Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0685900-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:28086490:28092092:1 gene:Os02g0685900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 5 description:Similar to Calcium dependent protein kinase. (Os02t0685900-00)
Sequence

ATGGGGAACACGTGCGGCGTCACGCTTAGATCCAAGTACTTCGCCAGCTTCCGCGGCGCG
TCGCAGCGGCATGATGAGGCGGGGTACGCGCCCGTCGCCACCAGCGCCGCCGCCGCCGCC
GCCGCCGATGAGCCGGCCGGGAAGAAGGCCCCGCGCGGTTCTGCGGCGGCGGCGGACGCG
CCGCACGCCGCGTCCATGAAGCGCGGGGCGCCCGCGCCCGCGGAGCTGACGGCCAACGTG
CTCGGGCACCCGACCCCGAGCCTGAGCGAGCACTACGCGCTCGGGCGCAAGCTCGGGCAG
GGGCAGTTCGGCACCACCTACCTCTGCACCGACCTCGCCACCGGGGTGGACTACGCCTGC
AAGTCCATAGCCAAGCGGAAGCTCATCACCAAGGAGGACGTCGAGGACGTCCGCCGCGAG
ATCCAGATCATGCACCACCTCGCGGGCCACCGGAACGTCGTCGCCATCAAGGGCGCCTAC
GAGGACCCGCAGTACGTTCACATTGTGATGGAGCTCTGCGCCGGGGGCGAGCTGTTCGAC
CGCATCATCGAGCGCGGGCAATTCAGCGAGCGCAAAGCGGCCGAGCTCACGCGAATCATC
GTTGGTGTCATCGAGGCGTGCCACTCGCTCGGGGTTATCCATAGGGATCTCAAGCCCGAG
AACTTCTTGCTGGCGAATAAAGACGACGATTTGTCGCTCAAGGCCATCGATTTCGGCTTG
TCTGTGTTCTTCAAGCCTGGTCAAGTTTTTACTGATGTTGTTGGAAGCCCATACTACGTG
GCCCCAGAAGTGTTGCGTAAATGCTACGGACCAGAAGCTGATGTTTGGACAGCTGGTGTG
ATTCTTTACATACTATTAAGTGGTGTACCGCCATTTTGGGCAGAGACGCAGCAAGGGATA
TTTGATGCAGTGTTAAAAGGTGTAATTGATTTTGATTCCGATCCCTGGCCTGTGATTTCT
GATAGTGCAAAGGATCTTATAAGAAGAATGTTGAATCCTCGCCCCAAGGAGCGCCTAACA
GCTCATGAAGTTTTATGTCATCCGTGGATTTGTGACCATGGAGTCGCTCCTGATCGACCT
CTTGATCCTGCTGTACTTTCTCGCATTAAGCAGTTTTCAGCAATGAATAAGTTAAAGAAG
ATGGCTTTGCGAGTAATTGCTGAAAGCCTTTCAGAGGAGGAGATTGCAGGATTGAAGGAA
ATGTTCAAGGCAATGGACACAGATAATAGTGGTGCAATTACATATGATGAACTCAAAGAA
GGCATGAGAAAATATGGCTCAACACTAAAGGATACTGAGATTCGTGATCTTATGGAGGCG
GCGGATGTGGACAACAGTGGAACCATTGATTATATAGAATTCATTGCTGCTACTCTGCAT
CTCAATAAACTAGAGCGAGAGGAACATCTAGTGGCAGCCTTTTCTTATTTCGACAAAGAT
GGCAGTGGTTATATTACGGTGGATGAGCTTCAGCAAGCTTGCAAAGAGCATAACATGCCA
GATGCTTTTCTCGATGACGTCATTAAAGAAGCTGATCAGGATAATGATGGTCGCATTGAC
TACGGGGAATTCGTTGCCATGATGACAAAGGGCAATATGGGTGTTGGGAGGAGAACAATG
AGAAACAGCTTGAATATAAGCATGAGATGA

Peptide Sequence

PEP ID

Os02t0685900-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:28086490:28092092:1 gene:Os02g0685900 transcript:Os02t0685900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 5 description:Similar to Calcium dependent protein kinase. (Os02t0685900-00)
Sequence

MGNTCGVTLRSKYFASFRGASQRHDEAGYAPVATSAAAAAAADEPAGKKAPRGSAAAADA
PHAASMKRGAPAPAELTANVLGHPTPSLSEHYALGRKLGQGQFGTTYLCTDLATGVDYAC
KSIAKRKLITKEDVEDVRREIQIMHHLAGHRNVVAIKGAYEDPQYVHIVMELCAGGELFD
RIIERGQFSERKAAELTRIIVGVIEACHSLGVIHRDLKPENFLLANKDDDLSLKAIDFGL
SVFFKPGQVFTDVVGSPYYVAPEVLRKCYGPEADVWTAGVILYILLSGVPPFWAETQQGI
FDAVLKGVIDFDSDPWPVISDSAKDLIRRMLNPRPKERLTAHEVLCHPWICDHGVAPDRP
LDPAVLSRIKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITYDELKE
GMRKYGSTLKDTEIRDLMEAADVDNSGTIDYIEFIAATLHLNKLEREEHLVAAFSYFDKD
GSGYITVDELQQACKEHNMPDAFLDDVIKEADQDNDGRIDYGEFVAMMTKGNMGVGRRTM
RNSLNISMR

