Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0704500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:29069440:29072094:1 gene:Os02g0704500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidic acid phosphatase type 2/haloperoxidase domain containing protein. (Os02t0704500-01)
Sequence

ATGCTCTTGTCTCCTCCAGCTCCACCGCCGCTGAAGCCGCCCGTCCGCCTGAATCGACTC
CCGCAGCGGCAGCCGGGAGGCGGCGGCCGGTTCTTGCTGCCCCGGAGGAGGCCAAGAACG
CCGCGGTCCTTTGGCGTGGTGGTGTGCATGGCGGAGATGGCCAGGGTTGGGACCGGGTCC
TCGTGGGAGGAGGAGTTGGGCGTCCCGGAGGAGAGCGACGCGATCCTGGGAGGCGGAGGC
GGGGACGGGCAAAGGCGGCAGGCGACCAGGTGGGAGCTCGTCGAGGCGAGACTGAACCAG
ACGAGTAAATGGCTGGTCGCGGGTTGTTATACTTCTGCAGCCATTTGGAAGCATGATGCT
CTTATTATGTGGGCTATGATTGGTGCTGTTCTAAACTCTATGTTTTCAAATCTTCTTAAA
CGGATATTCAACCATGAAAGGCCTGTGTCTGCTTTGCGGTCTGATCCTGGAATGCCTTCA
TCCCACGCGCAATCTTTTCTCTATTCTGCGGTGTTTCTAATTCTTTCATTGTTCTACTGG
CTCGGGAGAACTTATCTGTCAGTTATTCTTGGGGTTGCAATTCTAGCAATGTGCTGCTAT
CTTTCGTGGTTACGAGTGTCGCAGCACCTCCATACACTGAACCAGGTTCTTGTGGGTGCT
ATAGTAGGATCAGCCTTTGGTGCTATGTGGTTTGCGCTTTTTAATTTGCTCGTGCAAGAG
GCGTTTGCTTCTTCCGTACCGGTTCAGATTGCGGTGACTATCGGGACGGCAATATTATGC
ATCGGCTTTGTCATCCATGTCGTTCGCCACTGGTTCAAGGATGAGTGA

Peptide Sequence

PEP ID

Os02t0704500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:29069440:29072094:1 gene:Os02g0704500 transcript:Os02t0704500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidic acid phosphatase type 2/haloperoxidase domain containing protein. (Os02t0704500-01)
Sequence

MLLSPPAPPPLKPPVRLNRLPQRQPGGGGRFLLPRRRPRTPRSFGVVVCMAEMARVGTGS
SWEEELGVPEESDAILGGGGGDGQRRQATRWELVEARLNQTSKWLVAGCYTSAAIWKHDA
LIMWAMIGAVLNSMFSNLLKRIFNHERPVSALRSDPGMPSSHAQSFLYSAVFLILSLFYW
LGRTYLSVILGVAILAMCCYLSWLRVSQHLHTLNQVLVGAIVGSAFGAMWFALFNLLVQE
AFASSVPVQIAVTIGTAILCIGFVIHVVRHWFKDE

Transcript Sequence

Transcript ID

Os02t0704500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:29069440:29072094:1 gene:Os02g0704500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidic acid phosphatase type 2/haloperoxidase domain containing protein. (Os02t0704500-01)
Sequence

AAGTGCTCAAGCACCAACCCCAAATCCCCTCTCCCCCCCAATCCTCAAAGATGCCGTCCT
CCTCCTCCTACTCCTCCTCCGTTAGCAACCCTGGTCCCGAGCTACCTAGGTCAGCGCGCC
AAGAACCATGCTCTTGTCTCCTCCAGCTCCACCGCCGCTGAAGCCGCCCGTCCGCCTGAA
TCGACTCCCGCAGCGGCAGCCGGGAGGCGGCGGCCGGTTCTTGCTGCCCCGGAGGAGGCC
AAGAACGCCGCGGTCCTTTGGCGTGGTGGTGTGCATGGCGGAGATGGCCAGGGTTGGGAC
CGGGTCCTCGTGGGAGGAGGAGTTGGGCGTCCCGGAGGAGAGCGACGCGATCCTGGGAGG
CGGAGGCGGGGACGGGCAAAGGCGGCAGGCGACCAGGTGGGAGCTCGTCGAGGCGAGACT
GAACCAGACGAGTAAATGGCTGGTCGCGGGTTGTTATACTTCTGCAGCCATTTGGAAGCA
TGATGCTCTTATTATGTGGGCTATGATTGGTGCTGTTCTAAACTCTATGTTTTCAAATCT
TCTTAAACGGATATTCAACCATGAAAGGCCTGTGTCTGCTTTGCGGTCTGATCCTGGAAT
GCCTTCATCCCACGCGCAATCTTTTCTCTATTCTGCGGTGTTTCTAATTCTTTCATTGTT
CTACTGGCTCGGGAGAACTTATCTGTCAGTTATTCTTGGGGTTGCAATTCTAGCAATGTG
CTGCTATCTTTCGTGGTTACGAGTGTCGCAGCACCTCCATACACTGAACCAGGTTCTTGT
GGGTGCTATAGTAGGATCAGCCTTTGGTGCTATGTGGTTTGCGCTTTTTAATTTGCTCGT
GCAAGAGGCGTTTGCTTCTTCCGTACCGGTTCAGATTGCGGTGACTATCGGGACGGCAAT
ATTATGCATCGGCTTTGTCATCCATGTCGTTCGCCACTGGTTCAAGGATGAGTGAATAGC
AATATGAAATCGCAATGACCAATAGGTGATTGATTGAGACACAAAATCAACTGGTAACGG
AAGGCTCTGTATACTCTATGGGAAGATCATACTGGAATTATTTGGGAGTGGGTTCGCAAG
ATAGTCACAGATAGCAACCTCAGTTCATTTTTTGGCATTTTTGCTGCAGGATAGTCACAG
CACTGATTCTTGTAATACAGAACAGTTTATGCTTGAAATTTCTTCCACG