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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0711300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:29468413:29469191:1 gene:Os02g0711300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os02t0711300-01)
Sequence

ATGTCTTTGGTGCTCTCGCGGATGCTGCTCGACAGGTTCTTCCCCGGCGCCGGCGGCGTC
GTCGCCGGTGAAGCCCGGCCGCCGATGGACTGGAGGGAGACGCCGGTGGCGCACGTGTTC
GAGATGGACCTCCCCGGGCTGGCCAAGGACCAGGTCGCCGTCGAGGTGGTGGACGGCCAC
ATCCTCCGCGTCCGCGCCGGCGGCGAACACGAGGACGCCAATAACGCAGCCAAGGCGGGG
AAGGCCAGCGGCGAGGAGGAGGAGGAAAACGACGGCGTGAGGTGGCATTGCAGGGAGAGG
GCGGCGGGGAGGCGGCGCGCGGCGGACGAGGCGAGCGCGCGGATGGCGGACGGGGTGCTC
ACGGTGACCGTGCCGAAGCGGAAGGGCAAGAAGCGGCACGCCGGCAACGGCAAGGCGGCC
GGCGACGACAAGCCAGTGTGCTGCCGCTTCTGGCCGTGA

Peptide Sequence

PEP ID

Os02t0711300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:29468413:29469191:1 gene:Os02g0711300 transcript:Os02t0711300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os02t0711300-01)
Sequence

MSLVLSRMLLDRFFPGAGGVVAGEARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGH
ILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAADEASARMADGVL
TVTVPKRKGKKRHAGNGKAAGDDKPVCCRFWP

Transcript Sequence

Transcript ID

Os02t0711300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:29468413:29469191:1 gene:Os02g0711300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein Hsp20 domain containing protein. (Os02t0711300-01)
Sequence

AAGTCGGAGTGAACTCGCAAGATTCACGCGAAGAAGCTTAGGAGAACATCAACAATGTCT
TTGGTGCTCTCGCGGATGCTGCTCGACAGGTTCTTCCCCGGCGCCGGCGGCGTCGTCGCC
GGTGAAGCCCGGCCGCCGATGGACTGGAGGGAGACGCCGGTGGCGCACGTGTTCGAGATG
GACCTCCCCGGGCTGGCCAAGGACCAGGTCGCCGTCGAGGTGGTGGACGGCCACATCCTC
CGCGTCCGCGCCGGCGGCGAACACGAGGACGCCAATAACGCAGCCAAGGCGGGGAAGGCC
AGCGGCGAGGAGGAGGAGGAAAACGACGGCGTGAGGTGGCATTGCAGGGAGAGGGCGGCG
GGGAGGCGGCGCGCGGCGGACGAGGCGAGCGCGCGGATGGCGGACGGGGTGCTCACGGTG
ACCGTGCCGAAGCGGAAGGGCAAGAAGCGGCACGCCGGCAACGGCAAGGCGGCCGGCGAC
GACAAGCCAGTGTGCTGCCGCTTCTGGCCGTGACACCGCCGAGGCCGCGGCGCGCGCCGG
CTCGTGTGCCCGCGTCGCGTCGCGTTGAGTCACCCGCACGACACGAGCCTGTAGTAGTAC
ATGTCAAGCCTACCCGTCAAAAATCTTGTCCTTTCGCCATTGGAATTGCCGTGCCAGTAT
GGCGCATGAGTGCACTTGTACAAAATATAAATTGGGCCTGTTTAGTTCCAAAGTTTTTTT
CTAAACTTCTAACTTTCCATCGC