACCGGAGCCGTCCCAGGCGGTCGTATAATGACGACCACCCGGACCACGACAGGGA CCAAGCCTGGCGACGGCGCGACGACGACGACGACCGCGACGGCAGGGGCGGCCGGGGCCG CGAGGCATGGCGAGGACGAGAAAGCCGCAAAGTCTCGGGCCTTGATGGCCAACGCGTGCG CGAGCGTTCGCCGCGTCGGCGCGACTGGGCAGAGGACGACCGTCGCGGTGACCGGCGTCA TCACGTGCAGGCTGCTGTCGCCCTGCCTGCTACAATCCCGCCTCTCAAGCTCGCTCCGAA GCAGGTAACTGATTTTAAGATGTTGTTTTCCCTTAACTCCCACCCTCTTCAGGCACCAAG GGAAAACCTCCGTGAGACGGGGGAAAGGCTTGTGAACAGGGTGAACAATTTCGCCGCTGC GGTGGATGACGCTTCTCAGCCTGGCGGGGAAGAAGCCTGGTCCGACCGCCGGCCAAGTCG CGTCCATGACGTCCCGATCCGGCAGGTGTTCGACCGGCTCAAGCACTGCCTCTTCCCTGC TGGCATCCACTCTACACCAAGCCACTCGGGCCAAGTGATGCCTCATGACGAGAGGGCGTC GATCGGCGCGGTGGAAGAAGCACTTGCAGCACTTTAGCTCATGGCGGACGCGGGTCATGC CGTCGGCGAGCGAACGCCGCCATTTCCAACATCCCCCCTCCAGTGTGCTGGGCCATCACC AGTATGGGCCGGCCTCCTCCCGGACCTTGGGCTGCAGACAGGAGGGAGCTGTCACGCAAT GGGCCTGATGGGCCATGAAGACCTTCAGCCTGCCCTGCCGATGTCTACTTTCACAGGCTT GCAAGCGGGCCATGATACGGCCCACCCATCACCACCACAGGGCCAACAGGCTCGAACCGA CACCACGGCCACCATCAGCGAGGCAACACTGCAGCCGCCACGGCGGTTGCGTCGAAGACG GTGACGCCGCCGCAGCTGATTACAGCTGCGCCAACGACGGAACAAGATGAACACCAAGAT GCCGGGAATAAGAACACGCTGCAAGTGCTGGAGAGCCTCTTCTCCACCCCGCCGCGCGCC GTTTTGCCACGGCCGACCTCCCCTGCGCTGACGACGACCCAAGCGACCCCAGCGCCAGCA CCGGCGCCGCCAGGTGGCCACGGGATGGAGCGTCGCCGCAGCGCAAGACTCGCGGCAAAG CCGCCAATGCCAACTATGCAACGCTGCACGAGGGTGTTATTGAAGCGGCTTGGCATGCTC CATGACGACAAGACGCTCGACGAGGTGCTCTCCGACTACATCGCCATGTTCAATGGACCT CTACCGCAACACGTGATCGCAGCGCTCACGTCCATCTTCGACATCGACGCCGATGCAATC ATGGAAGCCAATCACGTCGACAACACGCTCCTGGAGGTTGTCGGCGAAGGCGTCGCTGAC CTTGTCGAGGAGGTTGCCGACACAGCGGCATGAACGGGAGGGTGGGCGCCCTGCTGAGTA CTCTGTCTTCTCCCCATGATTTCTACCCCAGATGAAAGTTTGTACCCTTTTGCTTGTGCA AAGACTCATAGTTTGCACCCTGCGGCTGCTGATGGAGCTTTTGCTAATCGTCGCATGTAT CCTGCGTGGGAAGCTGCCCTACATTTGGATGATTTACGTTTACGGAACT