Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0722800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:30015998:30025935:-1 gene:Os02g0722800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-53 description:WD40 repeat-like domain containing protein. (Os02t0722800-01);Similar to Peptidase S26A, signal peptidase I; WD40-like. (Os02t0722800-02)
Sequence	ATGGCGACCCCGACCGGAAACCCTAATCCTAACCCCAACCCTAGCACTCCCTTCGAGGTC AGCATGCTGTTCAAGCCGCCCTCCAACGCCCCCGCGGCCGCCCCCATCTTCCCCGGCGGC CCCGCCGCGGGCCCGCCGCCGCCGTCCGCCGCGTACTCCTACCCGCCTGCGACTCCCCCC TTCCACCGCGCCCCGTTCCTCCACTATCCGCAGGACCCCATGGCGGCGCCGCACATGCCC CGCCCCGTCATCTCCTTCCCGATGCCGACCCCGAACCCGGCCGCTATCCCCAGCGCCGCC GCCGCCGCCGCCGCAGCCGCGGGGCCCAGCCAGAACCACGGCGCGCGCCTCATGCAGCTC CTGGGGAGCTCCGGGCCGGCCCACCTCGATTCCTCCGCCTCCATGCCCCCGCCGGCGTCG GAGTTCGCCGCCGCGCAGCCGCCGCAGCCGATCCCCGCGATGCCGTCGGCGCCGCCGGCG AGGATGCTGAGCAGCACGAGCAGCAAGATGCCGCGGGGGCGCCTTCTCGGCGGCGGGGAC AGAGCGGTGCACGACGTTGACTCGAGGCTGCCGGGGGAGGCGCAGCCGCCGCAGCTGGAG GTGACGCCGATCACCAAGTACACATCGGATCCCGGGCTCGTGTTGGGCAGGCAGATCGCC GTGAACAGGACGTACATCGTGTATGGGCTTAAGCTCGGGAACATCCGCGTGCTAAACATC AACACCGCGCTCCGTTCGCTCCTTCGTGGCCACACACAGAGGGTGACAGATATGGCTTTC TTTGCTGAGGATGTTCATCGTTTAGCAAGTGCAAGTGTAGATGGTCGGATATATGTTTGG AAGATTGATGAGGGTCCTGATGAGGACAGCAAACCACAAATTACAGGAAAGATTGAAATT GCCATCCAGATTGTTGGCGATGCTGAATCTTACCATCCAAGGATCTGTTGGCACTCTCAT AAGCAGGAGATTCTGTTTGTTGGCATTGGAAACTGTGTCTTAAGAATAGACACAACTAAA GTGCGACGGGGAAGGGACGTAAGTGCAGAGGAACCTATCAAGTGTCATCTTGACAAGCTC ATTGATGGTGTGCGCTTAGTTGGTAAGCATGATGATGACGTTACAGATTTGTCCTTATCT CAATGGATGACTACCCGACTGGCTTCAGGATCAAAAGATGGCACGGTAAAAATTTGGGAT GATCGCAAGCCAGTGCCTCTATCGATTCTGAAGCCACATGATGGTCAAGCTGTTTATTCT GTTGCTTTTCTCACGGCACCTGAGCATCCAGACCATATAAACCTCGTTACAGCAGGTCCT CTAAACCGAGAAGTTAAAATTTGGGCTTCTGCCAATGAAGGAGGTGTGTTGTTGCCAAGT GATTCCGAGACTTGGAATTGCACACAGACATTGGAACTTGTCAGCTCACTGGAACCCAGG GTAGAGGAGGCATTTTTCAACCAAGTTACCGTGCTGCCTCAAGCAAGTATTATTTTACTT GCAAATGCTAAGAAAAATGCTATTTATGCTGTGCATGTTGAGTATGGCACAGATCCTGCT TCAACTCGCTTGGATTATATAGCAGATTTTACAGTTGCAATGCCTATTTTAAGTCTCACT GGCACACATGAAAGCCAACCTGGCAATGACCAAGTTGTACAAGTTTATTGTGTTCAAACA ATGGCTATCCAGCAGTATGGGCTGGATTTATCACTCTGTTCACCTCCTACAAGTGAAACT ACTGGACTTGGAAGGGATCCATCTATTTCTCGTGTTCACGAGACACCTCTGGAAGTGGTA