Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0697400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:28677205:28680864:-1 gene:Os02g0697400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 2 description:4-coumarate:coenzyme A ligase, Flavonoid biosynthesis (Os02t0697400-01)
Sequence	ATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCG CCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCAC CTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTC ATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGG GCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTC CAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACC ACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGC GTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTC CCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGAC GACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAG GGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCG GGCACGACGGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTG GCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTG TGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTGCGCGGTGCGC GCCGGCGCGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATC GAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAG AACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCC CCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGA CAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAG GAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAG GTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATC CGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATC GACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTC TTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCC GAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAA AAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGAC ATCACGGAGGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTA CACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGA GAGCTCAGAGCCAAGCTCGCGGCGTGCTGA

Peptide Sequence

PEP ID	Os02t0697400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:28677205:28680864:-1 gene:Os02g0697400 transcript:Os02t0697400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 2 description:4-coumarate:coenzyme A ligase, Flavonoid biosynthesis (Os02t0697400-01)
Sequence	MITVAAPEAQPQVAAAVDEAPPEAVTVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCL IAAATGRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVT TAANPFCTPQEIHKQFKASGVKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDD DEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGV AQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAI ERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFG QGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICI RGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPA ELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRL HKVHFIHAIPKSASGKILRRELRAKLAAC

Transcript Sequence

Transcript ID	Os02t0697400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:28677205:28680864:-1 gene:Os02g0697400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-COUMARATE:COENZYME A LIGASE 2 description:4-coumarate:coenzyme A ligase, Flavonoid biosynthesis (Os02t0697400-01)
Sequence	GTCTCGTCTTCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCT CATCTCGCTCCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTC TTCGTGCCTCGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCAT TAATCCGAGAGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCA CGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGG AGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCC TGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGG CGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCG CGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACT GCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCG CCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGC TCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGA TCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGG CGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCG TCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGA CGGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGC AGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGC TGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTGCGCGGTGCGCGCCGGCG CGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGT GGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGT TCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCG GCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGAT ACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGA CGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCG ACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCC CACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCG AGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCG TCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGG AGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATG ACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATCACGG AGGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGG TGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCA GAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACA TGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTA TTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATAC TGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCAAACTTGGCAACTTT TTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTG GGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATCAT TTGTCAAC