Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0705600-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:29135051:29141431:-1 gene:Os02g0705600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 29, U-box protein 29 description:Armadillo-like helical domain containing protein. (Os02t0705600-01);Armadillo-like helical domain containing protein. (Os02t0705600-02);Armadillo-like helical domain containing protein. (Os02t0705600-03)
Sequence	ATGGAGAATAGGAACAAAGAAGATATGGGTCCATCCCAGCGTAATTCTTGCCCTAAGGTT CACAGCTCAATGTGCAGTGAGCTGACAATGATGTTAGATAAAGTCTCCTCTATTCTTCCA TTAATTGAGGCAGCTCGACCAGGATGTAAAGCAGGTATACAGGAATTATGCAACCTATAC AATATAGTTGAGAAAGGGAAACTCATAATTCAGCACTGCGTTGAATGTAGCAAGCTCTAC TTGGCTATTACTGGAGAGGCGATTGTATCTCGGTGTGAAAGGATCAGAGACTCACTTAGG CGGAGCTTGTTCCTGATTGAGAACATGGTCCCACCAGCACTAGCTAATCAGATTGTTGAC GTCCATGATGATCTTGGGGACATAAAATTTGTTATTGATCCCACAGAAGAAGAGGCTGGC AAAACCATTTTAGAGATGCTTCGGCAATCTGATGTGACTGAAGAACTTGAACTTGAGACA TTCCTGCAGGCAGCTTCAAACTTAAACCTGACATCTCCTAAATCTATGCTAATTGAACGA AGGGCTATCAAGAAACTGCTTGACAAGATTAGCGGTACTGATCCCAAAAAGGAGGGAGTT CTTAAGTTCCTTCTATACCTTGTTAAAAAGTATGGAAAAAACATCAAACCAGAAACTGGT GAGCGGAATGAAAACATGCAATCTGAAAGCCAGTCTTCGACTCCAAGCTCAAGTTTTGTT AGTGATACCAGCACTCCTGGAAAGTGGTACACACCCACAGACATCCAGAGGAATGAGGAT CAGACTAGTATGTCAGGAGCAGCCACACCACCTGCAGAGTTCTGTTGCCCAATATCAACA AAGTTAATGCGTGATCCTGTCATAATAACATCTGGGCAGACTTATGAAAGAGAAAATATT GAGAGATGGTTTAGGGAGGGATATGATACCTGTCCCAGGACACATATAAAGCTAGAAAAT TTCGCGATGATTCCAAATACTTGCATGAGGGACCTCATTTTCAATTGGTGCAAAGAGCAT GGTTTCATAATCTCAGATATTCTCCCTCCATCCAAAAATGCATACAGTTACTTGCCGGAG CAATTGCATGGTTACTCCATGTCAAGTCTGCACAATGTTTCAGTACCTCTAATTGCTGGA AAAGTCAGGGATTTTGTGATTGACCATAGCACTTCATCTGTTGCATTATCTGAGGCCAGT TATATGTCAGATTCATATCATGTGCGGGACATGGAGGAACCGAAAGATAGTTTTTCTCAG TTCTCTTGGAGTGCGGACTATCAAGAGTGTTTGTCTTTTCGCAACTTCAACCAGGACAAG TTCCTAAGGTTCTTTTACGAGCTGTCGAAGCTCCCATTGGAACTCCAAGACAGGTCCATT GGTGATTTGAAGATCATTCTCAATGAGGAAAATGAGGCTTCATGTGCTATGGTTTCCAAT GGATTTGTAGAGGCATTCTTTGATTTCTTAATGAATGAAGATGGAAGCTACAGTATGCAA GCTCAGAAAGTTGGATTTCAGTTCTTTCGTGTTTTTCTTTCCAATAGCAGGACTAATATT CTACACATGAATGAAGAAGCATTCCGTCTATTTGCATCCTTTATTGATTCTGAGTTAAAA ACCGAAGCTTTGCTGACACTTCACGAGCTGGTTCAACACCTGAGTTGTCGACAATCCCAT TTGATGGCCTCTATTATCACTCCTTTATTGGAGTCTGAAGATGCCGAGGGTCTCAAGCTT TGCCTGAAGATTGTCTGCAATCTTTCATCTGATTCGGATGTAAAACCATACCTAATTTCA CTGGGAATTGTCTCAAGATTGTCACCCATTCTTTCTGAAGGAACCTTTGCTGAGTGTTGC TTGGAGATTTTGCGGAACCTGTGTGATGTGGAAGAAGCCACAGTGCTTATTACAAAAACT GATCGATGCCTTGGTTCCGTTGCAGAATATCTGGACACTGGAAGCCCTAAAGAACGAGAG CATGCAGTGGTTATCCTTTTAGCAGTATGTTCCCATAGTTCTGAGGATTGTTTACTTGTA ATGAAGGAAGGTGTAATCCCTGCCCTTGTGGACTTGTCAGTAAATGGAATTGATGAAGCA AAAGGTTGTTCAATGAAGCTACTTCATCTTCTCAGGGATCTGAGGCGAACCGACCAGTTG AACAACTCATGTTCACAAGAAGTGGTTGTCACAGATGTAGTGGAGGGTCCTCCTGACAGT TCAATTCACAAGCAGCCAATACCAAAGTCATCTCGTTTTTTCCAAAGAAAGTTGAACATT TTCTCAAAGCCCCGGTCACTTACGCTATTCTGA