GGAGCAGAGTCATCCATGCCAACTAGCTTCACCGATTCTTATTCCGTCGGTTCTCCAAGT AAATCATCAACCGTTGATCAACAGTCTGAACTTGATCCTAAACCATCAGCTCCACCACTT ACATACACAGAAGGTGATGGTTCTGTTCATCTTCCATCAGCCTCTCTTGCATCAAACATG GACCCTTCTGGATCAGGATCGTCACTAGGTAACCTTGAAATGGACCAACCAGCTTTTGAT TATGCGATGAACAGAAATGTGGAGCCTAAAATTTTGACTAGGCAAGATACACCCATGCCT AAGGACAACTTTGGAAAGGATGATCCAAGAGATGGTCGCAATGATGTTACAATGCTTCCA AATCCTCATTTGATGTTTAAGGTAGGAGGGAACACTACACACTTGGTAACTCCATCTGAA ATCATATCTGGCGCTCTATCTTCAGCTGAGAGCAACCATGTCCCTAAGTCTGATGGAGTG AAAATCCAGGACGGCACAAGTAGTGGTCATCAGATGGCAGAAGTAGAACCAAAACATACC AATGAGCACACATTTGATCAAAATTTGGACCTTGAAGTAGCACAGGTTGTTTGTGAGAAT ACAAAGCAAGCTGGTTCATCGGAGCAAACTGTTAAAATGATTAGTGAGCGCTCGGTAACA ACTGATAAGTACAGTGTGGAAGAATCACAGACATCATGTGATCGATCCATTTCTGAGCAT ACTGGTGCTGCTGACGAAAGTGTTACAAAAAAACCTGTTGAAGTGCCTGAGAAAAGTGAT TATTCCTCTGCTTCTGTGGAGCAATCATCTTCATATACCAAGAAGGAGAAAATTATGCAT CCTCAAGCATCTGGGCAGTCATCTCCTTCTACAAGCGCATTCAACTCAACTGAGTCTTCA CATGAACCTCCGAGTAGTGCATACCCTCCTATCAATTCATTTCCAGAAGTTACTACGCAA GGGATGCTTCAACAGCTCATAGCAATGCATAAGGACTTGCAAAAGCAGCTGGGTACTATT GTTGTTGCACCTCTTGCAAAGGAAGGCAAAAGAATTGAGGCATCATTAGGGCGCACCATG GAGAAATCTATCAAGGCTAACCTTGATGCCTTGTGGGTTCGTATCCAGGAGGAGAATGCA AAACGAGAAAAGGCTGAAAGAGAGCGAATGCAGCAAATGATTACTCTTATCACTAATTCA ATAAGCAAGGACCTTCCTGCTACTTTGGAGAAGTCACTGAAGAAAGAAATTTCTTCACTT GGACCTGTTATTGCACGGGCAATAACACCTATTATCGAGAAGTGTTCAGCCTCTGCAGTT GCTGATTCAATTCAGAAAGTGGTTGGTGACAGAGTGGTGAATCAGCTGGACAAGTCTGTT AGTGCAAAACTTGAAGCTACTGTTGCTAGACAAATCCAAATGCAGTTCCACACATCTGTA AAACAGACCCTTCAGGATGCTTTACGTGCTAGCCTGGAAGCTTTCCTTGTTCCAGCGTTT GAACAATCTTGCAAGACAATGTTTGAGCAAGTCGATAGCGCATTCCAGAAAGGAATGTCT GAACACACTGTTGCTATTCAGCAGCAAGTTGAGGCAACACATACCCCATTGGCGCAAACT TTAAAGGATACCATCTCTTCTGCGTCTTCGATCACCCAGAATCTTACAGCAGAGTTGCTT GATGGCCATCGCAAACTATTGGCGCTGCTTGCATCGGGCAATGCAAAAGCACATAGTACA AACGTTTTGCAGCCCAACAATGTCCCTGTGACTGGTCCACCGGAGGTTGAGGCTCCATTA GATCCAATGAAGGAGTTGGGCAGACTGATATCTGAACGCAAATTTGACGAGGCATTTACA ATGGCTCTTCAAAGAAGTGACGTGTCGATAGTGTCTTGGTTGTGCTCTCAGGTTGATTTG CGCGCATTGTGCTCAATGGTCCCCGTCCCCCTTAACCAGGGGGTCCTCCTAGCCCTATTG CAGCAGCTAGCAGTTGACATTGCTACTGATACGCCGCGGAAGATTCAGTGGATGACAGAT GTCGCTATGGCGATAAATCCAACCGATCCGGTGATCGCCATGCACGTGAAGCCTATTTTC GAGCAAGTCTACAATGCATTGCTCCACCTACGCTCGCTCCCCACCACCAGCCCATCAGAC AGCACCAGCATCCGCTTATTCATGCATGTAATTAATTCTGTTCTGCTTAGCTACAAGTGA

