Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0689000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:28258277:28259364:1 gene:Os02g0689000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0689000-01)
Sequence

ATGAGGCGTCTGCTCGTCCCGGTGCTCCTCCTCATGCTCGGATTGTCTACCTGCGAGTCC
TCCGTGTTGCAGGACACATGCAAGTCCGTCGCCGCCGGCCACAAGTACGTCACCTACAAC
GACTGCATCAAGGCCTTCCAGGCCGACAGCGCCAGCGCCACCGCGGCCGACGCGCGCGGC
CTCGCCGCCATCGCGGCCAGGATCGCGGAGAAGGCCGCCAACGCCACGTCCGCGCGCATC
GCCGCGCTGAGAGCCGCGGAGAAGGACGCGAGGAGGAAGGACCGCCTCGGCGTGTGCGCG
GAGGTGTACTCGGACGCCGTGGACCAGCTCGGGGAGACCGCCGAGGACATCGCCAGGGGC
GGGGACGAGGCCACCCAGGACGCGGTGACGCAGCTCAGCGCGGCGCTGGACGCGCCAGGG
ACGTGCGAGGACGCGTTCGGCGAGGCCGACGACGCGTCGCCGCTGGCCCCGGAGGACGCC
GAGTTCGCGAAGCTGGCGACCATCGCCCTCGCCGTCGCTGCGTCCCTCTCGCCGCCGCCA
TCGACACCGGCAACCATGGATTGA

Peptide Sequence

PEP ID

Os02t0689000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:28258277:28259364:1 gene:Os02g0689000 transcript:Os02t0689000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0689000-01)
Sequence

MRRLLVPVLLLMLGLSTCESSVLQDTCKSVAAGHKYVTYNDCIKAFQADSASATAADARG
LAAIAARIAEKAANATSARIAALRAAEKDARRKDRLGVCAEVYSDAVDQLGETAEDIARG
GDEATQDAVTQLSAALDAPGTCEDAFGEADDASPLAPEDAEFAKLATIALAVAASLSPPP
STPATMD

Transcript Sequence

Transcript ID

Os02t0689000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28258277:28259364:1 gene:Os02g0689000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0689000-01)
Sequence

GATCGAAACCGTCTACACGCAGTCGACGTCTACGCGACAAGCCGCGAGAACGTACGCCGC
CGCCACAACACAATCCCAAGCTCCCAACCTACGCAAGCTCACCATCGCCGGCCGTCGACC
CAATCCCAGCGACCATGAGGCGTCTGCTCGTCCCGGTGCTCCTCCTCATGCTCGGATTGT
CTACCTGCGAGTCCTCCGTGTTGCAGGACACATGCAAGTCCGTCGCCGCCGGCCACAAGT
ACGTCACCTACAACGACTGCATCAAGGCCTTCCAGGCCGACAGCGCCAGCGCCACCGCGG
CCGACGCGCGCGGCCTCGCCGCCATCGCGGCCAGGATCGCGGAGAAGGCCGCCAACGCCA
CGTCCGCGCGCATCGCCGCGCTGAGAGCCGCGGAGAAGGACGCGAGGAGGAAGGACCGCC
TCGGCGTGTGCGCGGAGGTGTACTCGGACGCCGTGGACCAGCTCGGGGAGACCGCCGAGG
ACATCGCCAGGGGCGGGGACGAGGCCACCCAGGACGCGGTGACGCAGCTCAGCGCGGCGC
TGGACGCGCCAGGGACGTGCGAGGACGCGTTCGGCGAGGCCGACGACGCGTCGCCGCTGG
CCCCGGAGGACGCCGAGTTCGCGAAGCTGGCGACCATCGCCCTCGCCGTCGCTGCGTCCC
TCTCGCCGCCGCCATCGACACCGGCAACCATGGATTGATACTGTCTATTAATCATCGTGA
TTCGCGCATAATTAGAAATTTAGCATCGTGGACTACATTCAGCTATAATAAAAGATTTTT
CGATGATATGTTAAATTTTTTATGCTTTACTTGGAAGGATTTTGTCCAGTGCCTTGCATG
TTACGCATGCAACGTGGTTTAGTGGGCGAGTAGCCAGCTTGGAATCTCATCTCGCGCTTT
TTTTATACTCCGTACGTGGTATGTCTTTGAACGTGGGTGCTAGCTGTTTTCTGGAAGTGG
GAGCGTTGAGTGGAAGCAAGGCGTGCTGCCTTCTGAACAGCACTTTTGCCTTTCGCCTTC
GCTCCCTTCTTTTCTATGTGGCTTGTTGGCATATATTGCTACAAAATTGTACTGGTAAAT
ATACAGAT