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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0693500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28478690:28481323:-1 gene:Os02g0693500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.17 protein. (Os02t0693500-01)
Sequence

ATGGGGAGGGAGGAGAGGTTCCCGGTGTGGGAGGCGGCACTGCTCGCCGGCGTCGCGGCC
GCCTTTGCCACGGGTCTCGTCGGCGTCTACCTCTCCATGCCTCATTCGGACTACAGCTTC
CTCAAGCTGCCCAAGAACCTCCAGGAGCTCCAAATCCTCACGGATCATCTCGAGGACTAC
ACGAGCGACTACACCGTGCAGGTGCTGGTGGGCTATTGTGCCGTGTACATCTTCATGCAG
ACGTTCATGATCCCAGGAACCATATTCATGTCCCTCCTTGCCGGAGCACTCTTTGGCCAG
CTTGGTGGTGTTGCCCTTGTGGTCTTTGCCGCCACGGCTGGAGCTTCTTCATGCTACTTC
CTGTCTAAGCTGATTGGGAAACCGTTGGTCTTCTCATTGTGGCCGGACAAACTTGGGTTC
TTTCAGAAGCAGGTTGCAAAAAGGAGAGAGAAGCTGTTGAATTACATGCTTTTCCTTAGA
GTAACTCCAACATTGCCCAATACTTTCATCAATTTAGCGTCGCCGATAGTGGATGTGCCC
TACCATATTTTCTTCCTGGCAACCTTTATTGGACTAATCCCAGCTGCCTATGTGACTGTC
AGGGCTGGAATAGCTTTGGGAGACTTGAGCTCATTGAGTGACCTATATGATAAACAATCA
ATAGCACTGTTGTTCTTGATTGGGGTTGTTTCGGTGACACCGACATTGTTGGGCAAGAAC
GAGAAGCAACAAGGCAAAGGGCCAGAAATGGTAGCTAGCAGTAGCTGA

Peptide Sequence

PEP ID

Os02t0693500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28478690:28481323:-1 gene:Os02g0693500 transcript:Os02t0693500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.17 protein. (Os02t0693500-01)
Sequence

MGREERFPVWEAALLAGVAAAFATGLVGVYLSMPHSDYSFLKLPKNLQELQILTDHLEDY
TSDYTVQVLVGYCAVYIFMQTFMIPGTIFMSLLAGALFGQLGGVALVVFAATAGASSCYF
LSKLIGKPLVFSLWPDKLGFFQKQVAKRREKLLNYMLFLRVTPTLPNTFINLASPIVDVP
YHIFFLATFIGLIPAAYVTVRAGIALGDLSSLSDLYDKQSIALLFLIGVVSVTPTLLGKN
EKQQGKGPEMVASSS

Transcript Sequence

Transcript ID

Os02t0693500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28478690:28481323:-1 gene:Os02g0693500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0142I02-OSIGBa0101B20.17 protein. (Os02t0693500-01)
Sequence

GCAGCTCTCCTCTTCTTCTTCCTCCCAAACGGCCAGCGGCGCGCAGCGTCACAGATTTTA
CAGGGGAAAGAGAGGAGGAGATGGGGAGGGAGGAGAGGTTCCCGGTGTGGGAGGCGGCAC
TGCTCGCCGGCGTCGCGGCCGCCTTTGCCACGGGTCTCGTCGGCGTCTACCTCTCCATGC
CTCATTCGGACTACAGCTTCCTCAAGCTGCCCAAGAACCTCCAGGAGCTCCAAATCCTCA
CGGATCATCTCGAGGACTACACGAGCGACTACACCGTGCAGGTGCTGGTGGGCTATTGTG
CCGTGTACATCTTCATGCAGACGTTCATGATCCCAGGAACCATATTCATGTCCCTCCTTG
CCGGAGCACTCTTTGGCCAGCTTGGTGGTGTTGCCCTTGTGGTCTTTGCCGCCACGGCTG
GAGCTTCTTCATGCTACTTCCTGTCTAAGCTGATTGGGAAACCGTTGGTCTTCTCATTGT
GGCCGGACAAACTTGGGTTCTTTCAGAAGCAGGTTGCAAAAAGGAGAGAGAAGCTGTTGA
ATTACATGCTTTTCCTTAGAGTAACTCCAACATTGCCCAATACTTTCATCAATTTAGCGT
CGCCGATAGTGGATGTGCCCTACCATATTTTCTTCCTGGCAACCTTTATTGGACTAATCC
CAGCTGCCTATGTGACTGTCAGGGCTGGAATAGCTTTGGGAGACTTGAGCTCATTGAGTG
ACCTATATGATAAACAATCAATAGCACTGTTGTTCTTGATTGGGGTTGTTTCGGTGACAC
CGACATTGTTGGGCAAGAACGAGAAGCAACAAGGCAAAGGGCCAGAAATGGTAGCTAGCA
GTAGCTGATCACTTGCACGCGAACTCCTTCTCACCTCCCCTTCTGTGTACATATGAAGAT
CCTGCATTTGGTTGCTTCCATGGCCTTTGTTTGGATCGGTGCAACTTATGGCCGGCCAAA
GGGCAACAGAACATGGCAAGGGCCCCTCTTTCTTTCTCCACTTGTGGAACCCTTTGTGCA
TGGTGCTGCGAAAGGGACACCTCACTGTCACAACATTATGATTCTGGGGAACAAGATGGG
CCACCAGAGCTAAAATGACCCATTTGTTCTGTTTAACATCTTGTTTAGATCGAAGGAACA
GCTGATCTTATCATCATTGTATATGCACTGCTAACCAGATTCAGTTTTTC