Peptide Sequence

PEP ID	Os02t0705600-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:29135051:29141431:-1 gene:Os02g0705600 transcript:Os02t0705600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 29, U-box protein 29 description:Armadillo-like helical domain containing protein. (Os02t0705600-01);Armadillo-like helical domain containing protein. (Os02t0705600-02);Armadillo-like helical domain containing protein. (Os02t0705600-03)
Sequence	MENRNKEDMGPSQRNSCPKVHSSMCSELTMMLDKVSSILPLIEAARPGCKAGIQELCNLY NIVEKGKLIIQHCVECSKLYLAITGEAIVSRCERIRDSLRRSLFLIENMVPPALANQIVD VHDDLGDIKFVIDPTEEEAGKTILEMLRQSDVTEELELETFLQAASNLNLTSPKSMLIER RAIKKLLDKISGTDPKKEGVLKFLLYLVKKYGKNIKPETGERNENMQSESQSSTPSSSFV SDTSTPGKWYTPTDIQRNEDQTSMSGAATPPAEFCCPISTKLMRDPVIITSGQTYERENI ERWFREGYDTCPRTHIKLENFAMIPNTCMRDLIFNWCKEHGFIISDILPPSKNAYSYLPE QLHGYSMSSLHNVSVPLIAGKVRDFVIDHSTSSVALSEASYMSDSYHVRDMEEPKDSFSQ FSWSADYQECLSFRNFNQDKFLRFFYELSKLPLELQDRSIGDLKIILNEENEASCAMVSN GFVEAFFDFLMNEDGSYSMQAQKVGFQFFRVFLSNSRTNILHMNEEAFRLFASFIDSELK TEALLTLHELVQHLSCRQSHLMASIITPLLESEDAEGLKLCLKIVCNLSSDSDVKPYLIS LGIVSRLSPILSEGTFAECCLEILRNLCDVEEATVLITKTDRCLGSVAEYLDTGSPKERE HAVVILLAVCSHSSEDCLLVMKEGVIPALVDLSVNGIDEAKGCSMKLLHLLRDLRRTDQL NNSCSQEVVVTDVVEGPPDSSIHKQPIPKSSRFFQRKLNIFSKPRSLTLF

Transcript Sequence

Transcript ID	Os02t0705600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:29135051:29141431:-1 gene:Os02g0705600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 29, U-box protein 29 description:Armadillo-like helical domain containing protein. (Os02t0705600-01);Armadillo-like helical domain containing protein. (Os02t0705600-02);Armadillo-like helical domain containing protein. (Os02t0705600-03)
Sequence	TCTGCGGCCGCGCCATCTCTATCCGGGCTCAAGGGTGTGGCCGGGGGGCGACGAACGCCG CTCTCTCTGCCTTCCTCCTTGACCGATCGCTCCCTTCTGACCGCCTTAATATTCTGGAAA GATCGGTTCTTGCCTTCTTGGGCTGCTTCAGGGGCGTGGGAGAGGTTTGGGGTTGGTTCA TCTCGCGGGCTTGGGCGGCGGGAGGAGGAGAGGGGTTTTGCTTTGTCTCCTGTTCCGACT CTCCGGTTGATTCCTCCGACTGAGTTCAGGGGGAGTTCTTCAATCAGGAAGGTCTTGACT CTCGACGAGGAGTTCAAGGTTCTTGGATTAAAGATTGGCAGTCATTCATCGTGGATGGAG AATAGGAACAAAGAAGATATGGGTCCATCCCAGCGTAATTCTTGCCCTAAGGTTCACAGC TCAATGTGCAGTGAGCTGACAATGATGTTAGATAAAGTCTCCTCTATTCTTCCATTAATT