Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0720900-04
CDS Infomation	cds chromosome:IRGSP-1.0:2:29913753:29916213:1 gene:Os02g0720900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os02t0720900-01);Hypothetical protein. (Os02t0720900-02);Similar to Aspartic proteinase nepenthesin-1. (Os02t0720900-04)
Sequence	GGACGTGCCGGTGAATTTTGTGCAGATTTCCAGTACCTGAACAGCACGGGCCTGCACCTT GAGCTGCACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGCCGACCTCCCGTTC ACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGCGCGCCTCGCCAAG ACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGGCCTCGCCGGCTCC CTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAACTACGTGACGCGC ATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACACGGGCTCCTCGCTC ACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTCCGGCCCGGTGTTC AACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCAGCAGTGCAGCGAC CTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGTCTGCATCTACCAG GCCAGCTACGGCGACAGCTCCTTCTCCGTCGGCTACCTCAGCAAGGACACCGTCTCGTTC GGCTCGACGTCGCTGCCAAACTTCTACTACGGCTGTGGCCAGGACAACGAGGGGTTGTTC GGCCGATCCGCCGGGCTCATCGGCCTCGCCCGCAACAAGCTCTCGCTCCTGTACCAGCTC GCGCCAAGCCTTGGCTACTCCTTCACCTACTGCCTCCCGTCGTCGTCGTCATCGGGGTAC CTGTCGCTCGGGTCGTACAACCCGGGGCAATACTCGTACACGCCGATGGTGTCCAGCTCG CTCGACGACTCGCTCTACTTCATCAAGCTGTCCGGGATGACGGTCGCCGGGAATCCGCTG TCCGTGTCGTCGTCGGCGTACTCCAGCCTGCCGACGATCATCGACTCCGGCACGGTGATC ACGCGCCTGCCGACGAGCGTGTACTCGGCGCTGAGCAAGGCGGTGGCGGCGGCCATGAAG GGGACGTCCCGCGCGTCGGCGTACTCCATCCTCGACACGTGCTTCAAGGGCCAGGCCTCG CGGGTGAGCGCGCCGGCGGTCACCATGTCCTTCGCCGGCGGCGCGGCGCTCAAGCTGTCG GCGCAGAACCTCCTCGTCGACGTCGACGACTCCACCACGTGCCTGGCGTTCGCGCCGGCC AGGAGCGCCGCCATCATCGGGAACACGCAGCAGCAGACGTTCAGCGTCGTCTACGACGTC AAGAGCAGCAGGATCGGGTTCGCCGCCGGCGGCTGCAGCTGA

Peptide Sequence

PEP ID	Os02t0720900-04
PEP Infomation	pep chromosome:IRGSP-1.0:2:29913753:29916213:1 gene:Os02g0720900 transcript:Os02t0720900-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os02t0720900-01);Hypothetical protein. (Os02t0720900-02);Similar to Aspartic proteinase nepenthesin-1. (Os02t0720900-04)
Sequence	GRAGEFCADFQYLNSTGLHLELHHPRSPCSPAPVPADLPFTAVLTHDDARISSLAARLAK TPSARATSLDADADAGLAGSLASVPLSPGASVGVGNYVTRMGLGTPATQYVMVVDTGSSL TWLQCSPCLVSCHRQSGPVFNPKSSSTYASVGCSAQQCSDLPSATLNPSACSSSNVCIYQ ASYGDSSFSVGYLSKDTVSFGSTSLPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLYQL APSLGYSFTYCLPSSSSSGYLSLGSYNPGQYSYTPMVSSSLDDSLYFIKLSGMTVAGNPL SVSSSAYSSLPTIIDSGTVITRLPTSVYSALSKAVAAAMKGTSRASAYSILDTCFKGQAS RVSAPAVTMSFAGGAALKLSAQNLLVDVDDSTTCLAFAPARSAAIIGNTQQQTFSVVYDV KSSRIGFAAGGCS

