Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0702000-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:28917800:28920757:1 gene:Os02g0702000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OTP51 description:Similar to predicted protein. (Os02t0702000-00)
Sequence	ATGGCCACCACCTCTCCCTGCGCCGCGCCATCCCCATCGCTACGATGCCCTCTCGCGCTC TCCCACCCCTTCGCCTCTCCTCCTCCTCCTCCCGCCCTCCGTCTCGCCGGCCCGAAGCTT CTCCCCGGCCGCCTCGCCGTGTCCCCGCCTCCTGGAATCCCAGCGGTAGCGTCAGCGCTG GAGTCCCTAATCCTGGATTTGGACGACGACGAGGAGGATGAGGACGAGGAGACCGAGTTT GGGCTGTTCCAGGGAGAGGCGTGGGCGGCGGCCGACGAGAGGGAAGCGGTGAGGTCGCCG GAGCTGGTGGTGCCCGAGCTGGAGGAGCTGCCCGAGCAGTGGCGCCGCTCCAGGATCGCC TGGCTCTGCAAGGAGCTCCCCGCCTACAAGCACTCCACCTTCACCCGCATCCTCAACGCC CAGCGCAAGTGGATCACCCAGGACGACGCCACCTACGTCGCCGTCCATTGCCTCCGCATC CGCAACAACGACGCTGCCTTCCGGGTGTATAGCTGGATGGTACGGCAGCACTGGTTCCGC TTCAACTTTGCACTAGCCACCAGGGTGGCAGATTGCCTTGGGAGGGATGGGAAGGTTGAG AAATGCCGGGAGGTGTTTGAGGCGATGGTCAAGCAGGGCCGTGTGCCTGCAGAGTCTACC TTCCACATACTGATTGTTGCTTACCTCAGTGTACCTAAAGGGCGTTGCCTTGAGGAGGCA TGCACTATCTACAACCAGATGATACAGATGGGTGGTTACAAGCCTCGCCTTAGCCTTCAT AACTCCTTGTTCCGTGCGCTTGTTAGTAAGACAGGGGGAACTGCAAAGTACAATCTCAAG CAGGCTGAGTTTGTGTACCATAATGTGGTCACCACCAATCTTGATGTGCACAAGGATGTC TACGCTGGGCTCATCTGGCTTCACAGCTACCAGGATGTCATTGATAGAGAAAGGATCATA GCTCTTAGGAAGGAGATGAAGCAAGCAGGCTTTGATGAGGGTATTGATGTGCTGGTGTCA GTGATGAGGGCCTTTTCCAAGGAAGGGAATGTTGCAGAAACAGAGGCCACGTGGCACAAT ATTCTTCAGAGTGGTTCTGACCTCCCTGTTCAGGCCTATGTCTGCCGAATGGAGGCTTAT GCCCGGACTGGTGAGCCTATGAAATCTCTCGATATGTTCAAGGAAATGAAGGATAAAAAT ATACCTCCTAATGTTGCATCATATCATAAAATAATTGAGATAATGACAAAAGCTCTGGAA GTAGATATCGTGGAACAACTTATGAATGAATTTATTGAGAGTGATATGAAGCATTTGATG CCAGCCTTCCTTGACTTGATGTACATGTACATGGATCTGGATATGCATGAAAAGTTAGAA TTAACATTCTTAAAATGCATAGCCAGGTGCCGTCCAAACAGAATATTGTACACCATTTAT CTGGAATCACTAGTAAAGGTTGGAAATATCGAGAAGGCTGAGGAGGTATTTGGTGAAATG CACAATAATGGGATGATAGGTACTAACACGAAGTCGTGCAACATTATGCTAAGAGGTTAT CTTTCTGCAGAAGACTATCAGAAAGCCGAAAAGGTTTATGATATGATGAGTAAAAAGAAA TATGATGTACAGGCAGACTCTTTGGAAAAGCTCCAAAGTGGTCTCCTTCTCAACAAGAAA GTTATTAAACCAAAAACTGTGAGCATGAAGCTGGATCAAGAGCAGCGTGAAATTTTAATT GGTTTGCTTCTGGGAGGCACTCGAATGGAATCTTATGCACAGCGAGGGGTCCATATTGTG CACTTTCAGTTCCAGGAAGATTCCAATGCTCATTCAGTTTTAAGGGTGCACATTCATGAG