Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0703600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28995717:28998452:1 gene:Os02g0703600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABA-8'-HYDROXYLASE 1 description:Similar to Abscisic acid 8'-hydroxylase 1. (Os02t0703600-01)
Sequence

ATGGGTGCTTTTCTTCTGTTCGTGTGCGTGCTCGCGCCTTTCTTGCTTGTCTGCGCCGTC
CGCGGCCGCCGCCGGCAGGCGGGCTCGTCGGAAGCGGCGGCGTGCGGCCTGCCGCTGCCG
CCGGGGTCGATGGGGTGGCCGTACGTCGGGGAGACGTTCCAGCTGTACTCGTCCAAGAAC
CCCAACGTGTTCTTCAACAAGAAGCGGAACAAGTACGGTCCCATCTTCAAGACGCACATC
CTGGGATGCCCCTGCGTGATGGTGTCCAGCCCGGAGGCGGCGCGGTTCGTGCTGGTGACG
CAGGCGCACCTCTTCAAGCCCACCTTCCCGGCGAGCAAGGAGCGGATGCTGGGTCCCCAG
GCCATCTTCTTCCAGCAGGGCGACTACCACGCCCACCTCCGCCGCATCGTCTCCCGCGCC
TTCTCCCCCGAGTCCATCCGCGCCTCCGTCCCGGCCATCGAGGCCATCGCGCTCCGCTCC
CTCCACTCCTGGGACGGCCAGTTCGTCAACACCTTCCAAGAGATGAAGACTTACGCGCTG
AATGTGGCATTGCTGTCCATCTTCGGGGAGGAGGAGATGCGCTACATCGAGGAGCTGAAG
CAGTGCTACCTGACGCTGGAGAAGGGGTACAACTCGATGCCGGTGAACCTGCCGGGCACC
CTGTTCCACAAGGCCATGAAGGCCCGGAAGAGGCTGGGCGCCATTGTGGCCCACATCATC
TCTGCCCGGCGCGAGCGGCAGCGGGGGAACGACCTGCTAGGGTCGTTCGTGGACGGCCGC
GAGGCCCTCACCGACGCCCAGATCGCCGACAACGTCATCGGCGTCATCTTCGCCGCCCGC
GACACCACCGCCAGCGTCCTCACCTGGATGGTCAAGTTCCTCGGCGACCACCCCGCCGTC
CTCAAGGCCGTCACCGAAGAGCAGCTGCAGATTGCCAAGGAGAAAGAGGCGTCGGGCGAG
CCGCTGTCATGGGCGGACACGCGGCGGATGAAGATGACGAGCCGGGTCATCCAGGAGACG
ATGAGGGTGGCGTCCATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATAC
CAAGGGTACCTGATCCCCAAGGGCTGGAAAGTGCTACCTCTGTTCCGCAACATCCACCAC
AACCCCGACCACTTCCCCTGCCCGGAAAAGTTCGACCCGTCCCGGTTCGAGGTCAGCATC
ACGAACCCACTCTTCCGTGTTTTTGTTCCCTTCCCTCCCTTTCCTTTCCCGGTGCGGCCG
ACTTCCTAG

Peptide Sequence

PEP ID

Os02t0703600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28995717:28998452:1 gene:Os02g0703600 transcript:Os02t0703600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABA-8'-HYDROXYLASE 1 description:Similar to Abscisic acid 8'-hydroxylase 1. (Os02t0703600-01)
Sequence

MGAFLLFVCVLAPFLLVCAVRGRRRQAGSSEAAACGLPLPPGSMGWPYVGETFQLYSSKN
PNVFFNKKRNKYGPIFKTHILGCPCVMVSSPEAARFVLVTQAHLFKPTFPASKERMLGPQ
AIFFQQGDYHAHLRRIVSRAFSPESIRASVPAIEAIALRSLHSWDGQFVNTFQEMKTYAL
NVALLSIFGEEEMRYIEELKQCYLTLEKGYNSMPVNLPGTLFHKAMKARKRLGAIVAHII
SARRERQRGNDLLGSFVDGREALTDAQIADNVIGVIFAARDTTASVLTWMVKFLGDHPAV
LKAVTEEQLQIAKEKEASGEPLSWADTRRMKMTSRVIQETMRVASILSFTFREAVEDVEY
QGYLIPKGWKVLPLFRNIHHNPDHFPCPEKFDPSRFEVSITNPLFRVFVPFPPFPFPVRP
TS

Transcript Sequence

Transcript ID

Os02t0703600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28995717:28998452:1 gene:Os02g0703600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABA-8'-HYDROXYLASE 1 description:Similar to Abscisic acid 8'-hydroxylase 1. (Os02t0703600-01)
Sequence

