Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0689800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:28294322:28299880:-1 gene:Os02g0689800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DEAD/DEAH box helicase domain-containing protein PIE1. (Os02t0689800-01)
Sequence	AAGAAGAACCCTTTATGCCACATGGAATTTTCATCAAGCCTAGCAAATCTTGTTCTATCA TCGGTGGATCGCTTCAAGACAATGCTTGATTTTATTGAGTCATTTACTTTTGCAATTCCT GCTGCACGAGCGCCTGCACCATTATTCTGGTGCAACAAAGGGAAATCTCCTGTTCTTATT GAACCAGCATACAGAGAGAAATGCATGAATGAGTTTTCTCCTGTTTTCTCTCCTATAAGG CCTGCGATTGTTCGCCGTCAAGTGTACTTTCCTGACAGGCGTTTGATCCAGTTTGACTGT GGAAAGTTGCAGGAACTTGCTATTTTGTTGAGGCGTTTGAAGTCAGAAGGACACAGGGCC TTGATATTTACTCAGATGACTAAGATGCTTGATATACTGGAGGAGTTCATTAATCTATAT GGGTATACGTATTTGCGGTTAGATGGATCAACCCAGCCAGAAGAGAGGCAGACACTGATG CAGAGGTTTAATACTAACCCAAAGTTTTTTCTTTTTATCTTATCCACTCGTAGTGGTGGT GTGGGAATCAACCTAGTAGGTGCAGACACTGTCATTTTCTATGATAGTGACTGGAATCCT GCAATGGACCAACAGGCCCAAGACAGATGCCACAGGATAGGTCAAACTCGTGAAGTTCAC ATCTATAGACTGATCAGTGAGAGCACTATAGAGGAGAATATACTCAAGAAAGCCAATCAG AAGCGAGCTCTTGATGATCTAGTGATACAACGCGGTAGCTACAATACAGAGTTCTTCAAG AAGCTTGATCCTATGGAATTCTTTTCTGGGCACTCATCACTTCATGCAGAGAATCAGCAG AAGGATTGCTCTCTGTCTGCTGGACCCTCAAACGGAACTAATCTGGCGCTGTCAAATGTT GATGTTGAAGCAGCTATTAGACAGGCAGAAGATGAAGCTGACTATATGGCTCTCAAGAGG CTGGAGCAGGAAGAGGCCGTGGACAATCAAGAGTTCAGCGAGGAGGCTGCTGGAAGACTT GAGGAGGATGATCTTGTAAACGAGGATGACACTAAACCTGATGAACACACCAATGAAGAG CATAAATATCAGTGTTCTGATTTGGTCAAGGACAAGCATGTTGCTTTATCTATAAATCAA TTAGATGAAGAAAAGGCTATAACTTTGGCTGGAGGAGATGGAGATATTGACATGCTTGCT GATGTTAAGCAGATGGCTGCTGCAGCTGCTGCAGCAGGTCAAGCAAGTTCGTCTTTTGAA AATCAGCTCCGGCCAATTGATAGATATGCCATGCGGTTTTTGGAACTCTGGGATCCAATA ATTGATAAAGCTGCTATAAACTATCAGGTCAATGTTGAAGAGGAAGAATGGGAACTTGAA CGCATTGAAAAACTCAAAGAAGATTTAGAAGCAGAAATTGATGAAGACCAGGAACCACTT TCTTATGAGTCATGGGATGTTGATTTTGCTACTACAGCATATCGGCAACATGTTGAGGCT CTAGCTCAAAAACAGTTGTTTGAGGAACAAGAAAGACAAGCCCGTGAAGCAGCAAAAGAG TTGGAGGAAAAGAATGATAATAGCACTCAACGAAAAAAGTCAAAAAAGAACAAGAAGAAG GCAGCGAAGTTCAAATCTTTGAAGAAAGGACGTTTATCATCTGAGTCAGAGGTTATGGTT GAGGAAACATCAGTAGATACTATGAGCATTGATGACAATGCACCCTCACCAGAGCTAATG AGCGATGAATCAGCACACCATCATTCTAACAAGCATAAGAGGATAATGTCAACCAATGAG GAAGAGAACAGCAATAGCAGAAGCCTGAAGAAGCTCAAGAAAGCCCCTAAATCGAGTTTC