Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0689900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:28312696:28316195:-1 gene:Os02g0689900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.5A description:TGF-beta receptor, type I/II extracellular region family protein. (Os02t0689900-01)
Sequence	ATGTCTGGCAACGACGGAGACATGAAGATGAGGGTGATCGTCGTGGAAGGCGATGAGACG AGTAACGCCCCGAAGGATGTATGCTGCGAGTACACCCTCGATGGCTCCGTGGATATCAAG GGCTCACCGGCGGTGAAGGGCAAGTCCGGCGGATGGCTCGCCGGCGGCCTTATTCTTCTG AACCAGGGTCTGGCAACCCTGGCGTTCTTCGGGGTAAACGTGAACCTGGTGTTGTTCCTG ACGAGGGTGCTGCAGCAGAGCAACGGCGACGCCGCCAACAACGTGAGCAAATGGACCGGC ACGGTTTACATGTTCTCCCTCATCGGCGCCTTCCTCAGCGACTCCTACTGGGGCCGCTAC AAGACCTGCGCCATATTCCAGGCCATCTTTGTCCTTGGCCTCGCGCTGCTGTCCCTGTCG TCGCGGCTGTACCTGATCAGGCCGGTCGGGTGCGGCACGGAGCACGTGCCCTGCGAGCCG CACTCCGGCGCGGAGCTGGGGATCTTCTACATCGCGCTGTACATGATCGCGTTCGGCAAC GGCGGGTACCAGCCCAACGTCGCCACCTTCGGCGCCGACCAGTTCGACGGCGAGGACCCG GCCGAGTCGCACTCCAAGGTCTCCTTCTTCAGCTACTTCTACCTGGCGCTCAACCTCGGC TCGCTCTTCTCCAACACCTTCCTCAGCTTCCTCGAGGACGAGGGCAACTGGGCGCTCGGC TTCTGGGTCTCCACCGCCGCCGCGGCCACCGCGCTGCTGCTGTTCCTCGGCGGCACGCTC CGCTACCGGTACATCCGCCCCAGCGGCAACCCGGTTGGCAGGATCTTCCAGGTCGCGTTC GCCGCGTGCAGGAACTGGAAGGCCGGCGAGTCGCCGGGCGCCGTGACACTCTACGAGAGC GACGAGAAGGCGGATTCCGGTGGGAGGAAGCTCCTGCACACGGAAGGTTTCAGGTTCTTG GACCGTGCGGCGGTGGTGGGCGCTAACCCGAAGCTTGGCACGTGCACCCAACCGCGTGAC CCCTGGAAGCTGTGCACGGTGACGCAGGTGGAGGAGGTGAAGAGCATCCTGCGGCTCCTC CCCATCTGGCTCTGCACCATCCTCTATTCGGTCGTGTTCACGCAGATGGCGTCGCTGTTC GTCGTGCAGGGCGCCGCGATGCGCCGCACCACCCGGTTCCCGGGCTTCTCCGTCCCGCCC TCCAGCATGTCGGCCTTCGACATCCTCACCGTCGCCACCACCATCTTCCTGTACCGCCGG GCCGTCTGCCCGCTCGTGTCGCGGCTCACGGGCCGCCACACCGGCCCAACCGAGCTGCAG AGGATGGGCCTCGGCCTGGTGCTCGGCGCGATGGCCATGGCCACCGCCGGCACGGTCGAG CACTTCAGGAAGGCCGGCGCCACCACGGCGATGAGCAGCGACCTGCACATCATGTGGCAG GTGCCGCAGTACGCGCTGATCGGCGTGTCGGAGGTGATGATGTACGTCGGCCAGCTCGAG TTCTTCAACGGGGAGATGCCCGACGCGCTCAAGAGCTTCGGGAGCGCGCTCTGCATGATG TCCATGTCGCTCGGCAACTACTTCAGCGACGTCATCGTGAGCGCGGTGACCAAGGCCACC GCCGTGCGCGGCCGCCCCGGCTGGATCCCCGCCGACCTTAACGAGGGCCACCTCGACAAG TTCTTCTTCCTGCTCGCCGTGCTGGCCGTCGCGGACTTCGCCGTGTACCTCGTGTGCGCG AGCCGGTACAGGAGTGGCACGGTGGACGTCGACCGGAGCGACGGGGAGGAGGAGGATGGC GTGGCCGGCAGGCAGATGGCGGCAACGGTGTAA

Peptide Sequence

PEP ID	Os02t0689900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:28312696:28316195:-1 gene:Os02g0689900 transcript:Os02t0689900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.5A description:TGF-beta receptor, type I/II extracellular region family protein. (Os02t0689900-01)
Sequence	MSGNDGDMKMRVIVVEGDETSNAPKDVCCEYTLDGSVDIKGSPAVKGKSGGWLAGGLILL NQGLATLAFFGVNVNLVLFLTRVLQQSNGDAANNVSKWTGTVYMFSLIGAFLSDSYWGRY KTCAIFQAIFVLGLALLSLSSRLYLIRPVGCGTEHVPCEPHSGAELGIFYIALYMIAFGN GGYQPNVATFGADQFDGEDPAESHSKVSFFSYFYLALNLGSLFSNTFLSFLEDEGNWALG FWVSTAAAATALLLFLGGTLRYRYIRPSGNPVGRIFQVAFAACRNWKAGESPGAVTLYES DEKADSGGRKLLHTEGFRFLDRAAVVGANPKLGTCTQPRDPWKLCTVTQVEEVKSILRLL PIWLCTILYSVVFTQMASLFVVQGAAMRRTTRFPGFSVPPSSMSAFDILTVATTIFLYRR AVCPLVSRLTGRHTGPTELQRMGLGLVLGAMAMATAGTVEHFRKAGATTAMSSDLHIMWQ VPQYALIGVSEVMMYVGQLEFFNGEMPDALKSFGSALCMMSMSLGNYFSDVIVSAVTKAT AVRGRPGWIPADLNEGHLDKFFFLLAVLAVADFAVYLVCASRYRSGTVDVDRSDGEEEDG VAGRQMAATV