Transcript Sequence

Transcript ID

Os02t0685900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:28086490:28092092:1 gene:Os02g0685900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 5 description:Similar to Calcium dependent protein kinase. (Os02t0685900-00)
Sequence

CTCGCTTTCCGCAAACGTGGACGCGAACCCGTCGTGAAGCCTCCTCCTCCTCATCCAATC
CACCTCCCCCCTCTCTTTCCCAATCCCCACTGCTGCTTCCGTCCGCTTCCGATTCCAAGT
TTCCAACTCCCTCCATTGCTCGCCTCGCCGCGCCGCGCGCTACCTAAACCCCGCGGCGAG
GCTTTAGGGTAGATGCGAGAGGAGGCCGCGTGGACGGCGGCGCGCATCATCAGCGCGTGA
TGGGGAACACGTGCGGCGTCACGCTTAGATCCAAGTACTTCGCCAGCTTCCGCGGCGCGT
CGCAGCGGCATGATGAGGCGGGGTACGCGCCCGTCGCCACCAGCGCCGCCGCCGCCGCCG
CCGCCGATGAGCCGGCCGGGAAGAAGGCCCCGCGCGGTTCTGCGGCGGCGGCGGACGCGC
CGCACGCCGCGTCCATGAAGCGCGGGGCGCCCGCGCCCGCGGAGCTGACGGCCAACGTGC
TCGGGCACCCGACCCCGAGCCTGAGCGAGCACTACGCGCTCGGGCGCAAGCTCGGGCAGG
GGCAGTTCGGCACCACCTACCTCTGCACCGACCTCGCCACCGGGGTGGACTACGCCTGCA
AGTCCATAGCCAAGCGGAAGCTCATCACCAAGGAGGACGTCGAGGACGTCCGCCGCGAGA
TCCAGATCATGCACCACCTCGCGGGCCACCGGAACGTCGTCGCCATCAAGGGCGCCTACG
AGGACCCGCAGTACGTTCACATTGTGATGGAGCTCTGCGCCGGGGGCGAGCTGTTCGACC
GCATCATCGAGCGCGGGCAATTCAGCGAGCGCAAAGCGGCCGAGCTCACGCGAATCATCG
TTGGTGTCATCGAGGCGTGCCACTCGCTCGGGGTTATCCATAGGGATCTCAAGCCCGAGA
ACTTCTTGCTGGCGAATAAAGACGACGATTTGTCGCTCAAGGCCATCGATTTCGGCTTGT
CTGTGTTCTTCAAGCCTGGTCAAGTTTTTACTGATGTTGTTGGAAGCCCATACTACGTGG
CCCCAGAAGTGTTGCGTAAATGCTACGGACCAGAAGCTGATGTTTGGACAGCTGGTGTGA
TTCTTTACATACTATTAAGTGGTGTACCGCCATTTTGGGCAGAGACGCAGCAAGGGATAT
TTGATGCAGTGTTAAAAGGTGTAATTGATTTTGATTCCGATCCCTGGCCTGTGATTTCTG
ATAGTGCAAAGGATCTTATAAGAAGAATGTTGAATCCTCGCCCCAAGGAGCGCCTAACAG
CTCATGAAGTTTTATGTCATCCGTGGATTTGTGACCATGGAGTCGCTCCTGATCGACCTC
TTGATCCTGCTGTACTTTCTCGCATTAAGCAGTTTTCAGCAATGAATAAGTTAAAGAAGA
TGGCTTTGCGAGTAATTGCTGAAAGCCTTTCAGAGGAGGAGATTGCAGGATTGAAGGAAA
TGTTCAAGGCAATGGACACAGATAATAGTGGTGCAATTACATATGATGAACTCAAAGAAG
GCATGAGAAAATATGGCTCAACACTAAAGGATACTGAGATTCGTGATCTTATGGAGGCGG
CGGATGTGGACAACAGTGGAACCATTGATTATATAGAATTCATTGCTGCTACTCTGCATC
TCAATAAACTAGAGCGAGAGGAACATCTAGTGGCAGCCTTTTCTTATTTCGACAAAGATG
GCAGTGGTTATATTACGGTGGATGAGCTTCAGCAAGCTTGCAAAGAGCATAACATGCCAG
ATGCTTTTCTCGATGACGTCATTAAAGAAGCTGATCAGGATAATGATGGTCGCATTGACT
ACGGGGAATTCGTTGCCATGATGACAAAGGGCAATATGGGTGTTGGGAGGAGAACAATGA
GAAACAGCTTGAATATAAGCATGAGATGAGACGCACCTGGTGCACTATGAAGTCTGAACG
TCCACAGTGCAGCTTTGAAACTTCTTCAATCTCCATGCTCTATACGGACACTGCCTGCAA
TTTTTGTACGCTGTCAGTTGTAGCCTTGTAGGTGTGGGTATGTGTTTCAGGTTCAGGGGA
TTCTAATTGTTCATCTAATTCAACAGTCGGTATGTGTTTCAGGTTCAGGGAATTCTAATT
GTTCATCTAATTCAACTGCTCCTGTTATTTCTACGAAATGCACGGGGTGGGAAAGTGCCC
ATGCCATGCGC