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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0728600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30323406:30325666:-1 gene:Os02g0728600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 2. (Os02t0728600-01)
Sequence

AAAGCCCTAAAAACTCCAGAACCAACCAAAAGGCGCGCGAACACACGAGTCGGCGGCGGC
GCGGCGATGGGGAGCAACACGGAGGTGGAGAAGAAGAAGGCCCCAACGGCGCTCGCGCCC
ATCGCGAAGCCTCTCGCCGGCAAGAAGCTCTGCAAGCGAACCCTCAAGCTCGTCCGGCGA
GCATCGGAGGCCAAGTGCCTGAAGCGGGGAGTCAAGGAGGTGGTCAAGAGCATCCGTCGT
GGGAACAAAGGGTTGTGTGTAATTGCTGGGAATATTTCTCCTATCGATGTGATTACACAT
GTTCCAATACTTTGTGAGGAAGCTAATATTCCTTACATATATGTGCCATCAAAAGAGGAT
CTTGCTACTGCCGGGACTACTAAGAGGCCTACCTGTTGCGTCCTGGTTATGACCAAGCCT
GCCAAGGGGGAGATCAATGAAGAGGTGAAGGAGAAACTGAAGTCAGACTACGACCATGTT
GTAGCTGAAGTTGCAGAGGTTACATCTTCAATGTTCTGA

Peptide Sequence

PEP ID

Os02t0728600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30323406:30325666:-1 gene:Os02g0728600 transcript:Os02t0728600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 2. (Os02t0728600-01)
Sequence

KALKTPEPTKRRANTRVGGGAAMGSNTEVEKKKAPTALAPIAKPLAGKKLCKRTLKLVRR
ASEAKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKED
LATAGTTKRPTCCVLVMTKPAKGEINEEVKEKLKSDYDHVVAEVAEVTSSMF

Transcript Sequence

Transcript ID

Os02t0728600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30323406:30325666:-1 gene:Os02g0728600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 2. (Os02t0728600-01)
Sequence

AAAAGCCCTAAAAACTCCAGAACCAACCAAAAGGCGCGCGAACACACGAGTCGGCGGCGG
CGCGGCGATGGGGAGCAACACGGAGGTGGAGAAGAAGAAGGCCCCAACGGCGCTCGCGCC
CATCGCGAAGCCTCTCGCCGGCAAGAAGCTCTGCAAGCGAACCCTCAAGCTCGTCCGGCG
AGCATCGGAGGCCAAGTGCCTGAAGCGGGGAGTCAAGGAGGTGGTCAAGAGCATCCGTCG
TGGGAACAAAGGGTTGTGTGTAATTGCTGGGAATATTTCTCCTATCGATGTGATTACACA
TGTTCCAATACTTTGTGAGGAAGCTAATATTCCTTACATATATGTGCCATCAAAAGAGGA
TCTTGCTACTGCCGGGACTACTAAGAGGCCTACCTGTTGCGTCCTGGTTATGACCAAGCC
TGCCAAGGGGGAGATCAATGAAGAGGTGAAGGAGAAACTGAAGTCAGACTACGACCATGT
TGTAGCTGAAGTTGCAGAGGTTACATCTTCAATGTTCTGAGTACAACGCCCAGCCCCAGG
GCCATAGTAAATTAGTGATAGAAACCCAGGCACCATGGCTGCTCACATCTTTCTATATGT
ATTATGTGAACATGAAGGTTGCTCTACTAGTTTACCCCTGTCGGATCATGCTGTTTCTCT
GTTGATTAGCATAAGCTAGTCAATTGTAATGAAACCTGGTGAGCTGATCATTTACTCTCC
AGTAAG