AGTTCCGAGGCCTTATCACCTAAGCATTTTCTTGAAGGCAAGCAGCTTAAGTTGAAAGAT GAACTTAATGATTCTGATCCCAAATCGGGGGCAAGAATTAAGAGTGATGGCCGAATTTCT GTCCCATGCATGCCAGTAAAGCGTGTCATGGTAATCAAGCCTGAGAGATTGAAGAAGAAG AGCCTATGGTCTCGCGATTGTGCTTCAGACTCGTGGACAACTGAGGAAGATGCTGTTCTT TGTGCAACTGTAAATGAGTACGGCCCTCTTTGGGAACTGGCTAGTGATTCTCTTCATTCT GTACCAGGTGGTGCATTTTATAGAGGAAGATACCGTCACCCTGTGCATTGCTGTGAGAGA TTCCGGGAATTAGTCTGCAAGCACATCTTATCAGCAACAGACAATTCAAACAGTGAGAAG GTTCCTTCTGGGACTGGGAAGGCTATCTTGAAAGTATCTGAGGATCAAACTCAGATGTTG CTCAATGTAATCAGCGAGCTTCCTAACAATGAATTGCTTCTCCAGAAACATTTCATGGCT GTTCTTTCATCTGTTTGGAGATCGAAGTCTGCCTGTGAGTCCCACTGTGTTATGAGTTAC TCTAACACACTCCAGAAACCTGGCAGACTCAGCGAGAACTGGTCCATGACAAACTTCAGA CCAAACTTTAATCTAGTAAGGACAGCCCTCGCAGATGCTCAGGTTCAATGTCCAAGAATG GTAGTTCCAACAAGCAATCATGAGTCCCGCCGTAACTTTTTGGAATTGGAATTGGATTTC TTGACAGATCGAGATGATTATGAGGCGGACTTTCCATCTGTTGTTAACGTGTCCATACTA GAACCGGAACCATTAAAACATGCTGTGGAGCCAGTGGAGCACTCACTACTGTCCACACTT TCTTATAGACATGCTGAGAACAGATTCAGGATGGTATCAGAAACTTGTTTTGAAGGGGAA GGTTCTCACTGGGCCTCATCTGCTTTCCACACATACGATGCCGGTCGGCATAAATCTGGT CCTAAGTCCATAGGAAAGCACAAAGCATCATCAGAATCTGGAAGGCCTCCCAAATCCAAA ATTCAAAGGACCACTGAACCACAGGAAGTGCCGGTTACAAATAATTTTCATAGGATTCCG GGGCAACTTCTGCATAACTCAGCAGAGTTCCACATTACCCAGTCCCTATCTGACCTTGGC ATCAGTGATTCTGAATTCACCTACTTTGATAATCTTCCTCAAGAGGCTGAAACAGAGTTT GTTCCGTACCAGTATGACTCTGATGTCCTTTCTGGCATTGAGGAGTTGGATCCTCTTACA GATTTCACAGACATCGGATGA

Peptide Sequence

PEP ID	Os02t0689800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:28294322:28299880:-1 gene:Os02g0689800 transcript:Os02t0689800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DEAD/DEAH box helicase domain-containing protein PIE1. (Os02t0689800-01)
Sequence	KKNPLCHMEFSSSLANLVLSSVDRFKTMLDFIESFTFAIPAARAPAPLFWCNKGKSPVLI EPAYREKCMNEFSPVFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRA LIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGG VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQ KRALDDLVIQRGSYNTEFFKKLDPMEFFSGHSSLHAENQQKDCSLSAGPSNGTNLALSNV DVEAAIRQAEDEADYMALKRLEQEEAVDNQEFSEEAAGRLEEDDLVNEDDTKPDEHTNEE HKYQCSDLVKDKHVALSINQLDEEKAITLAGGDGDIDMLADVKQMAAAAAAAGQASSSFE NQLRPIDRYAMRFLELWDPIIDKAAINYQVNVEEEEWELERIEKLKEDLEAEIDEDQEPL SYESWDVDFATTAYRQHVEALAQKQLFEEQERQAREAAKELEEKNDNSTQRKKSKKNKKK AAKFKSLKKGRLSSESEVMVEETSVDTMSIDDNAPSPELMSDESAHHHSNKHKRIMSTNE