Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0724600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:30110288:30115478:1 gene:Os02g0724600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0724600-01)
Sequence

ATGGCGAAGAAGGGCGCGCCGCGCAGGCAGCCGCCGCCGCCGCCGCCTCGGCAACTGGCC
GCGGGGAAGAAGGGGAAGGCCTCCCCGAAGGCGGCGAAGAGGGCGGCGCCCAAGAAGCAG
AGGCTGCTCGAGTCGTCCTCCGACGACTCCGAGCTGGAGCAGCAGCAGGGGCAGCTTCAG
GAGGTGGAGTCCGGGTCAGACCTCGACGTCCCCTCTGATTCCGGCGCCGAGGAGCTCTCC
GACTCGGACGACGCCTCCTTTGAGGGAGGAGACAGCGGCGACGAGGAGGAGGAGGAAGAC
GATGAGGATGGCGACGACGACCCCCTCGCTGACGACTTCCTCGCCGGCAGTGACGACGAA
AGTGACGGAGGAGACGACTCTGGTGTGGACTCAGATGAGTCTGATGACTTAGAGGCGAAG
TCGCGAGCGATTGATGAAGAGAAAGAGAAGGCAGAAGAAGAGGCTGAGGAGGAGCTCAAG
CTCAATATTAGATCAGAATCTGATGAGTTCCGATTGCCCACAAAGGAGGAGTTGGAGGAA
GAGGCACTTCGACCACCAAACCTGCCGAATCTTAAAAGGAGGATATCAGAAATTGTCCGG
GTACTCTCAAACTTTAGTAAGCTGAGGCAAAAAGATGTGCCGCGAAAGGATTATGTCAAT
CAGCTGAAGACAGATATAATGTCATACTATGGATACAATGATTTTCTCGTTGAAGCATTT
ATTGAGATGTTCCCAGCTGTGGAGCTTGTTGAACTACTGGAATCTTTTGAGAAAAGACCG
CCTGAATGCTTACGAACAAATACATTGAAGACCCGGAGAAGGGATCTTGCTGCTGCTCTT
ATACCAAGAGGATTTAATCTGGATCCGATAGGGAAGTGGTCAAAGGTAGGCCTTGTTGTA
TACGACTCCACCATTTCAGCTGGTGCCACTGTTGAATATATGGCTGGGCATTACATGAAA
CAAGGTGCAAGTTCTTTCTTACCTGTGATGGCTCTTGCTCCTCAGGAGAAAGAGCGAATT
GTTGATATGGCGGCTGCCCCAGGTGGCAAGACTACATATATTGGAGCTCTTATGAAGAAT
ACTGGAATAATTTATGCAAATGAGTTCAATGAGAAAAGGCTGCATGGACTTTTGGGCAAC
ATACATCGCATGGGTGTTACCAATACCATAGTTTGTAATTATGATGGTAAAGAGCTACCT
AAAGTTCTTGGGATGAATTCGGTTGACAGAGTTCTTTTGGATGCACCCTGCACAGGCACA
GGGACCATTTGGAAGGATCCACAAATTAAAACGTCGAAGGGCATTGAGGACATCAGAGAC
TGTGCTTTTGTACAAAAGCAATTGCTATTAGCTGCTATTGATTTGGTTGATGCCAACTCC
AAAACTGGAGGTTACATTGTTTACTCAACATGTTCATTGATGATTCCAGAGAATGAAGCG
GTTGTTGACTATGCCCTTAAAAAGAGAAACGTAAAGCTTGTACCTTGTGGATTAGATTTT
GGGCGTCCAGGATTCATCCGGTTCCGAGAGCATCGATTCCATACTTCTTTAGATAAAACA
AGGAGATTTTATCCCCATGTAAACAACATGGATGGTTTTTTTGTTGCGAAGCTTAAAAAA
TTGAGCAATACGATCCCAGTGGCATCTGAGTCATCTAATGTGCCTGAAGAAGCAATTGAG
AAGGCTGATCCTAGCAGTGACGATCCTCAAAAACAGCCCATTCAGTCAAAAAAACATAAA
GATGTGAAGACGACGAATGAAGAGACAAGCATCCTTGATGGGGTGACTAAGGACAAAAGG
CAGACACATGAGACACTCAAGAACCACAAGAAGGGTAAGAAACGCAATGGCCCTGAGAGT
ACTAAAATAAAGGGAGACCAGAAAGAAACACACAACGAAGAAGAGCCTACAAGTGAAAAA
AAGCAGCCTGTGTCTGCTAAAATAAAAAAATCTGTTCCCAAGAGAATATCAGGTAACAAA
GGAAAGAAGCTGGATACGGGCAAAGGAGAGAAGAGGAAAAGAAACTGGATGGTGAGGCGA
GACTGGGAAGCTTATAAGAAGTCGAGGAGTAAACAAGTATGA

