Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0678300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27702873:27705211:1 gene:Os02g0678300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein HOTHEAD. (Os02t0678300-01)
Sequence	ATGGCATTCCTCGTTGCCACGACCCTGTTTCTGTTTGGGCAGCTACTGCTGTGCTTCTCT CAACAAGTGCGAGGTGTGAACTACACGTTCATGAGGGAGGCGGTGGAGGCGCCGGTGATG GCGTACTACGACTACATCATCATAGGCGGGGGCACGGCGGGGTGCCCGCTGGCGGCGACG CTGTCGGAGCGGTACCGCGTGCTCCTGCTCGAGCGCGGGGGCTCGCCGTACGACGACGCG CGCGTCCTCAACATGGCGCACTTCGCGGACGTGCTCGCGGACACGTCCGGGGCGTCCCCG TCGCAGCGGTTCGTGTCGGAGGACGGCGTGATCAACGCGCGGCCGCGGGTGCTGGGCGGC GGCAGCTGCATCAACGCCGGCTTCTTCACGCGCGCGGGGCCCGGCTACGTGAGGGCCCTC GGGTGGGACCCCAAGGAGGTGGTGAGCGCGTACCAGTGGGTGGAGGACGTGGTGGCGTTC CAGCCGGAGCTGGGCCCGTGGCAGGCGGCGCTGCGGAGGGGGTTGCTCGAGATCGGCGTC GTGCCGGACAACGGCTTCACGTACGACCACATCCTCGGTACCAAGGTCGGTGGCTCCATC TTTGACGCGCAGGGACGGCGGCACACGGCGGCGGACTTGCTGCGTTACTCGCGCCCCGAC GGCATCGACGTGTTTCTCCGTGCTAGAGTGGCCAGGATCGTGTTCTCTCGCAAAGGGACC AAGCCCGTGGCGCGTGGCGTGCTGTACCACGACGCGCGGGGTGGATCGCACATGGCGTAC CTCAACCATGGCGCTAGAAACGAGATCATCCTGTCAGCGGGGGCGCTGGGCAGCCCGCAG CTGCTGATGCTCAGCGGCGTCGGCCCCGCCGACCACCTCGAGGAGTTTGGCATCAGCCTC GTCCTCGACCACCCAGGCGTCGGGCAGGGCATGTCCGACAACCCCATGAACGCCATCTAC GTGCCGTCGCCGTCGCCGGTGGAGCTGTCGCTCATCCAGGTGGTCGGCATCACCAGGTTC GGCAGCTACATCGAGGGCGCAAGCGGGTCCGACTGGAACAGCCGCACCTCGGGCGCCGCC GCCGCGCAGGTGCGGAGCTTCGGCATGTTCTCGCCGCAGACGGGCCAGCTCGCGACGGTG CCACCGAAGCAGCGCACGCCCGAGGCCATCGCGCGCGCCGTGGAGGCCATGAGCCAGGTC CCCGACGCGGCGCTCCGCGGCGGCTTCATCCTGGAGAAGGTGCTCGGCCCGCAGTCCACC GGCCGCCTCGCGCTCCGCAACCTGGACCCCGACGACAACCCCACCGTCAGCTTCAACTAC TTCAGCCACCCCGACGACCTCCGCCGCTGCGCCGCGGGCATCGCGACCATCGAGCGGGTC ATCCGGTCCAGGGCCTTCTCGCGGTTCGCGTACCCGAACTTCGCCTTCCCGGCGACGATC AACGTCACGGCCGAGTTCCCGGCGAACCTGATGCGCATGCGCGGCGGCAGCGACCCCAGG GCGCTGGAGCAGTTCTGCCGGGACACCGTCATGACCATCTGGCACTACCACGGCGGCTGC CAGGTCGGCAGGGTCGTCGACCGCGACTACCGTGTGCTCGGCATCGAGGCGCTGCGCGTC ATCGATGGTTCCACGTTCAACGCCTCGCCGGGGACTAACCCGCAGGCCACCGTCATGATG CTTGGCAGGTACATGGGAGTCAAGATCCAAAAGGAGAGGATGATAGCTGAAGGATCAGGA ATAGAACCATAG

