Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0723600-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:30067771:30071645:-1 gene:Os02g0723600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein, expressed. (Os02t0723600-00)
Sequence

ATGGGGAGCAAATCGAGCAAGGACACGGACGACGATCACGAGCCCAAGCAGCAGGAAAAG
AAGCTTCCGGAACACCTTGAGGTCCAGCGCACGCGTGTTGTCTGCAAGGCCGACGCCCCC
GTTAATACTGAAGGTTTTCAATACGCTGGTGCTTATTCTGCTATGGGAATTGATAATAGC
GTGTCAGCGGAGAAATTTTGCAAAAACTTCAAAGTTGAGATAAGTCGACTTACGGAAGAT
GATATGGAGTTTGATATGATTGGTATTGATGCATCAATAGCTAATGCTTTTCGGAGAATC
CTTATAGCAGAGCTTCCTACAATGGCAATCGAGAAAGTATTAATGGTTGACAACACCTCA
GTTATAGCAGATGAAGTTCTATCACATAGGCTTGGCCTTATTCCACTTGATGCAGATCCT
AGGCATTTTGAATATATGTCAGAAAATGATGTCCCAAATGAAAGAAACACTATTGTGTAC
AAACTCCATGTTTCATGTAAAAAGGGTTCCCCGCGGCTTACAGTGAAGTCTGGTGATTTA
GAGTGGTTGCCAGAAGGCAGCCGACTACCTTTGGCATCTCCTGCTCAATCTAGGTACAAA
CAAAAGACCTACACTTCCTTCAGTCAAAGCCAGAAGGATATCTTAGAAAAGCCTCTTGGT
GTGAAATTTAAAGATATAACTATTGCAAGGCTTGGGCCAGGCCAGGTTGTTTTCCGTAAA
GAAATCAAAGGTGATAACGCAGAGAAGCTAGTGAAAAAGTGCCCGGTCAATGTTTTTGAT
ATTGAAGACCTGGGAAACGTTACAATCGAGTCTACTGGAGGGCTACCGCCAGAGGCACTC
TTCACAGAAGCCGTGAGGATCCTTGAGGAGAAGTGTGAGAGAGTGATATCTGGACTGTCA
TAA

Peptide Sequence

PEP ID

Os02t0723600-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:30067771:30071645:-1 gene:Os02g0723600 transcript:Os02t0723600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein, expressed. (Os02t0723600-00)
Sequence

MGSKSSKDTDDDHEPKQQEKKLPEHLEVQRTRVVCKADAPVNTEGFQYAGAYSAMGIDNS
VSAEKFCKNFKVEISRLTEDDMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTS
VIADEVLSHRLGLIPLDADPRHFEYMSENDVPNERNTIVYKLHVSCKKGSPRLTVKSGDL
EWLPEGSRLPLASPAQSRYKQKTYTSFSQSQKDILEKPLGVKFKDITIARLGPGQVVFRK
EIKGDNAEKLVKKCPVNVFDIEDLGNVTIESTGGLPPEALFTEAVRILEEKCERVISGLS

Transcript Sequence

Transcript ID

Os02t0723600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:30067771:30071645:-1 gene:Os02g0723600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein, expressed. (Os02t0723600-00)
Sequence

ATGGGGAGCAAATCGAGCAAGGACACGGACGACGATCACGAGCCCAAGCAGCAGGAAAAG
AAGCTTCCGGAACACCTTGAGGTCCAGCGCACGCGTGTTGTCTGCAAGGCCGACGCCCCC
GTTAATACTGAAGGTTTTCAATACGCTGGTGCTTATTCTGCTATGGGAATTGATAATAGC
GTGTCAGCGGAGAAATTTTGCAAAAACTTCAAAGTTGAGATAAGTCGACTTACGGAAGAT
GATATGGAGTTTGATATGATTGGTATTGATGCATCAATAGCTAATGCTTTTCGGAGAATC
CTTATAGCAGAGCTTCCTACAATGGCAATCGAGAAAGTATTAATGGTTGACAACACCTCA
GTTATAGCAGATGAAGTTCTATCACATAGGCTTGGCCTTATTCCACTTGATGCAGATCCT
AGGCATTTTGAATATATGTCAGAAAATGATGTCCCAAATGAAAGAAACACTATTGTGTAC
AAACTCCATGTTTCATGTAAAAAGGGTTCCCCGCGGCTTACAGTGAAGTCTGGTGATTTA
GAGTGGTTGCCAGAAGGCAGCCGACTACCTTTGGCATCTCCTGCTCAATCTAGGTACAAA
CAAAAGACCTACACTTCCTTCAGTCAAAGCCAGAAGGATATCTTAGAAAAGCCTCTTGGT
GTGAAATTTAAAGATATAACTATTGCAAGGCTTGGGCCAGGCCAGGTTGTTTTCCGTAAA
GAAATCAAAGGTGATAACGCAGAGAAGCTAGTGAAAAAGTGCCCGGTCAATGTTTTTGAT
ATTGAAGACCTGGGAAACGTTACAATCGAGTCTACTGGAGGGCTACCGCCAGAGGCACTC
TTCACAGAAGCCGTGAGGATCCTTGAGGAGAAGTGTGAGAGAGTGATATCTGGACTGTCA
TAA