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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0706600-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:29206676:29208686:-1 gene:Os02g0706600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 7 description:Similar to zinc finger homeodomain protein 1. (Os02t0706600-00)
Sequence

ATGGAGTACAAGAGATCATCGCATGTGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAC
GACGAGGAGGAAGACGAGGAGGAGCAAGGTCACCATCAGTACACGACGGCGGCGGCGCAG
CAGCAGCTGCACCCGCAGGTTCTTGGCTCGTCGGCTTCCTCGCCGTCGTCGTTGATGGAC
TCCGCCGCTTTCTCGAGGCCCCTCCTGCCTCCCAACCTGTCGCTCGTGTCGCCGTCGGCG
GCGGCGGCGGCGGCGCCCGGTGGATCCTACCTGCATGCGGCTCACCACCATGGGCAGGGA
AGAAGGGTGGAGGCGCCTGGTGGGGAGAGCCAGCACCATCTCCAGCGCCATCATGAGCCG
GCGAGAAATGGCGTTCTTGGCGGCGTCGCCGGTGCTCACGCGGCGTCTACGCTTGCCCTC
GTGGGTGGTGGTGGTGGTGGTCCGAGAGGCGGCGAGGGGGCGGCGGGCGAGGCGCCGACG
TGGAGGTACAGGGAGTGCCTCAAGAACCACGCGGCGCGGATGGGCGCGCACGTGCTCGAC
GGCTGCGGCGAGTTCATGTCGTCCCCTGGCGACGGCGCCGCGGCGCTGGCCTGCGCCGCG
TGCGGCTGCCACCGTAGCTTCCACCGCCGCGAGCCGGCGGTCGTCGCGCCGGCCTCGCTC
TCGCTCTGCCCCGCCTCCGCCTCCGCCTCCGCCGCCGCCGGCCTGGTGTCCCTATCCCCC
TCCGCGACGCCCACCGGCGCCAACTCCTCCCGGCTCATGCCGCTCCTCCTCGCCCCGCCG
CACATGCAGAAGCGCCCGCCCGTCCTCCCCGTGTCCCCGGCGTCTGCGCCCGCCGCGCTG
GCCGAGTCGTCAAGCGAGGAGCTGCGCCCGCCGCCGCTCCCCTCTTCCCACCCCCACGCG
CACGCGGCCGCCGTGGTGGCGGCGTCGGCCTCCGCGCCGCCGGGGCCGAGCAAGAAGCGC
TTCCGGACCAAGTTCACGGCGGAGCAGAAGGAGCGGATGCGTGAATTCGCGCACCGCGTC
GGGTGGCGCATCCACAAGCCCGACGCCGCCGCCGTCGACGCGTTCTGCGCCCAGGTCGGC
GTCTCCCGCCGCGTCCTCAAGGTGTGGATGCACAACAACAAACACCTCGCCAAGACGCCC
CCGTCGCCGACATCGCAGCCGCCGCCGCCGCCGCTCCACCACGATCCTTCTCCTCCTCCC
CCTCCTCACCACCACCACCACCACCATCACCACCACCACCCACCACAACACCATCAGCAG
CAGCAGCAGCAGCATGATGCATGA

Peptide Sequence

PEP ID

Os02t0706600-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:29206676:29208686:-1 gene:Os02g0706600 transcript:Os02t0706600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 7 description:Similar to zinc finger homeodomain protein 1. (Os02t0706600-00)
Sequence

MEYKRSSHVEEEEEEEEEEDDEEEDEEEQGHHQYTTAAAQQQLHPQVLGSSASSPSSLMD
SAAFSRPLLPPNLSLVSPSAAAAAAPGGSYLHAAHHHGQGRRVEAPGGESQHHLQRHHEP
ARNGVLGGVAGAHAASTLALVGGGGGGPRGGEGAAGEAPTWRYRECLKNHAARMGAHVLD
GCGEFMSSPGDGAAALACAACGCHRSFHRREPAVVAPASLSLCPASASASAAAGLVSLSP
SATPTGANSSRLMPLLLAPPHMQKRPPVLPVSPASAPAALAESSSEELRPPPLPSSHPHA
HAAAVVAASASAPPGPSKKRFRTKFTAEQKERMREFAHRVGWRIHKPDAAAVDAFCAQVG
VSRRVLKVWMHNNKHLAKTPPSPTSQPPPPPLHHDPSPPPPPHHHHHHHHHHHPPQHHQQ
QQQQHDA