Peptide Sequence

PEP ID	Os02t0722800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:30015998:30025935:-1 gene:Os02g0722800 transcript:Os02t0722800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-53 description:WD40 repeat-like domain containing protein. (Os02t0722800-01);Similar to Peptidase S26A, signal peptidase I; WD40-like. (Os02t0722800-02)
Sequence	MATPTGNPNPNPNPSTPFEVSMLFKPPSNAPAAAPIFPGGPAAGPPPPSAAYSYPPATPP FHRAPFLHYPQDPMAAPHMPRPVISFPMPTPNPAAIPSAAAAAAAAAGPSQNHGARLMQL LGSSGPAHLDSSASMPPPASEFAAAQPPQPIPAMPSAPPARMLSSTSSKMPRGRLLGGGD RAVHDVDSRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNI NTALRSLLRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEDSKPQITGKIEI AIQIVGDAESYHPRICWHSHKQEILFVGIGNCVLRIDTTKVRRGRDVSAEEPIKCHLDKL IDGVRLVGKHDDDVTDLSLSQWMTTRLASGSKDGTVKIWDDRKPVPLSILKPHDGQAVYS VAFLTAPEHPDHINLVTAGPLNREVKIWASANEGGVLLPSDSETWNCTQTLELVSSLEPR VEEAFFNQVTVLPQASIILLANAKKNAIYAVHVEYGTDPASTRLDYIADFTVAMPILSLT GTHESQPGNDQVVQVYCVQTMAIQQYGLDLSLCSPPTSETTGLGRDPSISRVHETPLEVV GAESSMPTSFTDSYSVGSPSKSSTVDQQSELDPKPSAPPLTYTEGDGSVHLPSASLASNM DPSGSGSSLGNLEMDQPAFDYAMNRNVEPKILTRQDTPMPKDNFGKDDPRDGRNDVTMLP NPHLMFKVGGNTTHLVTPSEIISGALSSAESNHVPKSDGVKIQDGTSSGHQMAEVEPKHT NEHTFDQNLDLEVAQVVCENTKQAGSSEQTVKMISERSVTTDKYSVEESQTSCDRSISEH TGAADESVTKKPVEVPEKSDYSSASVEQSSSYTKKEKIMHPQASGQSSPSTSAFNSTESS HEPPSSAYPPINSFPEVTTQGMLQQLIAMHKDLQKQLGTIVVAPLAKEGKRIEASLGRTM EKSIKANLDALWVRIQEENAKREKAERERMQQMITLITNSISKDLPATLEKSLKKEISSL GPVIARAITPIIEKCSASAVADSIQKVVGDRVVNQLDKSVSAKLEATVARQIQMQFHTSV KQTLQDALRASLEAFLVPAFEQSCKTMFEQVDSAFQKGMSEHTVAIQQQVEATHTPLAQT LKDTISSASSITQNLTAELLDGHRKLLALLASGNAKAHSTNVLQPNNVPVTGPPEVEAPL DPMKELGRLISERKFDEAFTMALQRSDVSIVSWLCSQVDLRALCSMVPVPLNQGVLLALL QQLAVDIATDTPRKIQWMTDVAMAINPTDPVIAMHVKPIFEQVYNALLHLRSLPTTSPSD STSIRLFMHVINSVLLSYK

Transcript Sequence

Transcript ID	Os02t0722800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:30015998:30025935:-1 gene:Os02g0722800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-53 description:WD40 repeat-like domain containing protein. (Os02t0722800-01);Similar to Peptidase S26A, signal peptidase I; WD40-like. (Os02t0722800-02)
