Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0726500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30226674:30230625:1 gene:Os02g0726500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant domain containing protein. (Os02t0726500-01)
Sequence

ATGGGGTGGAAGGCGACGATGGGTGGTGTCAAGGTGGCCGGCGGTGGCGGCGGCGTGGAG
AAGGTCAGGTGCCCGTCGGTGGCCGCGGTGGCGCGGTCGCGGATGAGGCCGTGGGTTCTG
CGCGCCACCACGACGGTGCTGCTTTGGACCTGCGTCATGCAGCTCACGGCCGTCGGGGAG
AGGTGGGGGCCGCGCGTCCTCAAGGGGTGGCCGTCGTGCCGGACGGCGCAGGAGGCGGCC
TCCGCCGCGCTCGCCGCCACGCGGCTCCCAATGCCGGTACCCGTCGTGGAGAAGGCCCCA
TTGCCGCCGAAAAGAATTTATAGGAACAACGGTTATCTGATGGTTTCATGCAATGGTGGA
CTCAACCAAATGCGAGCAGCTATATGTGATATGGTTGTCATTGCAAGATACTTGAATGTG
ACTCTAATAGTGCCCGAGTTGGATAAGACATCATTTTGGAATGATCCAAGTGAGTTCCAA
GATATATTTGATGTTGAACACTTTATAACATCTCTGAGAGATGAGGTTCGTATTCTTAGA
GAGTTGCCACCAAGGGTAAAGCGAAGAGTGGAACTTGGAATGTTCCACTCAATGCCACCT
ATTAGCTGGTCTGATATCTCTTATTACCGTAACAAGATACTTCCTTTAATTCGGAAGCAC
AAGGTTCTTCATCTGAACAGAACTGATGCTAGGCTAGCAAATAACGGACTACCGCTCGAT
GTCCAAAAGTTGCGTTGCCGAGTTAACTTCGGTTCACTGAAGTTCACTTCCGATATTGAA
GAGTTAGGCAGGAGAGTGATTAGATTGCTTCGCCAAAATGGCCCCTTTTTGGTCCTTCAT
TTACGATATGAAATGGATATGCTGGCTTTCTCTGGCTGTACTGAAGGCTGCACTCGTGAA
GAGGCAGATGAGCTCACAAGAATGAGATATGCTTATCCATGGTGGAAAGAGAAAGTAATA
AACTCCTATGCAAAAAGAAAAGATGGCCTTTGCCCTTTGACACCAGAGGAGATTGCTCTT
GTCCTCAGAGCCTTGGACATTGACAGAAGTATGCAGATATACATTGCAGCTGGAGAAATA
TATGGTGGAAAGCGTAGAATGGCTGCTCTTACTTCAGCGTATCCCAACGTGGTGAGAAAG
GAGACACTTTTGCAACCTTCCGATCTCATGTTCTTCCAGAACCATTCGTCACAAATGGCA
GCTCTGGATTACTTGGTATCACTGGAAAGTGATATATTTGTTCCAACATATGATGGTAAT
ATGGCTAAAGTTGTTGAGGGACACCGCAGGTTCATGGGTTTTAAGAAAACAATCTTATTG
GATCGAAAACTCATTGTTGAGCTGGTCGACCAGTATAATAGTGGTTCTATGCTGTGGGAT
GAATTCTCTTCACTAATCAAGTCTGTCCACGCAAACCGAATGGGAGCAGCTTCAAAAAGG
ACAGTGATTCATGACAAACCGAAGGAAGAGGACTACTTCTATGCTAACCCTCAAGAGTGC
TTGCGAGATCCCAATCTTTTACGGACATCATGA

Peptide Sequence

PEP ID

Os02t0726500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30226674:30230625:1 gene:Os02g0726500 transcript:Os02t0726500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant domain containing protein. (Os02t0726500-01)
Sequence

MGWKATMGGVKVAGGGGGVEKVRCPSVAAVARSRMRPWVLRATTTVLLWTCVMQLTAVGE
RWGPRVLKGWPSCRTAQEAASAALAATRLPMPVPVVEKAPLPPKRIYRNNGYLMVSCNGG
LNQMRAAICDMVVIARYLNVTLIVPELDKTSFWNDPSEFQDIFDVEHFITSLRDEVRILR
ELPPRVKRRVELGMFHSMPPISWSDISYYRNKILPLIRKHKVLHLNRTDARLANNGLPLD
VQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQNGPFLVLHLRYEMDMLAFSGCTEGCTRE
EADELTRMRYAYPWWKEKVINSYAKRKDGLCPLTPEEIALVLRALDIDRSMQIYIAAGEI
YGGKRRMAALTSAYPNVVRKETLLQPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGN
MAKVVEGHRRFMGFKKTILLDRKLIVELVDQYNSGSMLWDEFSSLIKSVHANRMGAASKR
TVIHDKPKEEDYFYANPQECLRDPNLLRTS

Transcript Sequence

Transcript ID

Os02t0726500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30226674:30230625:1 gene:Os02g0726500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant domain containing protein. (Os02t0726500-01)
Sequence

