Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0714500-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:29621424:29624437:1 gene:Os02g0714500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0714500-01);Similar to binding protein. (Os02t0714500-02);Similar to predicted protein. (Os02t0714500-03)
Sequence	CTAGGTGCCACAAGAATGGCTTCTGCCTGTAGTGGTGGAATGGCCATTGAGTATTATGCA GCAGGGGATTTTAGTAATGCAAAACAACTTTTTGATGGTGTTGCTGGCCTATACCGTCAA GAAGGTTGGGCCACTTTACTTTGGGAAAACCTAGGTTACTTGAGAGAATGTGCAAGGAAA CTTAAGTCTCTGAAGGACTTTATCAGTTATTCACTTGAGATGGCTGCATTACCTTTATTC TCTGGCAGTGGACAGGGAAATTCAGAAAATAAAAGGAAAAATGGACCAGCAGGATCTCCT ACCATTTCCAGTAGAGAGCTTATACAGCAGGAAGTTATTAATATCTTGGAAGGAAAGCAT GCATCGGAGAACACTGATGATGAATTTGATCTTCATTTGATGGAAGAATCTACTCACCTC GATATTGATCAAATAAGTCCACTAAGGATAGTGTTTCTCGCATCTGTTGCTTTTCACGAT CAATCTGTAAAACCTGATTCACCAATGCTTGTCAGTGTCTCTCTACAGTCTCATCTTCCT TGTCCAGTTATGATTGATAAGTTGGAGGTTCAGTTTAACCAATCCGACTGTAACTTTGTT ATAGTTAGTGCACAGGAAGATTGTTCTGCATCAAATTCACATGTTCATGATGGAGCTGTT CAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCA GGACAGAGTGGAAAGCTGGAATGTTTGGCGGTGAAGGCAACAATAAGTAAACGTCTTGTA GTTTGCTGCCAAGCGGAAAGTCCTGTTTCAATGGGAGAATTTTCATTGTGGAAATTTGAG GACCAAGTAGAGGCATTACCTATGAAGGACAATGTACTTGCTTTTTCTGGGCAGAAACTG ATCCAAGTTGAAGAGCCAGATGCTCAAGTTGACCTTGTCTTAGATTGTCCTGGTCCTGCA TTGGTTGGAGAATTATTTACAGTCCCAGTGACCATATTGTCAAAAGGACACGCAGTTCAT TCTGGTGAACTGAAAATCAACCTTGTCGATGCCAAAGGTGGAGGCCTTTTGATGAGTCCT AGGGAAGCAGAAGAATCTGAAAGTCATCATGTTGAACTTCTTGGTGTCTCAGATGTGACC ACGGAAAATGGGTCAAAGGAAGAAGTTGATAGCATAAGAAAAATCCAGCACTCGTTTGGG GTTGTATCTGTTCCCACATTATATGCAGGTGATTCCTGGTCATGCAAATTGGAAATAAAA TGGCATCAAGCAATGTCAGTGATGTTCTATGTCTCACTTGGCTATTCCCTGGACTCGACT GAAGAAGCAGCACTGCACAGACTTAATGTGCACAGAAGCTTGCAAATTGAAGGTAAGATC CCCATGATAGTCAGTCAACAGTTTTTGAGACCATTTAGGCGAGAACCCCTGTTATTATCT AGGATCAGATCCTCAAGTGATGATGATAAAAAAAGTTCTCTTGCTTTCAACGAGTCAAAT ATGCTTATTTTAAGTGCTAGAAATTGCACAGAGGTACCTTTGCGGCTACACACGATGACT ATTGTGTCTAATGATGATGGAAAACAACTCTGCTCAGTGCAACAGATCAGTGGGATTTCC AATGAATACGCAGTTATTGCTCCTAGTGAAGAATACAAAGGAATATTTTCAGTGAATCCA CATACTATTAGTCCAAGCTTTTTTCTAGGTGAAATTTGCCTGAGCTGGTCAAGAGATTCA AGCATTGGAGAGAGTCAAGATAGCCGTGTTATAATGAAAGAAAGGTTACCTGAAGTTCAT