GAGGCAGCTCGACCAGGATGTAAAGCAGGTATACAGGAATTATGCAACCTATACAATATA GTTGAGAAAGGGAAACTCATAATTCAGCACTGCGTTGAATGTAGCAAGCTCTACTTGGCT ATTACTGGAGAGGCGATTGTATCTCGGTGTGAAAGGATCAGAGACTCACTTAGGCGGAGC TTGTTCCTGATTGAGAACATGGTCCCACCAGCACTAGCTAATCAGATTGTTGACGTCCAT GATGATCTTGGGGACATAAAATTTGTTATTGATCCCACAGAAGAAGAGGCTGGCAAAACC ATTTTAGAGATGCTTCGGCAATCTGATGTGACTGAAGAACTTGAACTTGAGACATTCCTG CAGGCAGCTTCAAACTTAAACCTGACATCTCCTAAATCTATGCTAATTGAACGAAGGGCT ATCAAGAAACTGCTTGACAAGATTAGCGGTACTGATCCCAAAAAGGAGGGAGTTCTTAAG TTCCTTCTATACCTTGTTAAAAAGTATGGAAAAAACATCAAACCAGAAACTGGTGAGCGG AATGAAAACATGCAATCTGAAAGCCAGTCTTCGACTCCAAGCTCAAGTTTTGTTAGTGAT ACCAGCACTCCTGGAAAGTGGTACACACCCACAGACATCCAGAGGAATGAGGATCAGACT AGTATGTCAGGAGCAGCCACACCACCTGCAGAGTTCTGTTGCCCAATATCAACAAAGTTA ATGCGTGATCCTGTCATAATAACATCTGGGCAGACTTATGAAAGAGAAAATATTGAGAGA TGGTTTAGGGAGGGATATGATACCTGTCCCAGGACACATATAAAGCTAGAAAATTTCGCG ATGATTCCAAATACTTGCATGAGGGACCTCATTTTCAATTGGTGCAAAGAGCATGGTTTC ATAATCTCAGATATTCTCCCTCCATCCAAAAATGCATACAGTTACTTGCCGGAGCAATTG CATGGTTACTCCATGTCAAGTCTGCACAATGTTTCAGTACCTCTAATTGCTGGAAAAGTC AGGGATTTTGTGATTGACCATAGCACTTCATCTGTTGCATTATCTGAGGCCAGTTATATG TCAGATTCATATCATGTGCGGGACATGGAGGAACCGAAAGATAGTTTTTCTCAGTTCTCT TGGAGTGCGGACTATCAAGAGTGTTTGTCTTTTCGCAACTTCAACCAGGACAAGTTCCTA AGGTTCTTTTACGAGCTGTCGAAGCTCCCATTGGAACTCCAAGACAGGTCCATTGGTGAT TTGAAGATCATTCTCAATGAGGAAAATGAGGCTTCATGTGCTATGGTTTCCAATGGATTT GTAGAGGCATTCTTTGATTTCTTAATGAATGAAGATGGAAGCTACAGTATGCAAGCTCAG AAAGTTGGATTTCAGTTCTTTCGTGTTTTTCTTTCCAATAGCAGGACTAATATTCTACAC ATGAATGAAGAAGCATTCCGTCTATTTGCATCCTTTATTGATTCTGAGTTAAAAACCGAA GCTTTGCTGACACTTCACGAGCTGGTTCAACACCTGAGTTGTCGACAATCCCATTTGATG GCCTCTATTATCACTCCTTTATTGGAGTCTGAAGATGCCGAGGGTCTCAAGCTTTGCCTG AAGATTGTCTGCAATCTTTCATCTGATTCGGATGTAAAACCATACCTAATTTCACTGGGA ATTGTCTCAAGATTGTCACCCATTCTTTCTGAAGGAACCTTTGCTGAGTGTTGCTTGGAG ATTTTGCGGAACCTGTGTGATGTGGAAGAAGCCACAGTGCTTATTACAAAAACTGATCGA TGCCTTGGTTCCGTTGCAGAATATCTGGACACTGGAAGCCCTAAAGAACGAGAGCATGCA GTGGTTATCCTTTTAGCAGTATGTTCCCATAGTTCTGAGGATTGTTTACTTGTAATGAAG GAAGGTGTAATCCCTGCCCTTGTGGACTTGTCAGTAAATGGAATTGATGAAGCAAAAGGT TGTTCAATGAAGCTACTTCATCTTCTCAGGGATCTGAGGCGAACCGACCAGTTGAACAAC TCATGTTCACAAGAAGTGGTTGTCACAGATGTAGTGGAGGGTCCTCCTGACAGTTCAATT CACAAGCAGCCAATACCAAAGTCATCTCGTTTTTTCCAAAGAAAGTTGAACATTTTCTCA AAGCCCCGGTCACTTACGCTATTCTGAAAACTGCGCCAGGATGATTCAAGGTGGTGCCGG CTCCTATCCCGTTGGATCCTTACGGAGAGAGGGGAGGAGGAAGAAGGAGAGGAAAAGAAA TAGGGGGCGTTGAGGAAGAGAAGGATCCTTATGGAGCTTATGGAGAGAAGTAGGGGCACC GAGGAAGAAGAAGGTGAGCCTCCCTTTCATATTAATCCTGTAAATGACGGTTATCTAAAT ATAATCTTTTTCCATGTTATATCAAGGATATACAAACAACCC