Sequence	GACTTTCCACTTCGTCTCGCCTCCAACTCCGCCCCTCTCCTCCTCCATCAGATCTGCCAC TCCACTCTCCTCCTCCCCCTCCCTCCCGAGCCGCGCCTCCCATGGCGACCCCGACCGGAA ACCCTAATCCTAACCCCAACCCTAGCACTCCCTTCGAGGTCAGCATGCTGTTCAAGCCGC CCTCCAACGCCCCCGCGGCCGCCCCCATCTTCCCCGGCGGCCCCGCCGCGGGCCCGCCGC CGCCGTCCGCCGCGTACTCCTACCCGCCTGCGACTCCCCCCTTCCACCGCGCCCCGTTCC TCCACTATCCGCAGGACCCCATGGCGGCGCCGCACATGCCCCGCCCCGTCATCTCCTTCC CGATGCCGACCCCGAACCCGGCCGCTATCCCCAGCGCCGCCGCCGCCGCCGCCGCAGCCG CGGGGCCCAGCCAGAACCACGGCGCGCGCCTCATGCAGCTCCTGGGGAGCTCCGGGCCGG CCCACCTCGATTCCTCCGCCTCCATGCCCCCGCCGGCGTCGGAGTTCGCCGCCGCGCAGC CGCCGCAGCCGATCCCCGCGATGCCGTCGGCGCCGCCGGCGAGGATGCTGAGCAGCACGA GCAGCAAGATGCCGCGGGGGCGCCTTCTCGGCGGCGGGGACAGAGCGGTGCACGACGTTG ACTCGAGGCTGCCGGGGGAGGCGCAGCCGCCGCAGCTGGAGGTGACGCCGATCACCAAGT ACACATCGGATCCCGGGCTCGTGTTGGGCAGGCAGATCGCCGTGAACAGGACGTACATCG TGTATGGGCTTAAGCTCGGGAACATCCGCGTGCTAAACATCAACACCGCGCTCCGTTCGC TCCTTCGTGGCCACACACAGAGGGTGACAGATATGGCTTTCTTTGCTGAGGATGTTCATC GTTTAGCAAGTGCAAGTGTAGATGGTCGGATATATGTTTGGAAGATTGATGAGGGTCCTG ATGAGGACAGCAAACCACAAATTACAGGAAAGATTGAAATTGCCATCCAGATTGTTGGCG ATGCTGAATCTTACCATCCAAGGATCTGTTGGCACTCTCATAAGCAGGAGATTCTGTTTG TTGGCATTGGAAACTGTGTCTTAAGAATAGACACAACTAAAGTGCGACGGGGAAGGGACG TAAGTGCAGAGGAACCTATCAAGTGTCATCTTGACAAGCTCATTGATGGTGTGCGCTTAG TTGGTAAGCATGATGATGACGTTACAGATTTGTCCTTATCTCAATGGATGACTACCCGAC TGGCTTCAGGATCAAAAGATGGCACGGTAAAAATTTGGGATGATCGCAAGCCAGTGCCTC TATCGATTCTGAAGCCACATGATGGTCAAGCTGTTTATTCTGTTGCTTTTCTCACGGCAC CTGAGCATCCAGACCATATAAACCTCGTTACAGCAGGTCCTCTAAACCGAGAAGTTAAAA TTTGGGCTTCTGCCAATGAAGGAGGTGTGTTGTTGCCAAGTGATTCCGAGACTTGGAATT GCACACAGACATTGGAACTTGTCAGCTCACTGGAACCCAGGGTAGAGGAGGCATTTTTCA ACCAAGTTACCGTGCTGCCTCAAGCAAGTATTATTTTACTTGCAAATGCTAAGAAAAATG CTATTTATGCTGTGCATGTTGAGTATGGCACAGATCCTGCTTCAACTCGCTTGGATTATA TAGCAGATTTTACAGTTGCAATGCCTATTTTAAGTCTCACTGGCACACATGAAAGCCAAC CTGGCAATGACCAAGTTGTACAAGTTTATTGTGTTCAAACAATGGCTATCCAGCAGTATG GGCTGGATTTATCACTCTGTTCACCTCCTACAAGTGAAACTACTGGACTTGGAAGGGATC CATCTATTTCTCGTGTTCACGAGACACCTCTGGAAGTGGTAGGAGCAGAGTCATCCATGC CAACTAGCTTCACCGATTCTTATTCCGTCGGTTCTCCAAGTAAATCATCAACCGTTGATC AACAGTCTGAACTTGATCCTAAACCATCAGCTCCACCACTTACATACACAGAAGGTGATG GTTCTGTTCATCTTCCATCAGCCTCTCTTGCATCAAACATGGACCCTTCTGGATCAGGAT CGTCACTAGGTAACCTTGAAATGGACCAACCAGCTTTTGATTATGCGATGAACAGAAATG TGGAGCCTAAAATTTTGACTAGGCAAGATACACCCATGCCTAAGGACAACTTTGGAAAGG ATGATCCAAGAGATGGTCGCAATGATGTTACAATGCTTCCAAATCCTCATTTGATGTTTA