Peptide Sequence

PEP ID

Os02t0724600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:30110288:30115478:1 gene:Os02g0724600 transcript:Os02t0724600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0724600-01)
Sequence

MAKKGAPRRQPPPPPPRQLAAGKKGKASPKAAKRAAPKKQRLLESSSDDSELEQQQGQLQ
EVESGSDLDVPSDSGAEELSDSDDASFEGGDSGDEEEEEDDEDGDDDPLADDFLAGSDDE
SDGGDDSGVDSDESDDLEAKSRAIDEEKEKAEEEAEEELKLNIRSESDEFRLPTKEELEE
EALRPPNLPNLKRRISEIVRVLSNFSKLRQKDVPRKDYVNQLKTDIMSYYGYNDFLVEAF
IEMFPAVELVELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVV
YDSTISAGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMKN
TGIIYANEFNEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMNSVDRVLLDAPCTGT
GTIWKDPQIKTSKGIEDIRDCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSLMIPENEA
VVDYALKKRNVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKK
LSNTIPVASESSNVPEEAIEKADPSSDDPQKQPIQSKKHKDVKTTNEETSILDGVTKDKR
QTHETLKNHKKGKKRNGPESTKIKGDQKETHNEEEPTSEKKQPVSAKIKKSVPKRISGNK
GKKLDTGKGEKRKRNWMVRRDWEAYKKSRSKQV

Transcript Sequence

Transcript ID

Os02t0724600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30110288:30115478:1 gene:Os02g0724600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0724600-01)
Sequence