CGTTTCTTTGAATGGTTGTCTTCAGCAAGCAGATCATTCGATGATGGGAGCAAGATACCC TATCAGTTTTCAACAATACCTCACCAGCATTTCAGTTTCTTTGTTGACCAGTTCTTTCTG AAAGGTCAGCCTGTGCTCCCAAAGCTTATCCATAGGTGGTTAACTCCACGTGTTCTAGCA TATTGGTTCATGTTTGGAGGCTCCAAACTCCCATCAGGTGATATTGTTCTTAAGCTCAGT GGTGGGAATAGCGAGGGTGTTGAGAGAATTGTGAACTCCCTGCACACACAGTCGTTAACA AGTAAAGTGAAGAGGAAGGGGAGATTCTTTTGGATAGGTTTTCAGGGTAGCAATGCTGAA TCTTTTTGGAGAATTATAGAGCCTCATGTTTTGAACAATTTTGCGAGTTTAGTAACACAG GAAGGTAGCAGCATAGGCTCTGATGGTACCCAAGATACCGACACTGATTCTGACGATGAT ATGCAAATGTCCGATACAGAAAGAGACGAGTGA

Peptide Sequence

PEP ID	Os02t0702000-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:28917800:28920757:1 gene:Os02g0702000 transcript:Os02t0702000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OTP51 description:Similar to predicted protein. (Os02t0702000-00)
Sequence	MATTSPCAAPSPSLRCPLALSHPFASPPPPPALRLAGPKLLPGRLAVSPPPGIPAVASAL ESLILDLDDDEEDEDEETEFGLFQGEAWAAADEREAVRSPELVVPELEELPEQWRRSRIA WLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFR FNFALATRVADCLGRDGKVEKCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEA CTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDV YAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVAETEATWHN ILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKNIPPNVASYHKIIEIMTKALE VDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIY LESLVKVGNIEKAEEVFGEMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKK YDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIV HFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFVDQFFL KGQPVLPKLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLSGGNSEGVERIVNSLHTQSLT SKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGSSIGSDGTQDTDTDSDDD MQMSDTERDE

Transcript Sequence

Transcript ID	Os02t0702000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:28917800:28920757:1 gene:Os02g0702000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OTP51 description:Similar to predicted protein. (Os02t0702000-00)
