Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0714200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:29604459:29610149:-1 gene:Os02g0714200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 1, PFP-alpha subunit 1 description:Similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK). (Os02t0714200-01)
Sequence	ATGGACTCCGACTACGGCGTGCCGCGCGAGCTCTCGGAGGTGCAGAAGAAGCGCGCGCTC TACCAGCCCGAGCTGCCCCCCTGCCTCCAGGGCACCACTGTGAGAGTGGAGTATGGTGAC GCTGCAATTGCTGCTGATCCTGCAGGCGCTCATGTGATCAGCCACGCGTTCCCCCACACA TACGGGCAGCCCCTGGCCCATTTTCTCCGGAAGACGGCTAATGTCCCCGATGCTACTGTC ATATCAGAGCATCCTGTTGTCAGGGTTGGTGTTGTTTTCTGCGGAAGGCAGTCCCCGGGA GGCCATAATGTCATCTGGGGACTCCATGAGGCAATTAAGGCTCACAACCCAAACAGCAAA CTTATTGGTTTTCTTGGTGGAAGTGATGGTCTTCTCGCACAGAAAACTTTGGAGATCACC GACGAAGTTCTTTCTTCATATAAAAACCAAGGTGGTTATGATATGCTTGGCCGGACAAAG GATCAAATTAGAACAACAGAGCAGGTCAATGGTGCCATGGCTAGTTGTCAGGCTTTGAAG TTGGATGCTTTAGTAATCATTGGAGGTGTTACATCCAATACGGATGCTGCTCAACTTGCT GAGACTTTTGCTGAGGCTAAGTGTGCAACGAAGGTTGTAGGTGTTCCTGTAACTTTGAAT GGGGACCTTAAGAATCAGTTTGTTGAGACAACCGTTGGTTTTGATACCATATGCAAGGTG AACTCACAACTTATAAGCAATGTATGCACCGATGCTCTTTCGGCTGAGAAGTATTACTAC TTTATTCGCATGATGGGGCGGAAGGCTTCTCATGTGGCATTGGAGTGTGCTCTTCAATCA CATCCGAATATGGTTATCCTAGGTGAGGAGGTTGCTGCATCAAAACTTACCATCTTTGAT ATCACGAAGCAGATATGTGATGCAGTTCAGGCAAGGGCTGAGAAGGATAAGTATCACGGA GTTGTACTTATTCCGGAGGGACTCGTGGAGAGTATTCCTGAATTATATGCTTTGCTTCAG GAAATTCATGGGCTTCACGGCAAAGGTGTTTCCATGGAGAATATCTCCTCACAGCTTTCA CCTTGGGCATCTGCACTATTTGAGTTTTTGCCCCCATTTATTAGGAAGCAGCTGCTTCTC CATCCTGAATCTGATGACTCAGCTCAACTTTCTCAGATTGAAACCGAAAAACTTTTGGCC CAATTAGTTGAGGATGAAATGAACAGGCGTATGAAGGAAGGCACTTACAAAGGAAAGAAA TTCAATGCGATCTGTCACTTTTTTGGCTACCAAGCTAGGGGTTCACTGCCTTCAAAGTTT GACTGCGATTACGCCTATGTTCTTGGGCACGTGTGCTACCACATCTTAGCTGCTGGTTTG AATGGTTACATGGCTACTGTGACAAATCTTAAGAGTCCTGCGAACAAATGGCGATGTGGT GCGGCTCCGATTTCGTCTATGATGACCGTGAAGAGATGGTCACGTGGTCCTGCGGCTACT CAAATAGGGAAACCTGCTGTCCATATGGCTACTGTCGACTTGAAAGGCAAAGCATTCGAG CTATTGAGGAACAATTCTACCAGCTTCTTAATCGACGACATCTACAGAAACCCAGGACCA CTCCAATTCGAAGGAGCAGGTGCTGATTCAAAGCCTATTTCACTGTGCGTGGAAGATCAA GACTATATGGGCAGGATCAAGAAACTCCAGGAATACTTGGAGAAGGTGAAAAGCATCGTG AAGCCTGGGTGCTCGCAGGATGTTCTCAAGGCAGCGCTGAGCGCTATGTCATCTGTGACC GAGACATTGGCGATCATGACATCGTCTTCCACTGGCCAGGGAACCCCACTCTGA

Peptide Sequence

PEP ID	Os02t0714200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:29604459:29610149:-1 gene:Os02g0714200 transcript:Os02t0714200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 1, PFP-alpha subunit 1 description:Similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK). (Os02t0714200-01)
Sequence	MDSDYGVPRELSEVQKKRALYQPELPPCLQGTTVRVEYGDAAIAADPAGAHVISHAFPHT YGQPLAHFLRKTANVPDATVISEHPVVRVGVVFCGRQSPGGHNVIWGLHEAIKAHNPNSK LIGFLGGSDGLLAQKTLEITDEVLSSYKNQGGYDMLGRTKDQIRTTEQVNGAMASCQALK LDALVIIGGVTSNTDAAQLAETFAEAKCATKVVGVPVTLNGDLKNQFVETTVGFDTICKV NSQLISNVCTDALSAEKYYYFIRMMGRKASHVALECALQSHPNMVILGEEVAASKLTIFD ITKQICDAVQARAEKDKYHGVVLIPEGLVESIPELYALLQEIHGLHGKGVSMENISSQLS PWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEDEMNRRMKEGTYKGKK FNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLKSPANKWRCG AAPISSMMTVKRWSRGPAATQIGKPAVHMATVDLKGKAFELLRNNSTSFLIDDIYRNPGP LQFEGAGADSKPISLCVEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSVT ETLAIMTSSSTGQGTPL