Transcript Sequence

Transcript ID

Os02t0706600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:29206676:29208686:-1 gene:Os02g0706600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 7 description:Similar to zinc finger homeodomain protein 1. (Os02t0706600-00)
Sequence

CTTTCTCTCTCCTGTCACCTCTCTCCTCTGTTGGTCTCTCACTCTCACCATCTCCTCTTC
TGTTCTTCTCTTGCTTGGCTTGGCCTGGCCTTCTCTCTTTCCTCAGGATGCATGGATGGA
TAGATAGATAAGATAGCTAGGTAGCTCTCTCTCAAGGAAACATTCCCCACTTTATGCCAT
AATAATTAATACTATTGTTGTTGTTAGCCATATTGTTATTAGTAGTAGCAGTATCACTAA
CCAAGCCATGCATACTACTACTACCACCACCACAATCCATGCTTTTGAATCATCCTAATA
TTAGGCTACTAGCTAAGCTAGCTCTCTTACCCTAGAGAGCTAGAGACGCCATGGAGTACA
AGAGATCATCGCATGTGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGACGACGAGGAGG
AAGACGAGGAGGAGCAAGGTCACCATCAGTACACGACGGCGGCGGCGCAGCAGCAGCTGC
ACCCGCAGGTTCTTGGCTCGTCGGCTTCCTCGCCGTCGTCGTTGATGGACTCCGCCGCTT
TCTCGAGGCCCCTCCTGCCTCCCAACCTGTCGCTCGTGTCGCCGTCGGCGGCGGCGGCGG
CGGCGCCCGGTGGATCCTACCTGCATGCGGCTCACCACCATGGGCAGGGAAGAAGGGTGG
AGGCGCCTGGTGGGGAGAGCCAGCACCATCTCCAGCGCCATCATGAGCCGGCGAGAAATG
GCGTTCTTGGCGGCGTCGCCGGTGCTCACGCGGCGTCTACGCTTGCCCTCGTGGGTGGTG
GTGGTGGTGGTCCGAGAGGCGGCGAGGGGGCGGCGGGCGAGGCGCCGACGTGGAGGTACA
GGGAGTGCCTCAAGAACCACGCGGCGCGGATGGGCGCGCACGTGCTCGACGGCTGCGGCG
AGTTCATGTCGTCCCCTGGCGACGGCGCCGCGGCGCTGGCCTGCGCCGCGTGCGGCTGCC
ACCGTAGCTTCCACCGCCGCGAGCCGGCGGTCGTCGCGCCGGCCTCGCTCTCGCTCTGCC
CCGCCTCCGCCTCCGCCTCCGCCGCCGCCGGCCTGGTGTCCCTATCCCCCTCCGCGACGC
CCACCGGCGCCAACTCCTCCCGGCTCATGCCGCTCCTCCTCGCCCCGCCGCACATGCAGA
AGCGCCCGCCCGTCCTCCCCGTGTCCCCGGCGTCTGCGCCCGCCGCGCTGGCCGAGTCGT
CAAGCGAGGAGCTGCGCCCGCCGCCGCTCCCCTCTTCCCACCCCCACGCGCACGCGGCCG
CCGTGGTGGCGGCGTCGGCCTCCGCGCCGCCGGGGCCGAGCAAGAAGCGCTTCCGGACCA
AGTTCACGGCGGAGCAGAAGGAGCGGATGCGTGAATTCGCGCACCGCGTCGGGTGGCGCA
TCCACAAGCCCGACGCCGCCGCCGTCGACGCGTTCTGCGCCCAGGTCGGCGTCTCCCGCC
GCGTCCTCAAGGTGTGGATGCACAACAACAAACACCTCGCCAAGACGCCCCCGTCGCCGA
CATCGCAGCCGCCGCCGCCGCCGCTCCACCACGATCCTTCTCCTCCTCCCCCTCCTCACC
ACCACCACCACCACCATCACCACCACCACCCACCACAACACCATCAGCAGCAGCAGCAGC
AGCATGATGCATGAGAGAGTGAGCGAGTAGAACAATGCAGAGAGGATGATGCATTAGCAT
TAGCTATTAATTAGCTCTCCTTTAGCTTTTCTTCTCCTGTGTAATTCTTCCAAGACTGCA
GTAACCCTCCCTGTTGTTAAGTTTAACTCATGCAGCAGCATCAGTTACTTAGGAGAGTAG
ATGCATT