Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0728100-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:30297219:30306139:-1 gene:Os02g0728100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protease IV 1, PROTEASE IV 1 description:Similar to SPPA; serine-type endopeptidase. (Os02t0728100-01);Peptidase S49 domain containing protein. (Os02t0728100-02)
Sequence	ATGGCGAGGCTACTCGTCCTCCGCTCGGCGCCGTACCACCGCTCCCACCTCTCCGCCACC GCCACGTTCCTCCTTTCCCCCTCCAACTCCAAGCACCCACACTCCGCCTCCGCCTCCGCC TCATTCCCCTCCACCGCGCGCCGAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGC GCCATCGAGTCCTCCCCCGGCACCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGT GAGGCCCAGGAGCCGCCGCCCCCCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGG GGGACCCAGCTCGCCGTGAAGCTACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGC AAGGGCAGCGTCCTTAACATGAAGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGC TTCTCTTCCGGGCTGTCATTGCCACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGAC CCGCGAATATCGGGGATCTATCTGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGTG GATGAGATCAGAAGACACATTGTCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTAT ATGCCTGTGTGTGGGGAGAAAGAGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCA CCGCCAAGTGCTTATGTTGCTTTGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGT GTTCTTGAGAAAGTCGGGATAGAACCAGAAATTCAGCGAATTGGTCGTTACAAAAGTGCG GGAGACCAACTTGCACGGAAGAGCATGTCAAATGAGGTTAGGGAGATGCTAGCCACACTG CTCGACAATATTTATGGAAACTGGCTGGATACAATATCTTCCAAACATGGGAAGAAAAAA GAAGAAATCGAGGAATTCATTAATTCAGGAGTCTATCAGGTTGCCAGACTTAAGGAAGAA GGTTGGATAACAGATTTACTTTATGATGATGAGGTCATGGCAATGTTGAAGGAGAGAGTA GCACAGAAAGACAAGAAAAGTCTGCGTATGGTTGATTACAGTAAATATTCACGTGTAAGT AAATGGACTCTTGGGTTACAAGGAGGGGGTGAACAAATTGCAGTGATCAGAGCATCTGGA AGCATAACACGTACTCGCAGCCCATTGAGTGTTCCTAGTTCAGGCATCATTGCTGAGCAG TTGATCGAGAAGATACGTACTGTTAGAGAGTCAGAAAAGTATAAAGCTGTTATCCTCCGT ATAGACAGCCCTGGTGGTGATGCTCTTGCTTCTGATCTGATGTGGCGGGAAATTCGACTC CTAGCTGACACCAAGCCTGTGGTTGCTTCAATGTCTGATGTTGCTGCAAGTGGTGGGTAC TACATGGCAATGGCTGCACCGGTCATTGTTGCTGAAAAACTCACGCTAACAGGATCAATT GGAGTTGTAACAGGGAAGTTCATCCTGCAAAAGCTATATGAGCGGATTGACTTCAATAAA GAAATTATATCTAAGGGTAGATATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGA CCAGATGAGGCAGAACTTTTTGAAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGAT AAAGCAGCCATGTCACGCTCAATGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGG GTGTGGAGTGGCCAAGATGCAGCTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCA CAAGCTCTTGCTATTGCAAAACAGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTA GTTGAGATCTCAAAGCCCTCACCAACATTACCAGAGATCTTGTCAGGAATTGGCAGTTCA TTGCTTGGAGTTGACAGGGCAGTGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGA GTCCAAGCTAGAATGGATGGAATATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAAT CAACTCTTATTGCTCGTAAAAGATATTGTTAATTATTTTGATTGA

Peptide Sequence

PEP ID	Os02t0728100-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:30297219:30306139:-1 gene:Os02g0728100 transcript:Os02t0728100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protease IV 1, PROTEASE IV 1 description:Similar to SPPA; serine-type endopeptidase. (Os02t0728100-01);Peptidase S49 domain containing protein. (Os02t0728100-02)
Sequence	MARLLVLRSAPYHRSHLSATATFLLSPSNSKHPHSASASASFPSTARRILLPSPLRVPAR AIESSPGTTKQEPTPAAGEGEAQEPPPPAASAFEVEELGWGTQLAVKLRMLVAPPWKRVR KGSVLNMKLRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIEPLRCGWGKV DEIRRHIVDFKKSGKFVVGYMPVCGEKEYYLACACGELYAPPSAYVALFGLTVQQTFLRG VLEKVGIEPEIQRIGRYKSAGDQLARKSMSNEVREMLATLLDNIYGNWLDTISSKHGKKK EEIEEFINSGVYQVARLKEEGWITDLLYDDEVMAMLKERVAQKDKKSLRMVDYSKYSRVS KWTLGLQGGGEQIAVIRASGSITRTRSPLSVPSSGIIAEQLIEKIRTVRESEKYKAVILR IDSPGGDALASDLMWREIRLLADTKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSI GVVTGKFILQKLYERIDFNKEIISKGRYAELNAADQRPLRPDEAELFEKSAQNAYALFRD KAAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSLGGFSQALAIAKQKANIPHDRKVQL VEISKPSPTLPEILSGIGSSLLGVDRAVKGVLQDVTSLNGVQARMDGILFERLEDLSGEN QLLLLVKDIVNYFD

