Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0711100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:29463847:29465660:-1 gene:Os02g0711100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0711100-01)
Sequence	ATGCCTGACCAGCGGCCAAAGCGGCCGTCCGACTCGGTCGCCGCCGCCTCGCCGGCGGCG AAGCGCGCCCGCGACCCGTCCGCGCCGGCGTTCCCCACCTACAGGGACGCCCCCGACCTG CCCCCGAAGATCCGTCTCCTATGCGAGATCCTGGCGTCCTCGGCACCCGACGTCGACGCG GCGCTCGACGACGCCGACGTCCGCGTCACCTCCTCCGACGTCGAGCAGGTGCTCCGGTTC TCCTACGCCCACCCGCGCGCCGCCGTCGCCTTCTTCCGATGGGCGGGGCACCGGCACCTC CGCCACCAGCACTCCCCCTACTCGTGGAACCTCGTCGTCGACCTCCTCGGCAAGAACCGC CTGTTCGAGCCCATGTGGGACACCGTCTCCTCCATGCGGACCCAGGGCCTGCTCTCCCTG GCCACCTTCGCCTCCGTGTTCTCCTCCCTGGCGGCCAACCCGGCCAGCTCCCCACTCAGG GCGTTCGTGGAGCTGCCGATGTACGGCATGGACCGCGACACGCCGGCGCTCAACTCCCTC CTCTCCGCGCTCTGCCGCGCCTCCCGCCTGGACGACGCCCGCGCCGCGATCCCCGTGGCG CGCGCCGAGGCCGGCACCCGCCCCGACGCCGACTCCTACGCCATCCTTCTGGAGGGCTGC GAGGCTGCCGGCGACCCTCACGTTGCACGCGAGGTGTTCGACGAGATGCGGCACGTCATC GGATTCGATCCTGCCAATGTTCCTGCCTATGATTCTTTCCTCACTACACTGATTTCAAGT GGTTCCTCCACAGCGTTAATGGATGCGATGGACTATCTTGCTATCTTGCACCGGCAGAGG TGCTCACCTGGGGAGAAGTTCTTCCGCGCCGCACTGGCCGCACACCTCAAGGCGCGTGAA TTGCGCGGCGCGGTGGTGCTCTGGAACGACTTTGTCGTAAGGCGGGGACTCATCCCAGAT AAGGAAATGTATAGCACAATGATCATGCTGCAGGGCACTCTTGGGCATCCTGAGGTGATT GTTGAGTACCTTGATGAGATGACCTTTGATGGAGTGTTTCCAGATGCGGACACATACAAT ATGGTTTTCCAGTTCTTGCTGAAGGGGAGGAAACTCCGGGAGGCGTCGGCAATATTTAGT GAGATGGTCAAGAACGAGTTCTGGCCCAATGAGGCAAATTGTTCGCTCGCGCTTCGTATG TTCTTGGATACACGAGACTGGGATTCAGGGATCAAGTTGTGGAAATGCATGGTGGAGAAT GGGCTTCCACCATTGGAGGAGAGTGGGAACATGCTCGTATCAAAGCTAAAGGATGAGAGG TTACCCGAGGCATGTAAATATGCAGAAGACATGATTGATCGATGTATCAAGTTGAGCTCT TCCACAATGTCAAAGCTGAAGCAATGTCTGATGAAGGTTTATAAAGGACATATCCACGAT CACCTACTTAGAAAATGGAAGGCGCACTAG

Peptide Sequence

PEP ID	Os02t0711100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:29463847:29465660:-1 gene:Os02g0711100 transcript:Os02t0711100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0711100-01)
Sequence	MPDQRPKRPSDSVAAASPAAKRARDPSAPAFPTYRDAPDLPPKIRLLCEILASSAPDVDA ALDDADVRVTSSDVEQVLRFSYAHPRAAVAFFRWAGHRHLRHQHSPYSWNLVVDLLGKNR LFEPMWDTVSSMRTQGLLSLATFASVFSSLAANPASSPLRAFVELPMYGMDRDTPALNSL LSALCRASRLDDARAAIPVARAEAGTRPDADSYAILLEGCEAAGDPHVAREVFDEMRHVI GFDPANVPAYDSFLTTLISSGSSTALMDAMDYLAILHRQRCSPGEKFFRAALAAHLKARE LRGAVVLWNDFVVRRGLIPDKEMYSTMIMLQGTLGHPEVIVEYLDEMTFDGVFPDADTYN MVFQFLLKGRKLREASAIFSEMVKNEFWPNEANCSLALRMFLDTRDWDSGIKLWKCMVEN GLPPLEESGNMLVSKLKDERLPEACKYAEDMIDRCIKLSSSTMSKLKQCLMKVYKGHIHD HLLRKWKAH