Sequence	ATGGCCACCACCTCTCCCTGCGCCGCGCCATCCCCATCGCTACGATGCCCTCTCGCGCTC TCCCACCCCTTCGCCTCTCCTCCTCCTCCTCCCGCCCTCCGTCTCGCCGGCCCGAAGCTT CTCCCCGGCCGCCTCGCCGTGTCCCCGCCTCCTGGAATCCCAGCGGTAGCGTCAGCGCTG GAGTCCCTAATCCTGGATTTGGACGACGACGAGGAGGATGAGGACGAGGAGACCGAGTTT GGGCTGTTCCAGGGAGAGGCGTGGGCGGCGGCCGACGAGAGGGAAGCGGTGAGGTCGCCG GAGCTGGTGGTGCCCGAGCTGGAGGAGCTGCCCGAGCAGTGGCGCCGCTCCAGGATCGCC TGGCTCTGCAAGGAGCTCCCCGCCTACAAGCACTCCACCTTCACCCGCATCCTCAACGCC CAGCGCAAGTGGATCACCCAGGACGACGCCACCTACGTCGCCGTCCATTGCCTCCGCATC CGCAACAACGACGCTGCCTTCCGGGTGTATAGCTGGATGGTACGGCAGCACTGGTTCCGC TTCAACTTTGCACTAGCCACCAGGGTGGCAGATTGCCTTGGGAGGGATGGGAAGGTTGAG AAATGCCGGGAGGTGTTTGAGGCGATGGTCAAGCAGGGCCGTGTGCCTGCAGAGTCTACC TTCCACATACTGATTGTTGCTTACCTCAGTGTACCTAAAGGGCGTTGCCTTGAGGAGGCA TGCACTATCTACAACCAGATGATACAGATGGGTGGTTACAAGCCTCGCCTTAGCCTTCAT AACTCCTTGTTCCGTGCGCTTGTTAGTAAGACAGGGGGAACTGCAAAGTACAATCTCAAG CAGGCTGAGTTTGTGTACCATAATGTGGTCACCACCAATCTTGATGTGCACAAGGATGTC TACGCTGGGCTCATCTGGCTTCACAGCTACCAGGATGTCATTGATAGAGAAAGGATCATA GCTCTTAGGAAGGAGATGAAGCAAGCAGGCTTTGATGAGGGTATTGATGTGCTGGTGTCA GTGATGAGGGCCTTTTCCAAGGAAGGGAATGTTGCAGAAACAGAGGCCACGTGGCACAAT ATTCTTCAGAGTGGTTCTGACCTCCCTGTTCAGGCCTATGTCTGCCGAATGGAGGCTTAT GCCCGGACTGGTGAGCCTATGAAATCTCTCGATATGTTCAAGGAAATGAAGGATAAAAAT ATACCTCCTAATGTTGCATCATATCATAAAATAATTGAGATAATGACAAAAGCTCTGGAA GTAGATATCGTGGAACAACTTATGAATGAATTTATTGAGAGTGATATGAAGCATTTGATG CCAGCCTTCCTTGACTTGATGTACATGTACATGGATCTGGATATGCATGAAAAGTTAGAA TTAACATTCTTAAAATGCATAGCCAGGTGCCGTCCAAACAGAATATTGTACACCATTTAT CTGGAATCACTAGTAAAGGTTGGAAATATCGAGAAGGCTGAGGAGGTATTTGGTGAAATG CACAATAATGGGATGATAGGTACTAACACGAAGTCGTGCAACATTATGCTAAGAGGTTAT CTTTCTGCAGAAGACTATCAGAAAGCCGAAAAGGTTTATGATATGATGAGTAAAAAGAAA TATGATGTACAGGCAGACTCTTTGGAAAAGCTCCAAAGTGGTCTCCTTCTCAACAAGAAA GTTATTAAACCAAAAACTGTGAGCATGAAGCTGGATCAAGAGCAGCGTGAAATTTTAATT GGTTTGCTTCTGGGAGGCACTCGAATGGAATCTTATGCACAGCGAGGGGTCCATATTGTG CACTTTCAGTTCCAGGAAGATTCCAATGCTCATTCAGTTTTAAGGGTGCACATTCATGAG CGTTTCTTTGAATGGTTGTCTTCAGCAAGCAGATCATTCGATGATGGGAGCAAGATACCC TATCAGTTTTCAACAATACCTCACCAGCATTTCAGTTTCTTTGTTGACCAGTTCTTTCTG AAAGGTCAGCCTGTGCTCCCAAAGCTTATCCATAGGTGGTTAACTCCACGTGTTCTAGCA TATTGGTTCATGTTTGGAGGCTCCAAACTCCCATCAGGTGATATTGTTCTTAAGCTCAGT GGTGGGAATAGCGAGGGTGTTGAGAGAATTGTGAACTCCCTGCACACACAGTCGTTAACA AGTAAAGTGAAGAGGAAGGGGAGATTCTTTTGGATAGGTTTTCAGGGTAGCAATGCTGAA TCTTTTTGGAGAATTATAGAGCCTCATGTTTTGAACAATTTTGCGAGTTTAGTAACACAG GAAGGTAGCAGCATAGGCTCTGATGGTACCCAAGATACCGACACTGATTCTGACGATGAT ATGCAAATGTCCGATACAGAAAGAGACGAGTGA