Transcript Sequence

Transcript ID	Os02t0728100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30297219:30306139:-1 gene:Os02g0728100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protease IV 1, PROTEASE IV 1 description:Similar to SPPA; serine-type endopeptidase. (Os02t0728100-01);Peptidase S49 domain containing protein. (Os02t0728100-02)
Sequence	GCCGCGCTCCTTTTCCCTCGCACCACTCCACCCCCCTCATTCCCCCCCTACACCGCGACG GCCGACGAGGTCTCGGGCTCCCCGAAGCTTCCACAACAATGGCGAGGCTACTCGTCCTCC GCTCGGCGCCGTACCACCGCTCCCACCTCTCCGCCACCGCCACGTTCCTCCTTTCCCCCT CCAACTCCAAGCACCCACACTCCGCCTCCGCCTCCGCCTCATTCCCCTCCACCGCGCGCC GAATCCTACTCCCGTCGCCTCTCCGCGTCCCGGCCCGCGCCATCGAGTCCTCCCCCGGCA CCACAAAGCAGGAGCCGACTCCGGCTGCCGGTGAGGGTGAGGCCCAGGAGCCGCCGCCCC CCGCTGCGTCGGCGTTCGAGGTGGAGGAGCTCGGGTGGGGGACCCAGCTCGCCGTGAAGC TACGCATGCTCGTGGCCCCGCCATGGAAGCGCGTCCGCAAGGGCAGCGTCCTTAACATGA AGCTTCGGGGCGAGATATCCGATCAGTTGAAGACACGCTTCTCTTCCGGGCTGTCATTGC CACAAATCTGCGAGAATTTTGTTAAAGCTGCATATGACCCGCGAATATCGGGGATCTATC TGCACATAGAGCCTCTGAGATGTGGGTGGGGGAAGGTGGATGAGATCAGAAGACACATTG TCGATTTCAAGAAGTCCGGTAAATTTGTTGTTGGTTATATGCCTGTGTGTGGGGAGAAAG AGTACTACCTTGCTTGTGCGTGTGGTGAGCTGTATGCACCGCCAAGTGCTTATGTTGCTT TGTTTGGTCTAACTGTTCAGCAAACATTTCTCAGAGGTGTTCTTGAGAAAGTCGGGATAG AACCAGAAATTCAGCGAATTGGTCGTTACAAAAGTGCGGGAGACCAACTTGCACGGAAGA GCATGTCAAATGAGGTTAGGGAGATGCTAGCCACACTGCTCGACAATATTTATGGAAACT GGCTGGATACAATATCTTCCAAACATGGGAAGAAAAAAGAAGAAATCGAGGAATTCATTA ATTCAGGAGTCTATCAGGTTGCCAGACTTAAGGAAGAAGGTTGGATAACAGATTTACTTT ATGATGATGAGGTCATGGCAATGTTGAAGGAGAGAGTAGCACAGAAAGACAAGAAAAGTC TGCGTATGGTTGATTACAGTAAATATTCACGTGTAAGTAAATGGACTCTTGGGTTACAAG GAGGGGGTGAACAAATTGCAGTGATCAGAGCATCTGGAAGCATAACACGTACTCGCAGCC CATTGAGTGTTCCTAGTTCAGGCATCATTGCTGAGCAGTTGATCGAGAAGATACGTACTG TTAGAGAGTCAGAAAAGTATAAAGCTGTTATCCTCCGTATAGACAGCCCTGGTGGTGATG CTCTTGCTTCTGATCTGATGTGGCGGGAAATTCGACTCCTAGCTGACACCAAGCCTGTGG TTGCTTCAATGTCTGATGTTGCTGCAAGTGGTGGGTACTACATGGCAATGGCTGCACCGG TCATTGTTGCTGAAAAACTCACGCTAACAGGATCAATTGGAGTTGTAACAGGGAAGTTCA TCCTGCAAAAGCTATATGAGCGGATTGACTTCAATAAAGAAATTATATCTAAGGGTAGAT ATGCAGAGCTTAATGCTGCTGATCAACGCCCTTTAAGACCAGATGAGGCAGAACTTTTTG AAAAGTCAGCACAAAATGCTTATGCATTGTTTCGAGATAAAGCAGCCATGTCACGCTCAA TGAATGTTGATCAGATGGAGACTGTTGCACAAGGTCGGGTGTGGAGTGGCCAAGATGCAG CTTCAAGAGGATTGGTTGATTCACTGGGTGGATTCTCACAAGCTCTTGCTATTGCAAAAC AGAAAGCCAATATACCCCATGATAGGAAGGTCCAGCTAGTTGAGATCTCAAAGCCCTCAC CAACATTACCAGAGATCTTGTCAGGAATTGGCAGTTCATTGCTTGGAGTTGACAGGGCAG TGAAGGGAGTGCTCCAGGATGTCACTTCCCTAAATGGAGTCCAAGCTAGAATGGATGGAA TATTGTTTGAAAGATTGGAAGATTTGTCTGGAGAAAATCAACTCTTATTGCTCGTAAAAG ATATTGTTAATTATTTTGATTGATTCCACCAGTCAGTACCCTATGTTTTACAAACAGTTA TACATAGAAGAAGAAAATGTCAACATGTCAATAATAATTCACCTTACCTAGAGGCTAGAA GCAGGTAGACTTGGGATCCGTTCAGTACTTTTGGCACTGTATATTCTATTTTGTTCTTTT CATACTGCTGCCTATGGAAATGTTGTACATGCCTTACTGAAAATTCAAGCGATCTTGATT TTCTAGTTCGCTTGAACTGGAACCCAATAGATCACATTTACTCTTTGTTTATG