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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0682300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:27887212:27888250:-1 gene:Os02g0682300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0682300-01)
Sequence

ATGGGGTTCCCTCTGGTGTGCTACTGCATGGCGATCCCCAAGCCGCTCATCGCCTTGGCC
AAGCTCCTCGCCGCCATCAGGGAGGCCCTCCAGCTGATGCTCTTCGTCGTCGGGATCTGC
CACCACCCGGAGCGATCGGGCCGCCCGGCTGCCGTCGACGCCCCGCTGCCCGACGAGGTG
AAGGACCGCCTCCCGCCCCTCGAGTTCGCCCAGCTGCTCGCGGCCTCGGAGCACGGCTGT
CATGGCTGCGACGACGACGAGGCGGTGGCGGGGTGCATCGTGTGCCTGGAGAGGCTGGAG
GCGGATGACGTGGTGCGGCGGCTGGGCAACTGCGCGCACGCGTTCCACCGCGGCTGCATC
GACCGGTGGATCGACCTCGGCCGGTTGACGTGCCCGCTGTGCCGCTCCACCCTGCTGCCG
CGCGCGCGCCCCGCCGCCGGCCCGCGCGGGCGACTGGGCCGCCTCGCCACCCGCCTCACG
GGCGTCGTTTGGTGA

Peptide Sequence

PEP ID

Os02t0682300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:27887212:27888250:-1 gene:Os02g0682300 transcript:Os02t0682300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0682300-01)
Sequence

MGFPLVCYCMAIPKPLIALAKLLAAIREALQLMLFVVGICHHPERSGRPAAVDAPLPDEV
KDRLPPLEFAQLLAASEHGCHGCDDDEAVAGCIVCLERLEADDVVRRLGNCAHAFHRGCI
DRWIDLGRLTCPLCRSTLLPRARPAAGPRGRLGRLATRLTGVVW

Transcript Sequence

Transcript ID

Os02t0682300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27887212:27888250:-1 gene:Os02g0682300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0682300-01)
Sequence

GTCACTCGTCACCATCCTCCCCCTTTGCTTTCCACGACTCTCTTTCGCCGCAGTCTCTGC
TTCCGTGCATCCATCGGCGTTCGGCGACTCGGTGTATAGTAGTATTGCCAACTGTGCGTA
GCAAGCTCGATACAGCGGCGATCATGGGGTTCCCTCTGGTGTGCTACTGCATGGCGATCC
CCAAGCCGCTCATCGCCTTGGCCAAGCTCCTCGCCGCCATCAGGGAGGCCCTCCAGCTGA
TGCTCTTCGTCGTCGGGATCTGCCACCACCCGGAGCGATCGGGCCGCCCGGCTGCCGTCG
ACGCCCCGCTGCCCGACGAGGTGAAGGACCGCCTCCCGCCCCTCGAGTTCGCCCAGCTGC
TCGCGGCCTCGGAGCACGGCTGTCATGGCTGCGACGACGACGAGGCGGTGGCGGGGTGCA
TCGTGTGCCTGGAGAGGCTGGAGGCGGATGACGTGGTGCGGCGGCTGGGCAACTGCGCGC
ACGCGTTCCACCGCGGCTGCATCGACCGGTGGATCGACCTCGGCCGGTTGACGTGCCCGC
TGTGCCGCTCCACCCTGCTGCCGCGCGCGCGCCCCGCCGCCGGCCCGCGCGGGCGACTGG
GCCGCCTCGCCACCCGCCTCACGGGCGTCGTTTGGTGAATCAATATTTGGCCCGCGCGAC
CGCGACGCGACACGGGATCGGTTGGGTGGGAGGGCAGTCGCGCCATTTCACAGCCTAAGC
TAGCTTACTGCTGCTGTTAATCAACGGAGACAAAGCTCTCTTTCCCTTTCGTTTCCTTTT
TCTTTTTCTGCCGAGGATTATCCAGCTGGAGGAGAGTGGTACGTGTCGGAATGCGGTGGA
ATATATCGATGATTAGACGGTAGGAACAATTAATTAGAAGCAGGCAAGCAGCTGGTTGGT
TGGCCCGGCCTGGCACCTGGCATGATCATTGGGAGGTTCATGTAATTACTGCGATGATTA
GATACTGCATGTAAGTAAATCATGTCATAGAGATAATACACCTGTGTACAGTGGTATAAT
GATAAACGGTTCATTTGGT