Transcript Sequence

Transcript ID	Os02t0711100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:29463847:29465660:-1 gene:Os02g0711100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0711100-01)
Sequence	GGATAGGGCAAAAACCCCACCTCTGGACTTTGGCCACCTCTCTCCTCCCCCAATTCCACC ACTAGCCCTCGTGTCCCCGGCGCGGCGGCGGCGGCGGCGATGCCTGACCAGCGGCCAAAG CGGCCGTCCGACTCGGTCGCCGCCGCCTCGCCGGCGGCGAAGCGCGCCCGCGACCCGTCC GCGCCGGCGTTCCCCACCTACAGGGACGCCCCCGACCTGCCCCCGAAGATCCGTCTCCTA TGCGAGATCCTGGCGTCCTCGGCACCCGACGTCGACGCGGCGCTCGACGACGCCGACGTC CGCGTCACCTCCTCCGACGTCGAGCAGGTGCTCCGGTTCTCCTACGCCCACCCGCGCGCC GCCGTCGCCTTCTTCCGATGGGCGGGGCACCGGCACCTCCGCCACCAGCACTCCCCCTAC TCGTGGAACCTCGTCGTCGACCTCCTCGGCAAGAACCGCCTGTTCGAGCCCATGTGGGAC ACCGTCTCCTCCATGCGGACCCAGGGCCTGCTCTCCCTGGCCACCTTCGCCTCCGTGTTC TCCTCCCTGGCGGCCAACCCGGCCAGCTCCCCACTCAGGGCGTTCGTGGAGCTGCCGATG TACGGCATGGACCGCGACACGCCGGCGCTCAACTCCCTCCTCTCCGCGCTCTGCCGCGCC TCCCGCCTGGACGACGCCCGCGCCGCGATCCCCGTGGCGCGCGCCGAGGCCGGCACCCGC CCCGACGCCGACTCCTACGCCATCCTTCTGGAGGGCTGCGAGGCTGCCGGCGACCCTCAC GTTGCACGCGAGGTGTTCGACGAGATGCGGCACGTCATCGGATTCGATCCTGCCAATGTT CCTGCCTATGATTCTTTCCTCACTACACTGATTTCAAGTGGTTCCTCCACAGCGTTAATG GATGCGATGGACTATCTTGCTATCTTGCACCGGCAGAGGTGCTCACCTGGGGAGAAGTTC TTCCGCGCCGCACTGGCCGCACACCTCAAGGCGCGTGAATTGCGCGGCGCGGTGGTGCTC TGGAACGACTTTGTCGTAAGGCGGGGACTCATCCCAGATAAGGAAATGTATAGCACAATG ATCATGCTGCAGGGCACTCTTGGGCATCCTGAGGTGATTGTTGAGTACCTTGATGAGATG ACCTTTGATGGAGTGTTTCCAGATGCGGACACATACAATATGGTTTTCCAGTTCTTGCTG AAGGGGAGGAAACTCCGGGAGGCGTCGGCAATATTTAGTGAGATGGTCAAGAACGAGTTC TGGCCCAATGAGGCAAATTGTTCGCTCGCGCTTCGTATGTTCTTGGATACACGAGACTGG GATTCAGGGATCAAGTTGTGGAAATGCATGGTGGAGAATGGGCTTCCACCATTGGAGGAG AGTGGGAACATGCTCGTATCAAAGCTAAAGGATGAGAGGTTACCCGAGGCATGTAAATAT GCAGAAGACATGATTGATCGATGTATCAAGTTGAGCTCTTCCACAATGTCAAAGCTGAAG CAATGTCTGATGAAGGTTTATAAAGGACATATCCACGATCACCTACTTAGAAAATGGAAG GCGCACTAGGTATTTTTACCTCTTCTTTGTGGTTAAATATAACAGGGGAAGAAAAGCTAA CATTTTGCCCCCAAGTAGCTGAGTAGCGGTTGATGGTGATTTTCTGGTTGCAACTGCAAC TATAGGAACATTATGCGCATAGCATCAGTAAAAGTTGCAAAGCATTGGCTCAAAGCTAGG TGTACAATGTAGTGACATATTTGGTAAGGTAGTTTGGTAAATTAAACTTGACTCTCCTAA TGTTTTTCTTTTGC