Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0700400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28812685:28814078:-1 gene:Os02g0700400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALTERNATIVE OXIDASE 1C description:Homodimeric diiron-carboxylate protein, Cyanide-resistant respiration in mitochondria, Reactive oxygen species (ROS) scavenging (Os02t0700400-01)
Sequence

ATGGGCTCCCGCGCTGCTGGATCAGTCCTCCTCCGCCACCTCTGCCCCCGAGTCTCCAGC
TCGACCTCTGCGGCTGCGCATGCGCATGCGCAGCGGCCTCCGTTAGCCGGCGCCGGCGGA
GGGGGCGTGGCCTTGTGGGCGCGACTTCTGTCCACCTCCGCCGCCGCGGCGAAGGAGGAG
ACGGCCGCGTCCAAGGAGAACACCGGGAGCACCGCCGCCGCGAAGGCGGAGGCGACGAAG
GCCGCCAAGGAAGGGCCGGCCAGTGCGACTGCGAGTCCCGTGGCGAGCAGCTACTGGGGC
ATCGAGGCGTCGAAGCTCGCGAGCAAGGACGGCGTCGAGTGGAAGTGGTCTTGCTTCAGA
CCATGGGAGACGTACTCGCCGGACACGACGATCGACCTGAAGAAGCACCACGAGCCGAAG
GTGCTGCTCGACAAGGTCGCCTACTGGACCGTCAAGGCGCTGCGCGTGCCCACTGACATC
TTCTTCCAGAGGAGGTACGGGTGCCGCGCGATGATGCTGGAGACGGTGGCGGCGGTGCCG
GGGATGGTGGGCGGCATGCTGCTGCACCTCCGGTCGCTCCGCCGCTTCGAGCACAGCGGC
GGCTGGATCCGCGCGCTGCTGGAGGAGGCCGAGAACGAGCGGATGCACCTCATGACCTTC
ATGGAGGTGGCCAAGCCGAGGTGGTACGAGCGCGCGCTCGTGCTCGCCGTCCAGGGCGTC
TTCTTCAACGCCTACTTCCTCGGCTACCTCCTGTCCCCCAAGCTCGCGCACCGCGTCGTC
GGCTACCTCGAGGAGGAGGCCATCCACTCCTACACCGAGTACCTCAAGGACATCGAGGCC
GGCAAGATCGAGAACGTCCCCGCGCCGCCGATCGCCATCGACTACTGGCGCCTCCCCGCC
GGCGCCACGCTCAAGGACGTCGTCGTCGTCGTCCGCGCCGACGAGGCACACCACCGCGAC
GTCAACCACTTCGCGTCGGATGTTCATTTTCAGGGGATGGATCTCAAGGATATCCCTGCC
CCGCTCGATTATCACTGA

Peptide Sequence

PEP ID

Os02t0700400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28812685:28814078:-1 gene:Os02g0700400 transcript:Os02t0700400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALTERNATIVE OXIDASE 1C description:Homodimeric diiron-carboxylate protein, Cyanide-resistant respiration in mitochondria, Reactive oxygen species (ROS) scavenging (Os02t0700400-01)
Sequence

MGSRAAGSVLLRHLCPRVSSSTSAAAHAHAQRPPLAGAGGGGVALWARLLSTSAAAAKEE
TAASKENTGSTAAAKAEATKAAKEGPASATASPVASSYWGIEASKLASKDGVEWKWSCFR
PWETYSPDTTIDLKKHHEPKVLLDKVAYWTVKALRVPTDIFFQRRYGCRAMMLETVAAVP
GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVLAVQGV
FFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEAGKIENVPAPPIAIDYWRLPA
GATLKDVVVVVRADEAHHRDVNHFASDVHFQGMDLKDIPAPLDYH

Transcript Sequence

Transcript ID

Os02t0700400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28812685:28814078:-1 gene:Os02g0700400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALTERNATIVE OXIDASE 1C description:Homodimeric diiron-carboxylate protein, Cyanide-resistant respiration in mitochondria, Reactive oxygen species (ROS) scavenging (Os02t0700400-01)
Sequence

AAGAGCAGAGCAGCGTCTCCACGATCTCCGGCGATGGGCTCCCGCGCTGCTGGATCAGTC
CTCCTCCGCCACCTCTGCCCCCGAGTCTCCAGCTCGACCTCTGCGGCTGCGCATGCGCAT
GCGCAGCGGCCTCCGTTAGCCGGCGCCGGCGGAGGGGGCGTGGCCTTGTGGGCGCGACTT
CTGTCCACCTCCGCCGCCGCGGCGAAGGAGGAGACGGCCGCGTCCAAGGAGAACACCGGG
AGCACCGCCGCCGCGAAGGCGGAGGCGACGAAGGCCGCCAAGGAAGGGCCGGCCAGTGCG
ACTGCGAGTCCCGTGGCGAGCAGCTACTGGGGCATCGAGGCGTCGAAGCTCGCGAGCAAG
GACGGCGTCGAGTGGAAGTGGTCTTGCTTCAGACCATGGGAGACGTACTCGCCGGACACG
ACGATCGACCTGAAGAAGCACCACGAGCCGAAGGTGCTGCTCGACAAGGTCGCCTACTGG
ACCGTCAAGGCGCTGCGCGTGCCCACTGACATCTTCTTCCAGAGGAGGTACGGGTGCCGC
GCGATGATGCTGGAGACGGTGGCGGCGGTGCCGGGGATGGTGGGCGGCATGCTGCTGCAC
CTCCGGTCGCTCCGCCGCTTCGAGCACAGCGGCGGCTGGATCCGCGCGCTGCTGGAGGAG
GCCGAGAACGAGCGGATGCACCTCATGACCTTCATGGAGGTGGCCAAGCCGAGGTGGTAC
GAGCGCGCGCTCGTGCTCGCCGTCCAGGGCGTCTTCTTCAACGCCTACTTCCTCGGCTAC
CTCCTGTCCCCCAAGCTCGCGCACCGCGTCGTCGGCTACCTCGAGGAGGAGGCCATCCAC
TCCTACACCGAGTACCTCAAGGACATCGAGGCCGGCAAGATCGAGAACGTCCCCGCGCCG
CCGATCGCCATCGACTACTGGCGCCTCCCCGCCGGCGCCACGCTCAAGGACGTCGTCGTC
GTCGTCCGCGCCGACGAGGCACACCACCGCGACGTCAACCACTTCGCGTCGGATGTTCAT
TTTCAGGGGATGGATCTCAAGGATATCCCTGCCCCGCTCGATTATCACTGAAGAAATCTT
ACGGCGGC