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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0699600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28772935:28774108:1 gene:Os02g0699600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L12. (Os02t0699600-01)
Sequence

ATGCCGCCGAAGCTCGACCCGACCCAGGTGGTGGATGTGTTCGTCCGCGTGACCGGCGGT
GAGGTCGGCGCGGCGTCGTCGCTCGCCCCCAAGATCGGGCCGCTCGGTCTCTCCCCGAAG
AAGATCGGAGAGGACATCGCCAAGGAGACCGCCAAGGACTGGAAGGGCCTCCGCGTCACC
GTGAAGCTCACCGTCCAGAACCGGCAGGCCAAGGTCTCCGTCGTCCCCTCCGCCGCGGCG
CTCGTCATCAAGGCGCTCAAGGAGCCCGAGAGGGACCGCAAGAAGGTGAAGAACATCAAG
CACAGCGGCAACATCAGCCTCGACGACGTCATCGAGATCGCGAGGGTCATGAGGCCCAGG
TCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTCGGCACCTGCGTCAGCGTC
GGCTGCACCGTGGACGGCAAGGACCCCAAGGACCTGCAGCAGGAGATCTCCGACGGCGAG
GTCGAGATCCCCTCAGCTTAA

Peptide Sequence

PEP ID

Os02t0699600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28772935:28774108:1 gene:Os02g0699600 transcript:Os02t0699600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L12. (Os02t0699600-01)
Sequence

MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARVMRPR
SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEIPSA

Transcript Sequence

Transcript ID

Os02t0699600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28772935:28774108:1 gene:Os02g0699600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L12. (Os02t0699600-01)
Sequence

ACCTTCCCAAACCCCAGCCACCGCCGCCGCCGCCGCCACCACCGTTGCCGTTGCCGCCTC
CACCACCCGCCCTCGACCACAGCCATGCCGCCGAAGCTCGACCCGACCCAGGTGGTGGAT
GTGTTCGTCCGCGTGACCGGCGGTGAGGTCGGCGCGGCGTCGTCGCTCGCCCCCAAGATC
GGGCCGCTCGGTCTCTCCCCGAAGAAGATCGGAGAGGACATCGCCAAGGAGACCGCCAAG
GACTGGAAGGGCCTCCGCGTCACCGTGAAGCTCACCGTCCAGAACCGGCAGGCCAAGGTC
TCCGTCGTCCCCTCCGCCGCGGCGCTCGTCATCAAGGCGCTCAAGGAGCCCGAGAGGGAC
CGCAAGAAGGTGAAGAACATCAAGCACAGCGGCAACATCAGCCTCGACGACGTCATCGAG
ATCGCGAGGGTCATGAGGCCCAGGTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAG
ATCCTCGGCACCTGCGTCAGCGTCGGCTGCACCGTGGACGGCAAGGACCCCAAGGACCTG
CAGCAGGAGATCTCCGACGGCGAGGTCGAGATCCCCTCAGCTTAAGCAGGTTTGGCATTG
GGGTGGTTGTTATGTGAGGCTGCTGAAGTAGTTTTTCTACCTAGATGGTTCCTGGTGCAG
TGCAGAGAATGGAAGCTTGATCTGTTCTTGTTCTGCTCTTGCTCAAGAAGTAAACTTTTG
TCATGCTTAAAGTGGTACCATGTGAGACTTTTTTTGCCATGCTATATTGTTTACCTTGCG
AAATCAATGTTGTTAATGCAGCTAGATTTATAATATTGAGTTTTCTTTGC