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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0708300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:29285009:29287551:1 gene:Os02g0708300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING-BOX1a description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0708300-01)
Sequence

ATGGACAAGGGCGACGTCGCCGTGGCCGTGCCCCCCTCCATCGCCGGCGCCTCCTCCTCC
GGGGCCAAGAAGGGCAAGCGCTTCGAGATCAAGAAGTGGAACGCTGTCTCCCTCTGGGCC
TGGGACATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTGTGAG
CACGCGCGCCGCTGGCCTTCCGCTCGCCCCCGCTCCGATCTGCTGTTCCTTTAG

Peptide Sequence

PEP ID

Os02t0708300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:29285009:29287551:1 gene:Os02g0708300 transcript:Os02t0708300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING-BOX1a description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0708300-01)
Sequence

MDKGDVAVAVPPSIAGASSSGAKKGKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCE
HARRWPSARPRSDLLFL

Transcript Sequence

Transcript ID

Os02t0708300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:29285009:29287551:1 gene:Os02g0708300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING-BOX1a description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0708300-01)
Sequence

GTCTCGTCCCAATCTACTCCTCCTCCTCGCGCTCCCCTCCCACCCTAGGGTTCGCCATGG
ACAAGGGCGACGTCGCCGTGGCCGTGCCCCCCTCCATCGCCGGCGCCTCCTCCTCCGGGG
CCAAGAAGGGCAAGCGCTTCGAGATCAAGAAGTGGAACGCTGTCTCCCTCTGGGCCTGGG
ACATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTGTGAGCACG
CGCGCCGCTGGCCTTCCGCTCGCCCCCGCTCCGATCTGCTGTTCCTTTAGATTCTAGGGT
TTCTTCTTAGCTTGTTGGTATGGCTTGTGATGACGCGGGTGCGCGTGCGTGTGTTGTGTA
GGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGG
GGTAACATTGCTTCTTCTTAATCTCCCGTTAATTCTAATTCTGTGCCGATGCAGCAGTAG
ATGTAAGTGCTGATTCAGCCATGAATTGCATGGTTTCAGTTAGCTGAAGCCGGTCTTGCC
CTGTTTATTCTGAATTTAGTTTTGACTTTGATTTCATAGTTCGATTGAGTCAAATTAATC
CATGTGTCAACCTGTTACTGTGCTCTCAGTACACGTCGCCTTGTGTTGTTTGTCATTGGT
TTGCTCATTTGATAATGATTTATCAGAATCTGGGGATCGTGCTTTCCCAAGACTGGTTAT
ATGCTGCTAGGAATGTTTTTCTCTCGAATTTCATAAAATCCTAACATCTGTTTTGCTATA
CGCTATTTTGAATCCTTCGTTCTGGAATTGAGGAATGCTTCTAGTTTTCATGCTCTGGAG
TATTGGTGAATTGAGTTGTAGTTTAATGGATCCTGCATTATCTGCCGCCTCTATGTCATT
TATTGGTACCAGAGCATGATTTTTAATATCGTGTATAATATCATTTGTTGCTGATCATGT
GATTTGCAATACCATGTTATTATTAGTGATTCTGATAATTGCAAGTTCTTGTGATCTGGA
GTAGTTTTGACTGGACATGTATCAAATGAGTGCAATGTGATTATCTTTTCTATTCTTTTA
TATGTACTGGTTATATTCATAGTTGGAAATTTGTACTATAATTATGCATGGTTTGCTATA
TTGGTTTGTCTCTTGGTTTTTTATCTAAGTCTATAATTATATAATATGTCGCAGTTAGCT
TTGGACGTGACATGGCCCTTGTAGAATATGTTGAATTTATCTTTCATAAAGAAGTATGTA
GTTATGATAGGATAATTGAATGGCTACTGGCTAGGAGTACCTTCTTCTGGATTAACCATC
TACTGTTCAATTATAATTATACCTTGAACTATGCACACATGAAACTCAAATATGATAATA
CAGTTCATGTCTGGGTTTCCTAGTTCCTATGATTTGTCAAAGAGAATCACTGGAATGTGG
GTTGGGGAGGGTGGGTGAGTGTTCATGTTAGCTGTGTCAATTGATGGAAGTGAATTCTTG
CATCTGGAACTAGTTGAAGTTAGTGGTGTATATTTTCATCAAAGGCTTTTAGCTACAATT
GCTTTATATATTTGTATGAGATTCTTGTGTGTGGATCTTCCTTGGCTACCCGGCATGTTA
ATATGTTCTTCTTCTGCCCACAGTTTAATCTACTTTGACTGATCTTATGTTTACAGCATG
TTGTTGTTTAGGGATATGTACACTTGCACCTTCTGTGTGCCCTCTGGATTATATGTTCAA
GTATTGTTTTGAATTAAACAATACTGACTTGCACAGTCAAATGCTATGTTCAATATATTT
ATAATACTGAAGTTTCTCTCCTGGGGGAGTATTATGGAACTTTGTTTTCTTTCCGTGTAA
CTGGATTCTTCTCGTCTTTTTGTGTTGCTTTTAGTGGATATTGCATTTTCGCAGTGAATT
AAATCGAGCTGTGAAGTCAACTATCCATGTACTGATGAACAATCTATCTTTGTTGTGTCA
GGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGACCCGTCAA
GTGTGCCCTCTAGACAACAGCGAGTGGGAGTTCCAGAAGTATGGTCACTAGACAATTCTC
TTTCGGGAGCAAAAGCGGCTTCAAGTTTCTCGTATCAAGTATTAGCACTAAGTGATAACT
AATGATTACGATGGGTAGGCTGCATTGTTAATGTTTCAGAAGCTTGTATTTTCGGTAGAA
ACATATCATGCTGGTAGCTCAGCGAATCTCCTCAAACTTATTTTCGCTGAAATCAAGCAG
CAGTTCGTATTTACTAAGTTTTTTTCTGCTCATGATGTTCCAGCGGTATAACTTTTTGC