AGGTAGGAGGGAACACTACACACTTGGTAACTCCATCTGAAATCATATCTGGCGCTCTAT CTTCAGCTGAGAGCAACCATGTCCCTAAGTCTGATGGAGTGAAAATCCAGGACGGCACAA GTAGTGGTCATCAGATGGCAGAAGTAGAACCAAAACATACCAATGAGCACACATTTGATC AAAATTTGGACCTTGAAGTAGCACAGGTTGTTTGTGAGAATACAAAGCAAGCTGGTTCAT CGGAGCAAACTGTTAAAATGATTAGTGAGCGCTCGGTAACAACTGATAAGTACAGTGTGG AAGAATCACAGACATCATGTGATCGATCCATTTCTGAGCATACTGGTGCTGCTGACGAAA GTGTTACAAAAAAACCTGTTGAAGTGCCTGAGAAAAGTGATTATTCCTCTGCTTCTGTGG AGCAATCATCTTCATATACCAAGAAGGAGAAAATTATGCATCCTCAAGCATCTGGGCAGT CATCTCCTTCTACAAGCGCATTCAACTCAACTGAGTCTTCACATGAACCTCCGAGTAGTG CATACCCTCCTATCAATTCATTTCCAGAAGTTACTACGCAAGGGATGCTTCAACAGCTCA TAGCAATGCATAAGGACTTGCAAAAGCAGCTGGGTACTATTGTTGTTGCACCTCTTGCAA AGGAAGGCAAAAGAATTGAGGCATCATTAGGGCGCACCATGGAGAAATCTATCAAGGCTA ACCTTGATGCCTTGTGGGTTCGTATCCAGGAGGAGAATGCAAAACGAGAAAAGGCTGAAA GAGAGCGAATGCAGCAAATGATTACTCTTATCACTAATTCAATAAGCAAGGACCTTCCTG CTACTTTGGAGAAGTCACTGAAGAAAGAAATTTCTTCACTTGGACCTGTTATTGCACGGG CAATAACACCTATTATCGAGAAGTGTTCAGCCTCTGCAGTTGCTGATTCAATTCAGAAAG TGGTTGGTGACAGAGTGGTGAATCAGCTGGACAAGTCTGTTAGTGCAAAACTTGAAGCTA CTGTTGCTAGACAAATCCAAATGCAGTTCCACACATCTGTAAAACAGACCCTTCAGGATG CTTTACGTGCTAGCCTGGAAGCTTTCCTTGTTCCAGCGTTTGAACAATCTTGCAAGACAA TGTTTGAGCAAGTCGATAGCGCATTCCAGAAAGGAATGTCTGAACACACTGTTGCTATTC AGCAGCAAGTTGAGGCAACACATACCCCATTGGCGCAAACTTTAAAGGATACCATCTCTT CTGCGTCTTCGATCACCCAGAATCTTACAGCAGAGTTGCTTGATGGCCATCGCAAACTAT TGGCGCTGCTTGCATCGGGCAATGCAAAAGCACATAGTACAAACGTTTTGCAGCCCAACA ATGTCCCTGTGACTGGTCCACCGGAGGTTGAGGCTCCATTAGATCCAATGAAGGAGTTGG GCAGACTGATATCTGAACGCAAATTTGACGAGGCATTTACAATGGCTCTTCAAAGAAGTG ACGTGTCGATAGTGTCTTGGTTGTGCTCTCAGGTTGATTTGCGCGCATTGTGCTCAATGG TCCCCGTCCCCCTTAACCAGGGGGTCCTCCTAGCCCTATTGCAGCAGCTAGCAGTTGACA TTGCTACTGATACGCCGCGGAAGATTCAGTGGATGACAGATGTCGCTATGGCGATAAATC CAACCGATCCGGTGATCGCCATGCACGTGAAGCCTATTTTCGAGCAAGTCTACAATGCAT TGCTCCACCTACGCTCGCTCCCCACCACCAGCCCATCAGACAGCACCAGCATCCGCTTAT TCATGCATGTAATTAATTCTGTTCTGCTTAGCTACAAGTGATTCTAGGCATCTATTGAGG TTCTGGAACTGAGATGCATGGTCTACTACCGTTGTATAGAGAAATTTTGGTAAGCGAAGG AAACCCAATAGGGCATTCCATTGCCTATGAGGCTGTGACCGAGAACACTAGCAGGAGGGT GGAAGTGCCCCTTGCTGTAAACTAGGCTTGTAACAGTCTTAATTTGGAGTATTTCAATAT CCAGTTTAGTGTCTACTAGTTCGCCCTCTTGAGCCAGTAATGCTCAATCAGGCACACAAC TGTAGCCCCTGCAGCTTAAGATGGTAATTTGTAGCGGCCGCTTTACCGTGAGTGACAATT TCCACTCAAAATTTTGTAGTTCAAAAAGATAAATGTTTCCTTGGC