Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0729100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:30343011:30344467:1 gene:Os02g0729100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 54 description:Protein of unknown function DUF231, plant domain containing protein. (Os02t0729100-00)
Sequence

ATGAAATCGCAGAAGAACAACCTGCCTCTTCCCAAGCGATCGGCTGCCATCGCTGCGCCG
ATCGCTCTCCTCCTAGTGGTCGGGCTCATCTCGCTCTATGACTTCACCTTCGCTGATCGC
TACCCGAACATTGACGCCGCCTCGTCATCGTCGTCGTCGTCGTCGTCGCCGTCTCCGGCC
ACCGTGAGTAAGTGCAACCTTACGCGGGGCGAGTGGGTGCCGGACGGCGAGGCGCCGTAC
TACACGAACCTGACGTGCCCGTTCATCGACGACCACCAGAACTGCATGAAGTTCGGCAAG
CCGAGCCTCGAGTACGTGAGCTGGAGGTGGAAGCCGGACGGGTGCGAGCTCCCCCGCTTC
GACGCCGCGAGGTTCTTGGAGGCCATGAGGGGCAAATCCATGGCGTTCGTCGGCGACTCG
CTCGCCAGGAACCACTTCAAGTCTTTGCTGTGCCTCTTGTCCAAGGTGGCGCAGCCGGTG
GAGCTCGTCGGCGCGGCTCCGGAGATCGACGTGACGGGGAGGGCGGTCCGGCGAGACTTC
CGGTACGACAGCCATGGCTTCACGGCTTCGCTCTTCTGGTCGCCCTTCCTGGTCAAGGCC
AACCTAGCGAACGCGACGCTCGGCTTGTGGGACCTCCACCTCGACACGGCGGACGCCCGG
TGGGCGGCGCACGTCGCCGAGTTCGACTACGTCGTCCTCTCGGACACCAACTGGTTCCTC
CGCCCGTCGGTGTACTACGAGGGCGGGCGCGCCGTCGGCCGCAACGGCGCCGCCCCCGTC
ACCAACGCGACCGAGATCGCCGTGCCCCGCGCCGTGCGCGCCGCGTTCAGCACGGCGCTC
GGCGCGCTCGCCGCGGCGCCGGGGACATTCCGAGGCAAGGCGATCCTCCGGTCGGTCACC
CCCGCGCACTTCGAGAACGGCGAGTGGAACACCGGCGGCGACTGCGTCCGCACCCGCCCG
TTCCGGCGCGACGAGCGCGCCCTGGGCGCCGTCGAGGCCGAGTACCTCGCCGTGCAGGTC
GACGCGGTCAGGGAGGCGGAGGCGGCGGTGAGGAGGAACGGCGGCGAGCTGCGGCTGCTG
GACATCACCGAGGCGATGGACCTGCGGCCGGACGGGCACCCGAGCCGGTACGGGCACCCG
CCGGGCGGCAGCGTGGAGGGCAGCTTCGTTGTGGATTGCCTGCATTGGTGCTTGCCGGGG
CCGATTGACCTGTGGAGCGAGCTGCTGTTCCACATGCTGGTTGATCAATAG

Peptide Sequence

PEP ID

Os02t0729100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:30343011:30344467:1 gene:Os02g0729100 transcript:Os02t0729100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 54 description:Protein of unknown function DUF231, plant domain containing protein. (Os02t0729100-00)
Sequence

MKSQKNNLPLPKRSAAIAAPIALLLVVGLISLYDFTFADRYPNIDAASSSSSSSSSPSPA
TVSKCNLTRGEWVPDGEAPYYTNLTCPFIDDHQNCMKFGKPSLEYVSWRWKPDGCELPRF
DAARFLEAMRGKSMAFVGDSLARNHFKSLLCLLSKVAQPVELVGAAPEIDVTGRAVRRDF
RYDSHGFTASLFWSPFLVKANLANATLGLWDLHLDTADARWAAHVAEFDYVVLSDTNWFL
RPSVYYEGGRAVGRNGAAPVTNATEIAVPRAVRAAFSTALGALAAAPGTFRGKAILRSVT
PAHFENGEWNTGGDCVRTRPFRRDERALGAVEAEYLAVQVDAVREAEAAVRRNGGELRLL
DITEAMDLRPDGHPSRYGHPPGGSVEGSFVVDCLHWCLPGPIDLWSELLFHMLVDQ

Transcript Sequence

Transcript ID

Os02t0729100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30343011:30344467:1 gene:Os02g0729100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 54 description:Protein of unknown function DUF231, plant domain containing protein. (Os02t0729100-00)
Sequence

CATGAAATCGCAGAAGAACAACCTGCCTCTTCCCAAGCGATCGGCTGCCATCGCTGCGCC
GATCGCTCTCCTCCTAGTGGTCGGGCTCATCTCGCTCTATGACTTCACCTTCGCTGATCG
CTACCCGAACATTGACGCCGCCTCGTCATCGTCGTCGTCGTCGTCGTCGCCGTCTCCGGC
CACCGTGAGTAAGTGCAACCTTACGCGGGGCGAGTGGGTGCCGGACGGCGAGGCGCCGTA
CTACACGAACCTGACGTGCCCGTTCATCGACGACCACCAGAACTGCATGAAGTTCGGCAA
GCCGAGCCTCGAGTACGTGAGCTGGAGGTGGAAGCCGGACGGGTGCGAGCTCCCCCGCTT
CGACGCCGCGAGGTTCTTGGAGGCCATGAGGGGCAAATCCATGGCGTTCGTCGGCGACTC
GCTCGCCAGGAACCACTTCAAGTCTTTGCTGTGCCTCTTGTCCAAGGTGGCGCAGCCGGT
GGAGCTCGTCGGCGCGGCTCCGGAGATCGACGTGACGGGGAGGGCGGTCCGGCGAGACTT
CCGGTACGACAGCCATGGCTTCACGGCTTCGCTCTTCTGGTCGCCCTTCCTGGTCAAGGC
CAACCTAGCGAACGCGACGCTCGGCTTGTGGGACCTCCACCTCGACACGGCGGACGCCCG
GTGGGCGGCGCACGTCGCCGAGTTCGACTACGTCGTCCTCTCGGACACCAACTGGTTCCT
CCGCCCGTCGGTGTACTACGAGGGCGGGCGCGCCGTCGGCCGCAACGGCGCCGCCCCCGT
CACCAACGCGACCGAGATCGCCGTGCCCCGCGCCGTGCGCGCCGCGTTCAGCACGGCGCT
CGGCGCGCTCGCCGCGGCGCCGGGGACATTCCGAGGCAAGGCGATCCTCCGGTCGGTCAC
CCCCGCGCACTTCGAGAACGGCGAGTGGAACACCGGCGGCGACTGCGTCCGCACCCGCCC
GTTCCGGCGCGACGAGCGCGCCCTGGGCGCCGTCGAGGCCGAGTACCTCGCCGTGCAGGT
CGACGCGGTCAGGGAGGCGGAGGCGGCGGTGAGGAGGAACGGCGGCGAGCTGCGGCTGCT
GGACATCACCGAGGCGATGGACCTGCGGCCGGACGGGCACCCGAGCCGGTACGGGCACCC
GCCGGGCGGCAGCGTGGAGGGCAGCTTCGTTGTGGATTGCCTGCATTGGTGCTTGCCGGG
GCCGATTGACCTGTGGAGCGAGCTGCTGTTCCACATGCTGGTTGATCAATAGTACTAGTA
TATACTCGTTCAAGT