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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0681200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:27807061:27808092:-1 gene:Os02g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0681200-01)
Sequence

ATGGGCTTCCCGGTGGGCTACTCGGAGCTGCTCCTCCCGAGGCTGCTGCTCCAGGTGCTC
CTCCTCCTCGGCCACCTCCATCGCTTTCTCCTCTGGGCCTTCCACGCAGTCGGCCTCGGC
GACCTCATCGACAACCCGCCCGGCCTGGCGGCCACGGAGCAGGACCTGATGCTGCAGGGG
CGCGGCGGCGGGATGGCGGAGGGTTGGGCGTCGTCGTCGGCGCTCCAGCACCGCCGGCCC
GAGTTCAGGGCGATTCCGCCGATGGCCATCGAGGAGGCCCTCCCCGTGGTGCGGTTCGAC
GAGCTGGTGGCGTCCGCCCCGGCGGCGGTGTGCGGTGGCGGCGACTGCGCGGTCTGCCTC
AGCGGCATCTGCGGGCGCGACGAGGTGCGGCGGCTGTCCAACTGCCGCCACGTTTTCCAC
CGCGGCTGCCTCGACCGCTGGATGGCCCACGAGCAGCGCACCTGCCCGCTCTGCCGCGCG
CCGCTCATCCCCGACGAGCTCTTGCCCGCCGCCTCCGGCCTGCCTGACCCCTCCGACTAC
GACCTCTCGTACTACCCATCCCCGCTGCCGCTGGCGCCCACCCCGACGCTGCTGCGACCA
CACGAGCTGCTGCTCAACGGCTTGGGCGGTTTCCAGTGA

Peptide Sequence

PEP ID

Os02t0681200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:27807061:27808092:-1 gene:Os02g0681200 transcript:Os02t0681200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0681200-01)
Sequence

MGFPVGYSELLLPRLLLQVLLLLGHLHRFLLWAFHAVGLGDLIDNPPGLAATEQDLMLQG
RGGGMAEGWASSSALQHRRPEFRAIPPMAIEEALPVVRFDELVASAPAAVCGGGDCAVCL
SGICGRDEVRRLSNCRHVFHRGCLDRWMAHEQRTCPLCRAPLIPDELLPAASGLPDPSDY
DLSYYPSPLPLAPTPTLLRPHELLLNGLGGFQ

Transcript Sequence

Transcript ID

Os02t0681200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27807061:27808092:-1 gene:Os02g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0681200-01)
Sequence

TCCCCACCACGCACGCACCGCACAGACGCAAGCTCACCTCAGCTCAGCTCACAATTCGGC
TGTATCCAAGATCGCCATGGGCTTCCCGGTGGGCTACTCGGAGCTGCTCCTCCCGAGGCT
GCTGCTCCAGGTGCTCCTCCTCCTCGGCCACCTCCATCGCTTTCTCCTCTGGGCCTTCCA
CGCAGTCGGCCTCGGCGACCTCATCGACAACCCGCCCGGCCTGGCGGCCACGGAGCAGGA
CCTGATGCTGCAGGGGCGCGGCGGCGGGATGGCGGAGGGTTGGGCGTCGTCGTCGGCGCT
CCAGCACCGCCGGCCCGAGTTCAGGGCGATTCCGCCGATGGCCATCGAGGAGGCCCTCCC
CGTGGTGCGGTTCGACGAGCTGGTGGCGTCCGCCCCGGCGGCGGTGTGCGGTGGCGGCGA
CTGCGCGGTCTGCCTCAGCGGCATCTGCGGGCGCGACGAGGTGCGGCGGCTGTCCAACTG
CCGCCACGTTTTCCACCGCGGCTGCCTCGACCGCTGGATGGCCCACGAGCAGCGCACCTG
CCCGCTCTGCCGCGCGCCGCTCATCCCCGACGAGCTCTTGCCCGCCGCCTCCGGCCTGCC
TGACCCCTCCGACTACGACCTCTCGTACTACCCATCCCCGCTGCCGCTGGCGCCCACCCC
GACGCTGCTGCGACCACACGAGCTGCTGCTCAACGGCTTGGGCGGTTTCCAGTGAGCCCG
CCAATCCACCGCCCCGGTCAATTTCGTTGCAACCGGCATGACAGAGCTGCCTCAACTACG
GCACACGGGCACATAGGCGTCCTGATTTGTACATAGGCGCCAAGGAGAACTCCCCCCAAA
AAAACACAAGTAGGAATAGTTTGCTGCTATATAGGTCGATTCCACCTTCCAAGCCTGCGA
AGTTGTGAATCCTTTTTTTTTTGCAGATTACTAGTAGTATATTAAATTTGTTGAAGCAGA
GCAGTGCCACAGTTTGGTGCTTGCTAATTTGGCAAGCCGTTTAATCCAATCTCCCCACGC
TATTCAAATCTT