Transcript Sequence

Transcript ID	Os02t0714200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:29604459:29610149:-1 gene:Os02g0714200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 1, PFP-alpha subunit 1 description:Similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK). (Os02t0714200-01)
Sequence	CATCGTCCCCGCTAGTCGCCGCCAGTCACCAAGCCCCGAGCCCACCCCCCCAAGCTACCA GCACAGAACGAATCGGAGCGCCGCGCCGCGCCGCGCTGCGTCACCGGCGATGGACTCCGA CTACGGCGTGCCGCGCGAGCTCTCGGAGGTGCAGAAGAAGCGCGCGCTCTACCAGCCCGA GCTGCCCCCCTGCCTCCAGGGCACCACTGTGAGAGTGGAGTATGGTGACGCTGCAATTGC TGCTGATCCTGCAGGCGCTCATGTGATCAGCCACGCGTTCCCCCACACATACGGGCAGCC CCTGGCCCATTTTCTCCGGAAGACGGCTAATGTCCCCGATGCTACTGTCATATCAGAGCA TCCTGTTGTCAGGGTTGGTGTTGTTTTCTGCGGAAGGCAGTCCCCGGGAGGCCATAATGT CATCTGGGGACTCCATGAGGCAATTAAGGCTCACAACCCAAACAGCAAACTTATTGGTTT TCTTGGTGGAAGTGATGGTCTTCTCGCACAGAAAACTTTGGAGATCACCGACGAAGTTCT TTCTTCATATAAAAACCAAGGTGGTTATGATATGCTTGGCCGGACAAAGGATCAAATTAG AACAACAGAGCAGGTCAATGGTGCCATGGCTAGTTGTCAGGCTTTGAAGTTGGATGCTTT AGTAATCATTGGAGGTGTTACATCCAATACGGATGCTGCTCAACTTGCTGAGACTTTTGC TGAGGCTAAGTGTGCAACGAAGGTTGTAGGTGTTCCTGTAACTTTGAATGGGGACCTTAA GAATCAGTTTGTTGAGACAACCGTTGGTTTTGATACCATATGCAAGGTGAACTCACAACT TATAAGCAATGTATGCACCGATGCTCTTTCGGCTGAGAAGTATTACTACTTTATTCGCAT GATGGGGCGGAAGGCTTCTCATGTGGCATTGGAGTGTGCTCTTCAATCACATCCGAATAT GGTTATCCTAGGTGAGGAGGTTGCTGCATCAAAACTTACCATCTTTGATATCACGAAGCA GATATGTGATGCAGTTCAGGCAAGGGCTGAGAAGGATAAGTATCACGGAGTTGTACTTAT TCCGGAGGGACTCGTGGAGAGTATTCCTGAATTATATGCTTTGCTTCAGGAAATTCATGG GCTTCACGGCAAAGGTGTTTCCATGGAGAATATCTCCTCACAGCTTTCACCTTGGGCATC TGCACTATTTGAGTTTTTGCCCCCATTTATTAGGAAGCAGCTGCTTCTCCATCCTGAATC TGATGACTCAGCTCAACTTTCTCAGATTGAAACCGAAAAACTTTTGGCCCAATTAGTTGA GGATGAAATGAACAGGCGTATGAAGGAAGGCACTTACAAAGGAAAGAAATTCAATGCGAT CTGTCACTTTTTTGGCTACCAAGCTAGGGGTTCACTGCCTTCAAAGTTTGACTGCGATTA CGCCTATGTTCTTGGGCACGTGTGCTACCACATCTTAGCTGCTGGTTTGAATGGTTACAT GGCTACTGTGACAAATCTTAAGAGTCCTGCGAACAAATGGCGATGTGGTGCGGCTCCGAT TTCGTCTATGATGACCGTGAAGAGATGGTCACGTGGTCCTGCGGCTACTCAAATAGGGAA ACCTGCTGTCCATATGGCTACTGTCGACTTGAAAGGCAAAGCATTCGAGCTATTGAGGAA CAATTCTACCAGCTTCTTAATCGACGACATCTACAGAAACCCAGGACCACTCCAATTCGA AGGAGCAGGTGCTGATTCAAAGCCTATTTCACTGTGCGTGGAAGATCAAGACTATATGGG CAGGATCAAGAAACTCCAGGAATACTTGGAGAAGGTGAAAAGCATCGTGAAGCCTGGGTG CTCGCAGGATGTTCTCAAGGCAGCGCTGAGCGCTATGTCATCTGTGACCGAGACATTGGC GATCATGACATCGTCTTCCACTGGCCAGGGAACCCCACTCTGAGTCAAATGGATTACTAA ATCCACATTCGCTTGTGTCATCTGACATGTGGGGTTAGAAACAGTGATGTTGCAACCCCA CGGCTTTCTTTTTCGTGTTTTTTCTTTGGAGAGTTTTGCCATTTTTGAGCCGGTAGCGTG AGTCTGCTATTGATGTGTTTGGTTGGACTGGAATAATAATTGTTCAGACAGCGATGTTCT TAAATAAACCAAATTTTGGTAGGC