EENSNSRSLKKLKKAPKSSFSSEALSPKHFLEGKQLKLKDELNDSDPKSGARIKSDGRIS VPCMPVKRVMVIKPERLKKKSLWSRDCASDSWTTEEDAVLCATVNEYGPLWELASDSLHS VPGGAFYRGRYRHPVHCCERFRELVCKHILSATDNSNSEKVPSGTGKAILKVSEDQTQML LNVISELPNNELLLQKHFMAVLSSVWRSKSACESHCVMSYSNTLQKPGRLSENWSMTNFR PNFNLVRTALADAQVQCPRMVVPTSNHESRRNFLELELDFLTDRDDYEADFPSVVNVSIL EPEPLKHAVEPVEHSLLSTLSYRHAENRFRMVSETCFEGEGSHWASSAFHTYDAGRHKSG PKSIGKHKASSESGRPPKSKIQRTTEPQEVPVTNNFHRIPGQLLHNSAEFHITQSLSDLG ISDSEFTYFDNLPQEAETEFVPYQYDSDVLSGIEELDPLTDFTDIG

Transcript Sequence

Transcript ID	Os02t0689800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:28294322:28299880:-1 gene:Os02g0689800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DEAD/DEAH box helicase domain-containing protein PIE1. (Os02t0689800-01)
Sequence	AGAAGAAGAACCCTTTATGCCACATGGAATTTTCATCAAGCCTAGCAAATCTTGTTCTAT CATCGGTGGATCGCTTCAAGACAATGCTTGATTTTATTGAGTCATTTACTTTTGCAATTC CTGCTGCACGAGCGCCTGCACCATTATTCTGGTGCAACAAAGGGAAATCTCCTGTTCTTA TTGAACCAGCATACAGAGAGAAATGCATGAATGAGTTTTCTCCTGTTTTCTCTCCTATAA GGCCTGCGATTGTTCGCCGTCAAGTGTACTTTCCTGACAGGCGTTTGATCCAGTTTGACT GTGGAAAGTTGCAGGAACTTGCTATTTTGTTGAGGCGTTTGAAGTCAGAAGGACACAGGG CCTTGATATTTACTCAGATGACTAAGATGCTTGATATACTGGAGGAGTTCATTAATCTAT ATGGGTATACGTATTTGCGGTTAGATGGATCAACCCAGCCAGAAGAGAGGCAGACACTGA TGCAGAGGTTTAATACTAACCCAAAGTTTTTTCTTTTTATCTTATCCACTCGTAGTGGTG GTGTGGGAATCAACCTAGTAGGTGCAGACACTGTCATTTTCTATGATAGTGACTGGAATC CTGCAATGGACCAACAGGCCCAAGACAGATGCCACAGGATAGGTCAAACTCGTGAAGTTC ACATCTATAGACTGATCAGTGAGAGCACTATAGAGGAGAATATACTCAAGAAAGCCAATC AGAAGCGAGCTCTTGATGATCTAGTGATACAACGCGGTAGCTACAATACAGAGTTCTTCA AGAAGCTTGATCCTATGGAATTCTTTTCTGGGCACTCATCACTTCATGCAGAGAATCAGC AGAAGGATTGCTCTCTGTCTGCTGGACCCTCAAACGGAACTAATCTGGCGCTGTCAAATG TTGATGTTGAAGCAGCTATTAGACAGGCAGAAGATGAAGCTGACTATATGGCTCTCAAGA GGCTGGAGCAGGAAGAGGCCGTGGACAATCAAGAGTTCAGCGAGGAGGCTGCTGGAAGAC TTGAGGAGGATGATCTTGTAAACGAGGATGACACTAAACCTGATGAACACACCAATGAAG AGCATAAATATCAGTGTTCTGATTTGGTCAAGGACAAGCATGTTGCTTTATCTATAAATC AATTAGATGAAGAAAAGGCTATAACTTTGGCTGGAGGAGATGGAGATATTGACATGCTTG CTGATGTTAAGCAGATGGCTGCTGCAGCTGCTGCAGCAGGTCAAGCAAGTTCGTCTTTTG AAAATCAGCTCCGGCCAATTGATAGATATGCCATGCGGTTTTTGGAACTCTGGGATCCAA TAATTGATAAAGCTGCTATAAACTATCAGGTCAATGTTGAAGAGGAAGAATGGGAACTTG