Transcript Sequence

Transcript ID	Os02t0720900-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:29913753:29916213:1 gene:Os02g0720900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os02t0720900-01);Hypothetical protein. (Os02t0720900-02);Similar to Aspartic proteinase nepenthesin-1. (Os02t0720900-04)
Sequence	ATTGTTTGGACAATTGGATCATGTGATGACATATCCACACTCGATTGGGAACGGAAATCA TATGAGCTGGGACATTTATACAATCTGATGCCCAGTACTTCTCCCTAGTTGTATAATGTC CGTACGTCTCGTTATACGTCACTGTCCAGTCACAAGACGGCTACTACTGTAAAAAATTGA CGACAAGATGGCGCAACGGAACTGATGGCCATGTTTAACGAGCTACTCCCTCCGGTTCTA TATAATAATTAATGTTTTGGATAAGATTGATGTCAAACTTTTATAACTTTGACTATCAAC AACTTTAAAAATATTTAGTTTAAAGAACATACGTAGATTTGTCTTTCAAAACACTATAAT AAAAGTAAACATGCATTTATTTATTGTGTATATTATAATAGAAAATATAAGGTCAAATAT ATATTTTGTAAACCGTGTCATTGTCCAAACCGTCAAATAAAATGAAACCGGAGGGAGTAT AGTGTATTTTCAATCATCAATTAAATGCATTGTTGTTTATGTGGCTTATTTGAAAACATA AAAATGACACCTCCCATTAATTGCAAATGGCCTTATAGCCGCGGCAGAATTTGTTTAGAA TCTCTAATTTTAAAGTAGTTTTTTTTTGTCATGGTTGCGGTAAAAATTGGATGAATTGAC GCGGGCGAATTAAGGACGTGCCGGTGAATTTTGTGCAGATTTCCAGTACCTGAACAGCAC GGGCCTGCACCTTGAGCTGCACCACCCGCGGAGCCCCTGCTCGCCGGCGCCGGTCCCGGC CGACCTCCCGTTCACGGCGGTGCTCACCCACGACGATGCGCGCATCTCGTCGCTGGCGGC GCGCCTCGCCAAGACGCCGTCGGCGCGCGCCACCTCCCTGGACGCCGACGCCGACGCCGG CCTCGCCGGCTCCCTCGCGTCCGTGCCGCTCAGCCCCGGCGCGTCCGTGGGCGTGGGCAA CTACGTGACGCGCATGGGCCTCGGCACGCCGGCGACGCAGTACGTGATGGTCGTGGACAC GGGCTCCTCGCTCACCTGGCTGCAGTGCTCGCCGTGCCTCGTGTCGTGCCACCGGCAGTC CGGCCCGGTGTTCAACCCCAAGTCGTCGAGCACCTACGCCTCCGTGGGGTGCTCCGCGCA GCAGTGCAGCGACCTCCCCTCCGCCACGCTCAACCCGTCGGCTTGCTCCTCCTCCAACGT CTGCATCTACCAGGCCAGCTACGGCGACAGCTCCTTCTCCGTCGGCTACCTCAGCAAGGA CACCGTCTCGTTCGGCTCGACGTCGCTGCCAAACTTCTACTACGGCTGTGGCCAGGACAA CGAGGGGTTGTTCGGCCGATCCGCCGGGCTCATCGGCCTCGCCCGCAACAAGCTCTCGCT CCTGTACCAGCTCGCGCCAAGCCTTGGCTACTCCTTCACCTACTGCCTCCCGTCGTCGTC GTCATCGGGGTACCTGTCGCTCGGGTCGTACAACCCGGGGCAATACTCGTACACGCCGAT GGTGTCCAGCTCGCTCGACGACTCGCTCTACTTCATCAAGCTGTCCGGGATGACGGTCGC CGGGAATCCGCTGTCCGTGTCGTCGTCGGCGTACTCCAGCCTGCCGACGATCATCGACTC CGGCACGGTGATCACGCGCCTGCCGACGAGCGTGTACTCGGCGCTGAGCAAGGCGGTGGC GGCGGCCATGAAGGGGACGTCCCGCGCGTCGGCGTACTCCATCCTCGACACGTGCTTCAA GGGCCAGGCCTCGCGGGTGAGCGCGCCGGCGGTCACCATGTCCTTCGCCGGCGGCGCGGC GCTCAAGCTGTCGGCGCAGAACCTCCTCGTCGACGTCGACGACTCCACCACGTGCCTGGC GTTCGCGCCGGCCAGGAGCGCCGCCATCATCGGGAACACGCAGCAGCAGACGTTCAGCGT CGTCTACGACGTCAAGAGCAGCAGGATCGGGTTCGCCGCCGGCGGCTGCAGCTGAGAACG CCGAGAGCGCCGCCGAACGCGCACCCAGGCATGGTCCGCATGGATACTTGGGTAAATTAA TGGGCAATCCATTTGCTATTGGCTATACTAGCTAGCACGCCATTCATCAATTCAACCACA CAAGCTGTTACATAAGCATGGGGATGAACATATCACAAGGTAGATAAAAACGAATTGGTA AAGGTGTTTGCTCTAGCGCTTAGATAAGAAAACACAACTCAAAAACAATATTAGCGTAAT GTTAATTAATTTATGTTGTCGAGGCCAGGGGGTACAGAGTATTTGAAAGTGGAACAGCAG AACTCCAAATATGATACACTACACAAATCCAGTAGAGGTGACATATATAGCTTGTCATGT AGTAATTCTTTGGCAAGTACTGGCCGAAATGTTTACTCTGTAAATGTAAATTAATGGGTG TGTGTGTGCTGCGTTTGTAGCTTCTTCTTTAGTAAGTACAAGAGCTCCAAAACTGTAAGC C