TCTCTCTCTCTCCCATGGCGAAGAAGGGCGCGCCGCGCAGGCAGCCGCCGCCGCCGCCGC
CTCGGCAACTGGCCGCGGGGAAGAAGGGGAAGGCCTCCCCGAAGGCGGCGAAGAGGGCGG
CGCCCAAGAAGCAGAGGCTGCTCGAGTCGTCCTCCGACGACTCCGAGCTGGAGCAGCAGC
AGGGGCAGCTTCAGGAGGTGGAGTCCGGGTCAGACCTCGACGTCCCCTCTGATTCCGGCG
CCGAGGAGCTCTCCGACTCGGACGACGCCTCCTTTGAGGGAGGAGACAGCGGCGACGAGG
AGGAGGAGGAAGACGATGAGGATGGCGACGACGACCCCCTCGCTGACGACTTCCTCGCCG
GCAGTGACGACGAAAGTGACGGAGGAGACGACTCTGGTGTGGACTCAGATGAGTCTGATG
ACTTAGAGGCGAAGTCGCGAGCGATTGATGAAGAGAAAGAGAAGGCAGAAGAAGAGGCTG
AGGAGGAGCTCAAGCTCAATATTAGATCAGAATCTGATGAGTTCCGATTGCCCACAAAGG
AGGAGTTGGAGGAAGAGGCACTTCGACCACCAAACCTGCCGAATCTTAAAAGGAGGATAT
CAGAAATTGTCCGGGTACTCTCAAACTTTAGTAAGCTGAGGCAAAAAGATGTGCCGCGAA
AGGATTATGTCAATCAGCTGAAGACAGATATAATGTCATACTATGGATACAATGATTTTC
TCGTTGAAGCATTTATTGAGATGTTCCCAGCTGTGGAGCTTGTTGAACTACTGGAATCTT
TTGAGAAAAGACCGCCTGAATGCTTACGAACAAATACATTGAAGACCCGGAGAAGGGATC
TTGCTGCTGCTCTTATACCAAGAGGATTTAATCTGGATCCGATAGGGAAGTGGTCAAAGG
TAGGCCTTGTTGTATACGACTCCACCATTTCAGCTGGTGCCACTGTTGAATATATGGCTG
GGCATTACATGAAACAAGGTGCAAGTTCTTTCTTACCTGTGATGGCTCTTGCTCCTCAGG
AGAAAGAGCGAATTGTTGATATGGCGGCTGCCCCAGGTGGCAAGACTACATATATTGGAG
CTCTTATGAAGAATACTGGAATAATTTATGCAAATGAGTTCAATGAGAAAAGGCTGCATG
GACTTTTGGGCAACATACATCGCATGGGTGTTACCAATACCATAGTTTGTAATTATGATG
GTAAAGAGCTACCTAAAGTTCTTGGGATGAATTCGGTTGACAGAGTTCTTTTGGATGCAC
CCTGCACAGGCACAGGGACCATTTGGAAGGATCCACAAATTAAAACGTCGAAGGGCATTG
AGGACATCAGAGACTGTGCTTTTGTACAAAAGCAATTGCTATTAGCTGCTATTGATTTGG
TTGATGCCAACTCCAAAACTGGAGGTTACATTGTTTACTCAACATGTTCATTGATGATTC
CAGAGAATGAAGCGGTTGTTGACTATGCCCTTAAAAAGAGAAACGTAAAGCTTGTACCTT
GTGGATTAGATTTTGGGCGTCCAGGATTCATCCGGTTCCGAGAGCATCGATTCCATACTT
CTTTAGATAAAACAAGGAGATTTTATCCCCATGTAAACAACATGGATGGTTTTTTTGTTG
CGAAGCTTAAAAAATTGAGCAATACGATCCCAGTGGCATCTGAGTCATCTAATGTGCCTG
AAGAAGCAATTGAGAAGGCTGATCCTAGCAGTGACGATCCTCAAAAACAGCCCATTCAGT
CAAAAAAACATAAAGATGTGAAGACGACGAATGAAGAGACAAGCATCCTTGATGGGGTGA
CTAAGGACAAAAGGCAGACACATGAGACACTCAAGAACCACAAGAAGGGTAAGAAACGCA
ATGGCCCTGAGAGTACTAAAATAAAGGGAGACCAGAAAGAAACACACAACGAAGAAGAGC
CTACAAGTGAAAAAAAGCAGCCTGTGTCTGCTAAAATAAAAAAATCTGTTCCCAAGAGAA
TATCAGGTAACAAAGGAAAGAAGCTGGATACGGGCAAAGGAGAGAAGAGGAAAAGAAACT
GGATGGTGAGGCGAGACTGGGAAGCTTATAAGAAGTCGAGGAGTAAACAAGTATGAAAGG
CACGGATGAAGGAGCTCTAGCCGTAGACAAATTGCAGTTAAATTTGAAAACCCACATACG
GGGAAGATGTTAGAAGGAGCGAGAATACACAATTTTGGCGTTGGTTCAAGTTCGAGGCGA
AGGAAAATTTTTGTTGTACTTAAGTCTAGTGAAGTGATCGTCTGTAGTTTTACCCTTTCT
TTTCCGTCTTGGTTTAATGTACCAATACTAAGGCACTTCTCGGACATGAGTTATGGGAGT
ATGTGATTGACT