GGGGGGGGGGGGGATTCTTGCCATTTCTCGCCGATTCGGAGCCCGCATTGGATGCCGGAG
ATCGCGTCCTTATAGCTGGGTGGGGGGAGGCGAGCTTGGTTGGCCCGAGGTGGCGTCTCA
CGGAGGCAGGTGCTGTGTGCGCGAGGAGGAGAATTTCGCCGAGCTGTGTTGAGTGGTGGC
GAGGCGATTCCCCCCGCGCGGGAGTTCGTGGTGGAATTTTGACGTGCGCGAGGCGAGATG
CTTGTTGGGAGGCAATAATAGGGTACTGAATTCGCCGGTCCACGCTCGATGGGGTGGAAG
GCGACGATGGGTGGTGTCAAGGTGGCCGGCGGTGGCGGCGGCGTGGAGAAGGTCAGGTGC
CCGTCGGTGGCCGCGGTGGCGCGGTCGCGGATGAGGCCGTGGGTTCTGCGCGCCACCACG
ACGGTGCTGCTTTGGACCTGCGTCATGCAGCTCACGGCCGTCGGGGAGAGGTGGGGGCCG
CGCGTCCTCAAGGGGTGGCCGTCGTGCCGGACGGCGCAGGAGGCGGCCTCCGCCGCGCTC
GCCGCCACGCGGCTCCCAATGCCGGTACCCGTCGTGGAGAAGGCCCCATTGCCGCCGAAA
AGAATTTATAGGAACAACGGTTATCTGATGGTTTCATGCAATGGTGGACTCAACCAAATG
CGAGCAGCTATATGTGATATGGTTGTCATTGCAAGATACTTGAATGTGACTCTAATAGTG
CCCGAGTTGGATAAGACATCATTTTGGAATGATCCAAGTGAGTTCCAAGATATATTTGAT
GTTGAACACTTTATAACATCTCTGAGAGATGAGGTTCGTATTCTTAGAGAGTTGCCACCA
AGGGTAAAGCGAAGAGTGGAACTTGGAATGTTCCACTCAATGCCACCTATTAGCTGGTCT
GATATCTCTTATTACCGTAACAAGATACTTCCTTTAATTCGGAAGCACAAGGTTCTTCAT
CTGAACAGAACTGATGCTAGGCTAGCAAATAACGGACTACCGCTCGATGTCCAAAAGTTG
CGTTGCCGAGTTAACTTCGGTTCACTGAAGTTCACTTCCGATATTGAAGAGTTAGGCAGG
AGAGTGATTAGATTGCTTCGCCAAAATGGCCCCTTTTTGGTCCTTCATTTACGATATGAA
ATGGATATGCTGGCTTTCTCTGGCTGTACTGAAGGCTGCACTCGTGAAGAGGCAGATGAG
CTCACAAGAATGAGATATGCTTATCCATGGTGGAAAGAGAAAGTAATAAACTCCTATGCA
AAAAGAAAAGATGGCCTTTGCCCTTTGACACCAGAGGAGATTGCTCTTGTCCTCAGAGCC
TTGGACATTGACAGAAGTATGCAGATATACATTGCAGCTGGAGAAATATATGGTGGAAAG
CGTAGAATGGCTGCTCTTACTTCAGCGTATCCCAACGTGGTGAGAAAGGAGACACTTTTG
CAACCTTCCGATCTCATGTTCTTCCAGAACCATTCGTCACAAATGGCAGCTCTGGATTAC
TTGGTATCACTGGAAAGTGATATATTTGTTCCAACATATGATGGTAATATGGCTAAAGTT
GTTGAGGGACACCGCAGGTTCATGGGTTTTAAGAAAACAATCTTATTGGATCGAAAACTC
ATTGTTGAGCTGGTCGACCAGTATAATAGTGGTTCTATGCTGTGGGATGAATTCTCTTCA
CTAATCAAGTCTGTCCACGCAAACCGAATGGGAGCAGCTTCAAAAAGGACAGTGATTCAT
GACAAACCGAAGGAAGAGGACTACTTCTATGCTAACCCTCAAGAGTGCTTGCGAGATCCC
AATCTTTTACGGACATCATGATATTTTTAATAGCGCAATTGCGCGAGTATACTTATTACC
ATTACACGTTTACAGCATAGCTGAACTTGTTTCTTCCGAGCTGACTCAAATGGCTCGGCA
TTTTCAGTTCAGAACTTCAGGTTGGGCCATTGACAAGGGAGTTTGGATGGAAGCTGAAAG
AAAGGATGATACAATTGTGAGCTTGTGACTACTTAACTCAAATGTAGTTGGTACATAGAC
GTTACATGTTGGGGAATTGGGGATGTTAGGTTTCCTAATTACGCCGATTAAGAGAAGATA
TTCATGTATAGATGGGGGCGGGTTAGTGGATAAGTTAGTTCAACAGAACGTTACCGATCA
TGGTTCATGAAGGAAATTGTTATATATCAGGTTTTTCATACTTTGTGCAGACATTACTGC
TCTTGCATCTTGAATTTCTCTCCGTCTCCTGAAGTTTTACCATGTAGTACTACCAACTGT
TTCAGCAGTCTGAACAGATGCTGCTGGTTGTTGGGTGTATATATGCTCTGATTGTGTATT
ATAG