ATCGAGGAGCCGCCACTTGTTGTGACCATGGAGTGCCCTCCTTATGCTATCCTTGGAATC CCTTTCACTTTTCATGTGAAGATCTACAATTCAACATCCTTACTTCAGGAAATCAAGTAC TCTCTTGTTGATTCCCAGAACTTCGTCTTCTCTGGGGCTCACAATCATGCTGCATCCATT CTGCCGAAAACCGAGCATATTGTTAGCCATAAGCTTGTGCCGCTTGGTTCTGGTTCCCAG CAGCTGCCAAGGATAACAATAACTTCAGTGAGGTATTCTGCTGCACTGACTCCTTCAGCC TCAGCCGCAACTGTCTTTGTATATCCCAGCGAGCCGAAATTCAATTTGGAAAAGGGCTAT TCGTCAACTGATCCGTGCGTTAGCTAG

Peptide Sequence

PEP ID	Os02t0714500-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:29621424:29624437:1 gene:Os02g0714500 transcript:Os02t0714500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0714500-01);Similar to binding protein. (Os02t0714500-02);Similar to predicted protein. (Os02t0714500-03)
Sequence	LGATRMASACSGGMAIEYYAAGDFSNAKQLFDGVAGLYRQEGWATLLWENLGYLRECARK LKSLKDFISYSLEMAALPLFSGSGQGNSENKRKNGPAGSPTISSRELIQQEVINILEGKH ASENTDDEFDLHLMEESTHLDIDQISPLRIVFLASVAFHDQSVKPDSPMLVSVSLQSHLP CPVMIDKLEVQFNQSDCNFVIVSAQEDCSASNSHVHDGAVQTPLTLFTDKWMRLTHEVKP GQSGKLECLAVKATISKRLVVCCQAESPVSMGEFSLWKFEDQVEALPMKDNVLAFSGQKL IQVEEPDAQVDLVLDCPGPALVGELFTVPVTILSKGHAVHSGELKINLVDAKGGGLLMSP REAEESESHHVELLGVSDVTTENGSKEEVDSIRKIQHSFGVVSVPTLYAGDSWSCKLEIK WHQAMSVMFYVSLGYSLDSTEEAALHRLNVHRSLQIEGKIPMIVSQQFLRPFRREPLLLS RIRSSSDDDKKSSLAFNESNMLILSARNCTEVPLRLHTMTIVSNDDGKQLCSVQQISGIS NEYAVIAPSEEYKGIFSVNPHTISPSFFLGEICLSWSRDSSIGESQDSRVIMKERLPEVH IEEPPLVVTMECPPYAILGIPFTFHVKIYNSTSLLQEIKYSLVDSQNFVFSGAHNHAASI LPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAATVFVYPSEPKFNLEKGY SSTDPCVS

Transcript Sequence

Transcript ID	Os02t0714500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:29621424:29624437:1 gene:Os02g0714500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os02t0714500-01);Similar to binding protein. (Os02t0714500-02);Similar to predicted protein. (Os02t0714500-03)
Sequence	GCCTAGGTGCCACAAGAATGGCTTCTGCCTGTAGTGGTGGAATGGCCATTGAGTATTATG CAGCAGGGGATTTTAGTAATGCAAAACAACTTTTTGATGGTGTTGCTGGCCTATACCGTC AAGAAGGTTGGGCCACTTTACTTTGGGAAAACCTAGGTTACTTGAGAGAATGTGCAAGGA AACTTAAGTCTCTGAAGGACTTTATCAGTTATTCACTTGAGATGGCTGCATTACCTTTAT TCTCTGGCAGTGGACAGGGAAATTCAGAAAATAAAAGGAAAAATGGACCAGCAGGATCTC CTACCATTTCCAGTAGAGAGCTTATACAGCAGGAAGTTATTAATATCTTGGAAGGAAAGC ATGCATCGGAGAACACTGATGATGAATTTGATCTTCATTTGATGGAAGAATCTACTCACC