Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0697300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28673054:28676757:1 gene:Os02g0697300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os02t0697300-01)
Sequence

ATGAGTGACAATCTGATGGACAAGGTTAGCGCCTTTGGCGAGCGTCTGAAGATCACTGGG
TCAGAGGTTAGCAAGAAGATGACGGCTGGCATGTCCTCCATGAGCTTCAAGATGAAGGAG
ATCTTCCAGGGGCAGACTCCCGCGGACAAGATTGTGGAGGAGGCCACCTCAGAGAATTTG
GACGGGCCTGATTGGTCGGCAAACCTGGAAATCTGTGACTTGATCAACACGGAGAAAGTT
AACAGTGTCGAGCTGATCCGTGGGATCAAGAAGCGGATCATGCTGAAGGATGCTAGGGTC
CAGTACCTCTCCTTGGTTCTTCTTGAGACCATTGTGAAGAACTGTGAGAAGGCCTTCTCG
GAGGTTGCTGCTGAGAGGGTTCTTGATGAGATGGTCAGGTTGATTGATGATCCTCAGACA
GTGGTAAATAACAGGAACAAAGCCCTTATGCTTATTGAGGCATGGGGAGAGTCTGGTGAT
GAGCTTCGGTACTTGCCTGTCTATGAGGAAACCTACAAGAGCCTGAAATCAAGAGGAGTG
CGGTTCCCTGGGCGTGACAATGAGAGCTTGGCCCCCATATTTACTCCTGCGCGTTCAGTA
GCTGAAGCTGAAGTTGATGCAAACTTTTCCCAGCAGACCTTCGAAGATGTGCAAGTGCAT
ACATATACTGCTGAAGAAACGAAGGAAGCTTTTGATGTGGCTCGTAACAGCATAGAACTT
CTTTCAACTGTTCTTTCATCCTCTCCTCAGCAGGATGCTTTGCAGGATGACTTGACATCC
ACTCTTGTGCAACAATGCTACCAATCTCAGCACACTATCCAGAGAATGATTGAGACTGCT
GGAGACAATGAGGCCATGCTTTTTGAGGCCTTGAGTGTGAATGATGAGATCCAAAAGGTG
CTGTCCAAATATGAACAGATGAAGAAACCCGCAGCGTCTGAGAACGCAGAACAACGGCCG
GTAGTCATACCAATTGCCACAGAACATGAAGATTCTGCTACGGTCGGCAATGAAGATGCC
CTGGTCAGAAAACCAGCTGGTTCTCGAGCAAGGTCAGGTGGAGATGATGATATCCTTGAT
GATCTCGATGAGATGATATTTGGCAAGAAGGGAGGAAGCAGTTCCCAAGAAGGGCCCAAA
AAGCAGGATCCGAAGAAAGATGACCTAATCAGCTTTTAA

Peptide Sequence

PEP ID

Os02t0697300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28673054:28676757:1 gene:Os02g0697300 transcript:Os02t0697300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os02t0697300-01)
Sequence

MSDNLMDKVSAFGERLKITGSEVSKKMTAGMSSMSFKMKEIFQGQTPADKIVEEATSENL
DGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLETIVKNCEKAFS
EVAAERVLDEMVRLIDDPQTVVNNRNKALMLIEAWGESGDELRYLPVYEETYKSLKSRGV
RFPGRDNESLAPIFTPARSVAEAEVDANFSQQTFEDVQVHTYTAEETKEAFDVARNSIEL
LSTVLSSSPQQDALQDDLTSTLVQQCYQSQHTIQRMIETAGDNEAMLFEALSVNDEIQKV
LSKYEQMKKPAASENAEQRPVVIPIATEHEDSATVGNEDALVRKPAGSRARSGGDDDILD
DLDEMIFGKKGGSSSQEGPKKQDPKKDDLISF

Transcript Sequence

Transcript ID

Os02t0697300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28673054:28676757:1 gene:Os02g0697300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS domain containing protein. (Os02t0697300-01)
Sequence

GAACTTCACAAGAACTCCACCGAGAGGAGAGGAGAGGAGAGGAAACGACGACACCTCCTC
CGGCGCGGCGAGACGAATCTACGCGTACCGAGTACCGACGCGGCGACCGCCTCGCTCCGT
CCCTATCCTCGCCGCTCCGGCTGATTCCGTCGCGGAGCGCGCGCGGCCGGCGAGGAGTCC
TGGGAGGGCGACCGACGCAGTCGGCCTCCTTCCATCTCGGTTCGAATCGAATCGAATTGA
AGCCTGCCAGTGAAAATGAGTGACAATCTGATGGACAAGGTTAGCGCCTTTGGCGAGCGT
CTGAAGATCACTGGGTCAGAGGTTAGCAAGAAGATGACGGCTGGCATGTCCTCCATGAGC
TTCAAGATGAAGGAGATCTTCCAGGGGCAGACTCCCGCGGACAAGATTGTGGAGGAGGCC
ACCTCAGAGAATTTGGACGGGCCTGATTGGTCGGCAAACCTGGAAATCTGTGACTTGATC
AACACGGAGAAAGTTAACAGTGTCGAGCTGATCCGTGGGATCAAGAAGCGGATCATGCTG
AAGGATGCTAGGGTCCAGTACCTCTCCTTGGTTCTTCTTGAGACCATTGTGAAGAACTGT
GAGAAGGCCTTCTCGGAGGTTGCTGCTGAGAGGGTTCTTGATGAGATGGTCAGGTTGATT
GATGATCCTCAGACAGTGGTAAATAACAGGAACAAAGCCCTTATGCTTATTGAGGCATGG
GGAGAGTCTGGTGATGAGCTTCGGTACTTGCCTGTCTATGAGGAAACCTACAAGAGCCTG
AAATCAAGAGGAGTGCGGTTCCCTGGGCGTGACAATGAGAGCTTGGCCCCCATATTTACT
CCTGCGCGTTCAGTAGCTGAAGCTGAAGTTGATGCAAACTTTTCCCAGCAGACCTTCGAA
GATGTGCAAGTGCATACATATACTGCTGAAGAAACGAAGGAAGCTTTTGATGTGGCTCGT
AACAGCATAGAACTTCTTTCAACTGTTCTTTCATCCTCTCCTCAGCAGGATGCTTTGCAG
GATGACTTGACATCCACTCTTGTGCAACAATGCTACCAATCTCAGCACACTATCCAGAGA
ATGATTGAGACTGCTGGAGACAATGAGGCCATGCTTTTTGAGGCCTTGAGTGTGAATGAT
GAGATCCAAAAGGTGCTGTCCAAATATGAACAGATGAAGAAACCCGCAGCGTCTGAGAAC
GCAGAACAACGGCCGGTAGTCATACCAATTGCCACAGAACATGAAGATTCTGCTACGGTC
GGCAATGAAGATGCCCTGGTCAGAAAACCAGCTGGTTCTCGAGCAAGGTCAGGTGGAGAT
GATGATATCCTTGATGATCTCGATGAGATGATATTTGGCAAGAAGGGAGGAAGCAGTTCC
CAAGAAGGGCCCAAAAAGCAGGATCCGAAGAAAGATGACCTAATCAGCTTTTAAATACCG
TTCTGGCCAGTTCCTCGTGGAATCAGAAGATGTTTGCTGTTTCATAGTGCCGAACGATAT
CTGTATTCATCCCCGTAGAAGATTTCACATTCGCCAGGATTTGGATCGCTTGTTTATTTG
CATACGATCTATCATACTTGTCTGTCACAGTTTGTTCGGTTGATTTAAGTTGCTTCACCC
TTC