Transcript Sequence

Transcript ID	Os02t0689900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:28312696:28316195:-1 gene:Os02g0689900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.5A description:TGF-beta receptor, type I/II extracellular region family protein. (Os02t0689900-01)
Sequence	CACTTCCATAGATCCCCTCCTCTTCTTCCTCCTGCTCGGCTTCCTCACACAGAGCTTCTC GTTGCATTAGCCGACGGAGGCCACCGGTGAGGAGAGCCCGAGGAGGAGCAAGAAATGTCT GGCAACGACGGAGACATGAAGATGAGGGTGATCGTCGTGGAAGGCGATGAGACGAGTAAC GCCCCGAAGGATGTATGCTGCGAGTACACCCTCGATGGCTCCGTGGATATCAAGGGCTCA CCGGCGGTGAAGGGCAAGTCCGGCGGATGGCTCGCCGGCGGCCTTATTCTTCTGAACCAG GGTCTGGCAACCCTGGCGTTCTTCGGGGTAAACGTGAACCTGGTGTTGTTCCTGACGAGG GTGCTGCAGCAGAGCAACGGCGACGCCGCCAACAACGTGAGCAAATGGACCGGCACGGTT TACATGTTCTCCCTCATCGGCGCCTTCCTCAGCGACTCCTACTGGGGCCGCTACAAGACC TGCGCCATATTCCAGGCCATCTTTGTCCTTGGCCTCGCGCTGCTGTCCCTGTCGTCGCGG CTGTACCTGATCAGGCCGGTCGGGTGCGGCACGGAGCACGTGCCCTGCGAGCCGCACTCC GGCGCGGAGCTGGGGATCTTCTACATCGCGCTGTACATGATCGCGTTCGGCAACGGCGGG TACCAGCCCAACGTCGCCACCTTCGGCGCCGACCAGTTCGACGGCGAGGACCCGGCCGAG TCGCACTCCAAGGTCTCCTTCTTCAGCTACTTCTACCTGGCGCTCAACCTCGGCTCGCTC TTCTCCAACACCTTCCTCAGCTTCCTCGAGGACGAGGGCAACTGGGCGCTCGGCTTCTGG GTCTCCACCGCCGCCGCGGCCACCGCGCTGCTGCTGTTCCTCGGCGGCACGCTCCGCTAC CGGTACATCCGCCCCAGCGGCAACCCGGTTGGCAGGATCTTCCAGGTCGCGTTCGCCGCG TGCAGGAACTGGAAGGCCGGCGAGTCGCCGGGCGCCGTGACACTCTACGAGAGCGACGAG AAGGCGGATTCCGGTGGGAGGAAGCTCCTGCACACGGAAGGTTTCAGGTTCTTGGACCGT GCGGCGGTGGTGGGCGCTAACCCGAAGCTTGGCACGTGCACCCAACCGCGTGACCCCTGG AAGCTGTGCACGGTGACGCAGGTGGAGGAGGTGAAGAGCATCCTGCGGCTCCTCCCCATC TGGCTCTGCACCATCCTCTATTCGGTCGTGTTCACGCAGATGGCGTCGCTGTTCGTCGTG CAGGGCGCCGCGATGCGCCGCACCACCCGGTTCCCGGGCTTCTCCGTCCCGCCCTCCAGC ATGTCGGCCTTCGACATCCTCACCGTCGCCACCACCATCTTCCTGTACCGCCGGGCCGTC TGCCCGCTCGTGTCGCGGCTCACGGGCCGCCACACCGGCCCAACCGAGCTGCAGAGGATG GGCCTCGGCCTGGTGCTCGGCGCGATGGCCATGGCCACCGCCGGCACGGTCGAGCACTTC AGGAAGGCCGGCGCCACCACGGCGATGAGCAGCGACCTGCACATCATGTGGCAGGTGCCG CAGTACGCGCTGATCGGCGTGTCGGAGGTGATGATGTACGTCGGCCAGCTCGAGTTCTTC AACGGGGAGATGCCCGACGCGCTCAAGAGCTTCGGGAGCGCGCTCTGCATGATGTCCATG TCGCTCGGCAACTACTTCAGCGACGTCATCGTGAGCGCGGTGACCAAGGCCACCGCCGTG CGCGGCCGCCCCGGCTGGATCCCCGCCGACCTTAACGAGGGCCACCTCGACAAGTTCTTC TTCCTGCTCGCCGTGCTGGCCGTCGCGGACTTCGCCGTGTACCTCGTGTGCGCGAGCCGG TACAGGAGTGGCACGGTGGACGTCGACCGGAGCGACGGGGAGGAGGAGGATGGCGTGGCC GGCAGGCAGATGGCGGCAACGGTGTAAGCGTCAGGATGAATCGGCCGTCTGCTCGCGCTC GATAGATGCATGGCAGGCTGTCGTGGTTCTTGAGACGGAGACTGCAGACTCTTCGAGGGG ATGAGTTGCATTGGGACGAGTTGGTTTAGCACGACAAGTCTCCGTTGATGATAGGACATG CACGGGGGGATAGTGACACGATACTAAAGAATAAGAGGTCGCCTACAGATGCAGTATTGT TCTATCATGTACGCCTGTGTTTCATCGTTTCACATTTTTCTGGCCAATGTAACAAGAGAA CGCGACTGTTACTGACC