Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0686100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:28096979:28098029:-1 gene:Os02g0686100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os02t0686100-00)
Sequence

ATGGCGAGAATGCTCCTTGAGGCGGCCGCCTCCGGCTCGGTGGAGGACTCACTCAACTCG
GACCTCGTCGTCATCCTCGCCGGGCTGCTCTGCGCGCTCATCTGCGTCCTCGGCCTCGGC
CTCGTCGCCCGGTGCGCGTGCACGCGCCGCTGGGCGCGGGCCGCCGGCGGCGGGACAGCG
GCTGGCGGCGGCGGCGGTGGCGCCGCCGCGGCGAACAAGGGCGTCAAGAAGGAGGTGCTG
CGGTCGCTCCCGACCGTGACGTACGTCTCCGACGGCGGCGGCGGCGAGGCGGAGGAGTGC
GCCATCTGCCTCGTGGAGTTCGAGGACGGGCAGGCCGTGCGCGTGCTGCCGCAGTGCGAC
CACCGCTTCCACGCCGCCTGCATCGACACGTGGCTGCGCGCGCACTCGTCGTGCCCGTCG
TGCCGCCGCGTGCTCGTCGCCGCCGAGATGCCCCCCGGCGAGCGGTGCGGCCGCTGCGGC
GCGCGCTCCGGCGGCCGCGGCATCGGCGCGCTGCTCTTGAATTACTGGAAGGCGCCGGCC
TGCGACGCCGAGGGGCCAGAGTTGGCGTAG

Peptide Sequence

PEP ID

Os02t0686100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:28096979:28098029:-1 gene:Os02g0686100 transcript:Os02t0686100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os02t0686100-00)
Sequence

MARMLLEAAASGSVEDSLNSDLVVILAGLLCALICVLGLGLVARCACTRRWARAAGGGTA
AGGGGGGAAAANKGVKKEVLRSLPTVTYVSDGGGGEAEECAICLVEFEDGQAVRVLPQCD
HRFHAACIDTWLRAHSSCPSCRRVLVAAEMPPGERCGRCGARSGGRGIGALLLNYWKAPA
CDAEGPELA

Transcript Sequence

Transcript ID

Os02t0686100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28096979:28098029:-1 gene:Os02g0686100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1B. (Os02t0686100-00)
Sequence

ACCTCACACGCCTCTCGCGCTGCTCAATCTCCCACACTGCTCGGCAGCTTAGCTAGCTCG
CGGCTCGCTTGATCACGCCATTTTTCTTCGATTCGATCGATCTCCTGGTGTGCCAGCCAT
GGCGAGAATGCTCCTTGAGGCGGCCGCCTCCGGCTCGGTGGAGGACTCACTCAACTCGGA
CCTCGTCGTCATCCTCGCCGGGCTGCTCTGCGCGCTCATCTGCGTCCTCGGCCTCGGCCT
CGTCGCCCGGTGCGCGTGCACGCGCCGCTGGGCGCGGGCCGCCGGCGGCGGGACAGCGGC
TGGCGGCGGCGGCGGTGGCGCCGCCGCGGCGAACAAGGGCGTCAAGAAGGAGGTGCTGCG
GTCGCTCCCGACCGTGACGTACGTCTCCGACGGCGGCGGCGGCGAGGCGGAGGAGTGCGC
CATCTGCCTCGTGGAGTTCGAGGACGGGCAGGCCGTGCGCGTGCTGCCGCAGTGCGACCA
CCGCTTCCACGCCGCCTGCATCGACACGTGGCTGCGCGCGCACTCGTCGTGCCCGTCGTG
CCGCCGCGTGCTCGTCGCCGCCGAGATGCCCCCCGGCGAGCGGTGCGGCCGCTGCGGCGC
GCGCTCCGGCGGCCGCGGCATCGGCGCGCTGCTCTTGAATTACTGGAAGGCGCCGGCCTG
CGACGCCGAGGGGCCAGAGTTGGCGTAGTGGCATGCGCACTAACTCTGCGTCTGTCTGGT
CTTTAACCAAGATGGGAAAAAAAGAAGACATCATTAGACAGACATTAACCAGTGTGCAAC
CTCATTGGTTAATCTCTATTGATTTCTTTTCTTTCTTCCCTTTTCTTGGTTTTCATTTAG
CCTTGTAGATTCCATTCTTTTTTAGGTTTTGCCTGTGAGTACCAGTGAGTAGTGTGACTA
GCTAGCAATGGTGAGCATTTGGTAGCATCAGCTACCAGGATGTATGTAAGCACCGATTTG
TTGGGGGGAAATGTGTGAAAAATTGCTGTAACTTATTTGCACATATATTGGAATTTTATA
CGCAGTTATCTTTAACTGCGATGTTGAATCC