AACGCATTGAAAAACTCAAAGAAGATTTAGAAGCAGAAATTGATGAAGACCAGGAACCAC TTTCTTATGAGTCATGGGATGTTGATTTTGCTACTACAGCATATCGGCAACATGTTGAGG CTCTAGCTCAAAAACAGTTGTTTGAGGAACAAGAAAGACAAGCCCGTGAAGCAGCAAAAG AGTTGGAGGAAAAGAATGATAATAGCACTCAACGAAAAAAGTCAAAAAAGAACAAGAAGA AGGCAGCGAAGTTCAAATCTTTGAAGAAAGGACGTTTATCATCTGAGTCAGAGGTTATGG TTGAGGAAACATCAGTAGATACTATGAGCATTGATGACAATGCACCCTCACCAGAGCTAA TGAGCGATGAATCAGCACACCATCATTCTAACAAGCATAAGAGGATAATGTCAACCAATG AGGAAGAGAACAGCAATAGCAGAAGCCTGAAGAAGCTCAAGAAAGCCCCTAAATCGAGTT TCAGTTCCGAGGCCTTATCACCTAAGCATTTTCTTGAAGGCAAGCAGCTTAAGTTGAAAG ATGAACTTAATGATTCTGATCCCAAATCGGGGGCAAGAATTAAGAGTGATGGCCGAATTT CTGTCCCATGCATGCCAGTAAAGCGTGTCATGGTAATCAAGCCTGAGAGATTGAAGAAGA AGAGCCTATGGTCTCGCGATTGTGCTTCAGACTCGTGGACAACTGAGGAAGATGCTGTTC TTTGTGCAACTGTAAATGAGTACGGCCCTCTTTGGGAACTGGCTAGTGATTCTCTTCATT CTGTACCAGGTGGTGCATTTTATAGAGGAAGATACCGTCACCCTGTGCATTGCTGTGAGA GATTCCGGGAATTAGTCTGCAAGCACATCTTATCAGCAACAGACAATTCAAACAGTGAGA AGGTTCCTTCTGGGACTGGGAAGGCTATCTTGAAAGTATCTGAGGATCAAACTCAGATGT TGCTCAATGTAATCAGCGAGCTTCCTAACAATGAATTGCTTCTCCAGAAACATTTCATGG CTGTTCTTTCATCTGTTTGGAGATCGAAGTCTGCCTGTGAGTCCCACTGTGTTATGAGTT ACTCTAACACACTCCAGAAACCTGGCAGACTCAGCGAGAACTGGTCCATGACAAACTTCA GACCAAACTTTAATCTAGTAAGGACAGCCCTCGCAGATGCTCAGGTTCAATGTCCAAGAA TGGTAGTTCCAACAAGCAATCATGAGTCCCGCCGTAACTTTTTGGAATTGGAATTGGATT TCTTGACAGATCGAGATGATTATGAGGCGGACTTTCCATCTGTTGTTAACGTGTCCATAC TAGAACCGGAACCATTAAAACATGCTGTGGAGCCAGTGGAGCACTCACTACTGTCCACAC TTTCTTATAGACATGCTGAGAACAGATTCAGGATGGTATCAGAAACTTGTTTTGAAGGGG AAGGTTCTCACTGGGCCTCATCTGCTTTCCACACATACGATGCCGGTCGGCATAAATCTG GTCCTAAGTCCATAGGAAAGCACAAAGCATCATCAGAATCTGGAAGGCCTCCCAAATCCA AAATTCAAAGGACCACTGAACCACAGGAAGTGCCGGTTACAAATAATTTTCATAGGATTC CGGGGCAACTTCTGCATAACTCAGCAGAGTTCCACATTACCCAGTCCCTATCTGACCTTG GCATCAGTGATTCTGAATTCACCTACTTTGATAATCTTCCTCAAGAGGCTGAAACAGAGT TTGTTCCGTACCAGTATGACTCTGATGTCCTTTCTGGCATTGAGGAGTTGGATCCTCTTA CAGATTTCACAGACATCGGATGAGAACAAATGAACATATTGCTCTGGATGTCATGCCCTT TCTTTTAAAGAGGACATTAGATTGTCAACGGTAGGAGCCCAAGGATACACAGATTGAGTC GCTCGCCACACAGAATTGATGCAAGCTTGATGGCGATTGGTGGGAGCGAAGCTATTTGCT TGATGTGGTCACAATGACCTTACAAGCTTGGAGGGTTTGGTTAGCACTAATGGAGGCATT GGGTACTTTCTATACATGTATGTATATTGGTAGCGTAGGCTCTTTAGATGTAGAATTGTA TTCCCTCATTTATGTTGAGGGAAGACTTTGTAACTTGGAAATTTTGTTTAGCAGATGCCA ACAGAGAAGGGAAAAGAGGAAGGCCCTCGGCACCACCC