Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0727500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30276458:30279263:-1 gene:Os02g0727500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1754, eukaryotic domain containing protein. (Os02t0727500-01)
Sequence

CGTCCCCAAATCGGAAGCCGCCGAACCCTCGCTTCTCGGGGACGCGGAGCGGCCAGCCGG
CCACCTTCCACTGCCTCGAGCTCCTCTCCTTCTCCGGGTTGGTGTGGCGTGGAGATCCAT
CCTGGCCGACCTCTTTCGCTAGGCGAGATGTCTGAGTACCAGAACGTCGTTGGGGGTAGG
CTCAAGCTGAAGGGGAAGGCGCTGGATGTGAAGGAAGGGGGAGTCAAGAAGAAGAAAAAG
AAGAAGCAGCACCGCGAGGAGTCATCTGAAGCCGGGCACGGAGAGCTTCACCAAGGTGGA
AGCTCTGAAGTACCAGCTGACCCTAATGATGAATTGACTGAAGCTGATAAGATGGGAGAA
GAAGGGAACCTGCAAGGCGACTATGATCACCTCACCCCAGCTGAGAGGCGTTACATGGAG
CAGAAGCAGAAGATTGACATGCATAAGCTAGCCAAAGTAGCCAACAAGTCACACAGGGAC
CGCATCCAGGACTTCAACCAATACCTGGCAAATCTTAGCGAGCACTACGACATCCCAAAA
GTTGGCCCTGGTTAA

Peptide Sequence

PEP ID

Os02t0727500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30276458:30279263:-1 gene:Os02g0727500 transcript:Os02t0727500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1754, eukaryotic domain containing protein. (Os02t0727500-01)
Sequence

RPQIGSRRTLASRGRGAASRPPSTASSSSPSPGWCGVEIHPGRPLSLGEMSEYQNVVGGR
LKLKGKALDVKEGGVKKKKKKKQHREESSEAGHGELHQGGSSEVPADPNDELTEADKMGE
EGNLQGDYDHLTPAERRYMEQKQKIDMHKLAKVANKSHRDRIQDFNQYLANLSEHYDIPK
VGPG

Transcript Sequence

Transcript ID

Os02t0727500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30276458:30279263:-1 gene:Os02g0727500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1754, eukaryotic domain containing protein. (Os02t0727500-01)
Sequence

GTCGTCCCCAAATCGGAAGCCGCCGAACCCTCGCTTCTCGGGGACGCGGAGCGGCCAGCC
GGCCACCTTCCACTGCCTCGAGCTCCTCTCCTTCTCCGGGTTGGTGTGGCGTGGAGATCC
ATCCTGGCCGACCTCTTTCGCTAGGCGAGATGTCTGAGTACCAGAACGTCGTTGGGGGTA
GGCTCAAGCTGAAGGGGAAGGCGCTGGATGTGAAGGAAGGGGGAGTCAAGAAGAAGAAAA
AGAAGAAGCAGCACCGCGAGGAGTCATCTGAAGCCGGGCACGGAGAGCTTCACCAAGGTG
GAAGCTCTGAAGTACCAGCTGACCCTAATGATGAATTGACTGAAGCTGATAAGATGGGAG
AAGAAGGGAACCTGCAAGGCGACTATGATCACCTCACCCCAGCTGAGAGGCGTTACATGG
AGCAGAAGCAGAAGATTGACATGCATAAGCTAGCCAAAGTAGCCAACAAGTCACACAGGG
ACCGCATCCAGGACTTCAACCAATACCTGGCAAATCTTAGCGAGCACTACGACATCCCAA
AAGTTGGCCCTGGTTAACTTTGCCTATTCAGAGCTTCGCAGGAATGCTTCCTATGCTGTA
CCCATCCAGCCATCTGTTAGCTTGTGATGCTCCTACCTGTATTGTTCTAAAACATTTGGT
TGTCTTCGAGTGTTGTATTTCGAAAACCCAAACCATGTTTAATTCAAGTGTTCGTATTCT
GAGTACTGTAGTTTTC