TCGATATTGATCAAATAAGTCCACTAAGGATAGTGTTTCTCGCATCTGTTGCTTTTCACG ATCAATCTGTAAAACCTGATTCACCAATGCTTGTCAGTGTCTCTCTACAGTCTCATCTTC CTTGTCCAGTTATGATTGATAAGTTGGAGGTTCAGTTTAACCAATCCGACTGTAACTTTG TTATAGTTAGTGCACAGGAAGATTGTTCTGCATCAAATTCACATGTTCATGATGGAGCTG TTCAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAAC CAGGACAGAGTGGAAAGCTGGAATGTTTGGCGGTGAAGGCAACAATAAGTAAACGTCTTG TAGTTTGCTGCCAAGCGGAAAGTCCTGTTTCAATGGGAGAATTTTCATTGTGGAAATTTG AGGACCAAGTAGAGGCATTACCTATGAAGGACAATGTACTTGCTTTTTCTGGGCAGAAAC TGATCCAAGTTGAAGAGCCAGATGCTCAAGTTGACCTTGTCTTAGATTGTCCTGGTCCTG CATTGGTTGGAGAATTATTTACAGTCCCAGTGACCATATTGTCAAAAGGACACGCAGTTC ATTCTGGTGAACTGAAAATCAACCTTGTCGATGCCAAAGGTGGAGGCCTTTTGATGAGTC CTAGGGAAGCAGAAGAATCTGAAAGTCATCATGTTGAACTTCTTGGTGTCTCAGATGTGA CCACGGAAAATGGGTCAAAGGAAGAAGTTGATAGCATAAGAAAAATCCAGCACTCGTTTG GGGTTGTATCTGTTCCCACATTATATGCAGGTGATTCCTGGTCATGCAAATTGGAAATAA AATGGCATCAAGCAATGTCAGTGATGTTCTATGTCTCACTTGGCTATTCCCTGGACTCGA CTGAAGAAGCAGCACTGCACAGACTTAATGTGCACAGAAGCTTGCAAATTGAAGGTAAGA TCCCCATGATAGTCAGTCAACAGTTTTTGAGACCATTTAGGCGAGAACCCCTGTTATTAT CTAGGATCAGATCCTCAAGTGATGATGATAAAAAAAGTTCTCTTGCTTTCAACGAGTCAA ATATGCTTATTTTAAGTGCTAGAAATTGCACAGAGGTACCTTTGCGGCTACACACGATGA CTATTGTGTCTAATGATGATGGAAAACAACTCTGCTCAGTGCAACAGATCAGTGGGATTT CCAATGAATACGCAGTTATTGCTCCTAGTGAAGAATACAAAGGAATATTTTCAGTGAATC CACATACTATTAGTCCAAGCTTTTTTCTAGGTGAAATTTGCCTGAGCTGGTCAAGAGATT CAAGCATTGGAGAGAGTCAAGATAGCCGTGTTATAATGAAAGAAAGGTTACCTGAAGTTC ATATCGAGGAGCCGCCACTTGTTGTGACCATGGAGTGCCCTCCTTATGCTATCCTTGGAA TCCCTTTCACTTTTCATGTGAAGATCTACAATTCAACATCCTTACTTCAGGAAATCAAGT ACTCTCTTGTTGATTCCCAGAACTTCGTCTTCTCTGGGGCTCACAATCATGCTGCATCCA TTCTGCCGAAAACCGAGCATATTGTTAGCCATAAGCTTGTGCCGCTTGGTTCTGGTTCCC AGCAGCTGCCAAGGATAACAATAACTTCAGTGAGGTATTCTGCTGCACTGACTCCTTCAG CCTCAGCCGCAACTGTCTTTGTATATCCCAGCGAGCCGAAATTCAATTTGGAAAAGGGCT ATTCGTCAACTGATCCGTGCGTTAGCTAGACTTGTATATACTCAGATACTCTGGCAGCTC TTAGCTTTGTTCCGGAGAAGCGAGGTATGCTCCTGAAAAAAACACGCCAGTTTTATCTTA ATTCTTGAATAGGCCTGGAGCAGATTCTGTTGGTGAACAGCGGTTGGATCATTGCAAAAG TTTTGGCATTCTTTTCAGGTGTTGATTTCGTATACCTTTTTGGATTGACCACATTTCTGT AACTTACGATTTTTGTACCGTTGATTTTGGCTAAGGATAATCAATCATACACACAAGACG GGCTGGTGTAAATTAGCACCCCACTAGAGACAAGTGGGGAATAAACTAGTCCCATGTCTC CCATTAGAACTCGAGAAATTTTCTTGTCTTC