TCCACACCCCCCCCAACAACACCACCGCCCATTTCCCTTTCTCTTCCTCTTCTTCTTCCT
TCTCCTCCTACTCCTCTGCGATTGACAAAGATAAGTGAAGTGAGCAGGCGCCAATGGGTG
CTTTTCTTCTGTTCGTGTGCGTGCTCGCGCCTTTCTTGCTTGTCTGCGCCGTCCGCGGCC
GCCGCCGGCAGGCGGGCTCGTCGGAAGCGGCGGCGTGCGGCCTGCCGCTGCCGCCGGGGT
CGATGGGGTGGCCGTACGTCGGGGAGACGTTCCAGCTGTACTCGTCCAAGAACCCCAACG
TGTTCTTCAACAAGAAGCGGAACAAGTACGGTCCCATCTTCAAGACGCACATCCTGGGAT
GCCCCTGCGTGATGGTGTCCAGCCCGGAGGCGGCGCGGTTCGTGCTGGTGACGCAGGCGC
ACCTCTTCAAGCCCACCTTCCCGGCGAGCAAGGAGCGGATGCTGGGTCCCCAGGCCATCT
TCTTCCAGCAGGGCGACTACCACGCCCACCTCCGCCGCATCGTCTCCCGCGCCTTCTCCC
CCGAGTCCATCCGCGCCTCCGTCCCGGCCATCGAGGCCATCGCGCTCCGCTCCCTCCACT
CCTGGGACGGCCAGTTCGTCAACACCTTCCAAGAGATGAAGACTTACGCGCTGAATGTGG
CATTGCTGTCCATCTTCGGGGAGGAGGAGATGCGCTACATCGAGGAGCTGAAGCAGTGCT
ACCTGACGCTGGAGAAGGGGTACAACTCGATGCCGGTGAACCTGCCGGGCACCCTGTTCC
ACAAGGCCATGAAGGCCCGGAAGAGGCTGGGCGCCATTGTGGCCCACATCATCTCTGCCC
GGCGCGAGCGGCAGCGGGGGAACGACCTGCTAGGGTCGTTCGTGGACGGCCGCGAGGCCC
TCACCGACGCCCAGATCGCCGACAACGTCATCGGCGTCATCTTCGCCGCCCGCGACACCA
CCGCCAGCGTCCTCACCTGGATGGTCAAGTTCCTCGGCGACCACCCCGCCGTCCTCAAGG
CCGTCACCGAAGAGCAGCTGCAGATTGCCAAGGAGAAAGAGGCGTCGGGCGAGCCGCTGT
CATGGGCGGACACGCGGCGGATGAAGATGACGAGCCGGGTCATCCAGGAGACGATGAGGG
TGGCGTCCATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAGGGT
ACCTGATCCCCAAGGGCTGGAAAGTGCTACCTCTGTTCCGCAACATCCACCACAACCCCG
ACCACTTCCCCTGCCCGGAAAAGTTCGACCCGTCCCGGTTCGAGGTCAGCATCACGAACC
CACTCTTCCGTGTTTTTGTTCCCTTCCCTCCCTTTCCTTTCCCGGTGCGGCCGACTTCCT
AGCCAAGTCGGTCCGCGGTTTGCGAGCAGTGGCCGGTATGGGTTTTCCTGACCCCGCGTC
CGTCCCGTCACTGTTGCAGGTGGCGCCCAAGCCCAACACGTTCATGCCGTTCGGGAACGG
GACCCACTCGTGCCCGGGCAACGAGCTCGCCAAGCTGGAGATGCTCGTGCTCTTCCACCA
CCTCGCAACCAAGTACAGGTGGTCCACGTCCAAGTCCGAGAGCGGCGTCCAGTTCGGCCC
CTTCGCGCTGCCGCTCAACGGCCTCCCCATGAGCTTCACCCGCAAGAACACCGAGCAGGA
GTGAAAACCGAACAGGGAGACAAAAAGAAGAAGAAGAATACTAGCATCAGCTAAGCTGGG
GAAAGCTGGCAAAACCAACATCAACGGCGGGCAGCGGCGCCACGCAGCGCGCGCGAGTCC
ATTTTCGCGGCGGTCACCGTCCGGGGGGACACCTGTTGGCGCCGCAGTGGGAGCGGGAGA
CCGAACGGTGGATTCCGTATTAGCACGGATCATCAGAGTCCTTGTACAGATTCTTCAGCT
AGGACCACGGTTGGCAATCGAGAGGAGGAGCAGAGGAGTTGATGAAAAAAACCAAACACT
ACGTAGACATCTGAGCTAGGGAGCGCCACAAAGAAGTGGCCCTTAATTGTAAAACCAACC
ATTTTTTATCCTTTTTTGCTTAGTTTTTTTTTTGGCCAACAACTATAGGAGAAGAGTAGA
GAAGAGAAGAGAAATTGGGGAGAAAATACAGGGAGGATGAAGAGGCCCTGATTGGGATGT
AAGCTAGGTTGCCCGCCTGAAAGCAGGCTGGCATGCAGATGCAGCTATAGGTCGAATAAT
CGAGGCGAGCGATGATGGACGGATGGATCGATTCATCGATCGCCAGAGTCAAAAGGGAAG
AACGTCGTGATCCCCCGCGGGCTAAGCCAGGCCACGGGAGAGCGACTCCTCTGTACCGTT
TCGTCCAACTCAAGAGAAAATGACCTTCTTG