Peptide Sequence

PEP ID	Os02t0678300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27702873:27705211:1 gene:Os02g0678300 transcript:Os02t0678300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein HOTHEAD. (Os02t0678300-01)
Sequence	MAFLVATTLFLFGQLLLCFSQQVRGVNYTFMREAVEAPVMAYYDYIIIGGGTAGCPLAAT LSERYRVLLLERGGSPYDDARVLNMAHFADVLADTSGASPSQRFVSEDGVINARPRVLGG GSCINAGFFTRAGPGYVRALGWDPKEVVSAYQWVEDVVAFQPELGPWQAALRRGLLEIGV VPDNGFTYDHILGTKVGGSIFDAQGRRHTAADLLRYSRPDGIDVFLRARVARIVFSRKGT KPVARGVLYHDARGGSHMAYLNHGARNEIILSAGALGSPQLLMLSGVGPADHLEEFGISL VLDHPGVGQGMSDNPMNAIYVPSPSPVELSLIQVVGITRFGSYIEGASGSDWNSRTSGAA AAQVRSFGMFSPQTGQLATVPPKQRTPEAIARAVEAMSQVPDAALRGGFILEKVLGPQST GRLALRNLDPDDNPTVSFNYFSHPDDLRRCAAGIATIERVIRSRAFSRFAYPNFAFPATI NVTAEFPANLMRMRGGSDPRALEQFCRDTVMTIWHYHGGCQVGRVVDRDYRVLGIEALRV IDGSTFNASPGTNPQATVMMLGRYMGVKIQKERMIAEGSGIEP

Transcript Sequence

Transcript ID	Os02t0678300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27702873:27705211:1 gene:Os02g0678300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein HOTHEAD. (Os02t0678300-01)
Sequence	ATCAAACACGACGCACATTCCTGATCTCGTCAGCACAGACGCAGACGATGGCATTCCTCG TTGCCACGACCCTGTTTCTGTTTGGGCAGCTACTGCTGTGCTTCTCTCAACAAGTGCGAG GTGTGAACTACACGTTCATGAGGGAGGCGGTGGAGGCGCCGGTGATGGCGTACTACGACT ACATCATCATAGGCGGGGGCACGGCGGGGTGCCCGCTGGCGGCGACGCTGTCGGAGCGGT ACCGCGTGCTCCTGCTCGAGCGCGGGGGCTCGCCGTACGACGACGCGCGCGTCCTCAACA TGGCGCACTTCGCGGACGTGCTCGCGGACACGTCCGGGGCGTCCCCGTCGCAGCGGTTCG TGTCGGAGGACGGCGTGATCAACGCGCGGCCGCGGGTGCTGGGCGGCGGCAGCTGCATCA ACGCCGGCTTCTTCACGCGCGCGGGGCCCGGCTACGTGAGGGCCCTCGGGTGGGACCCCA AGGAGGTGGTGAGCGCGTACCAGTGGGTGGAGGACGTGGTGGCGTTCCAGCCGGAGCTGG GCCCGTGGCAGGCGGCGCTGCGGAGGGGGTTGCTCGAGATCGGCGTCGTGCCGGACAACG GCTTCACGTACGACCACATCCTCGGTACCAAGGTCGGTGGCTCCATCTTTGACGCGCAGG GACGGCGGCACACGGCGGCGGACTTGCTGCGTTACTCGCGCCCCGACGGCATCGACGTGT TTCTCCGTGCTAGAGTGGCCAGGATCGTGTTCTCTCGCAAAGGGACCAAGCCCGTGGCGC GTGGCGTGCTGTACCACGACGCGCGGGGTGGATCGCACATGGCGTACCTCAACCATGGCG CTAGAAACGAGATCATCCTGTCAGCGGGGGCGCTGGGCAGCCCGCAGCTGCTGATGCTCA GCGGCGTCGGCCCCGCCGACCACCTCGAGGAGTTTGGCATCAGCCTCGTCCTCGACCACC CAGGCGTCGGGCAGGGCATGTCCGACAACCCCATGAACGCCATCTACGTGCCGTCGCCGT CGCCGGTGGAGCTGTCGCTCATCCAGGTGGTCGGCATCACCAGGTTCGGCAGCTACATCG AGGGCGCAAGCGGGTCCGACTGGAACAGCCGCACCTCGGGCGCCGCCGCCGCGCAGGTGC GGAGCTTCGGCATGTTCTCGCCGCAGACGGGCCAGCTCGCGACGGTGCCACCGAAGCAGC GCACGCCCGAGGCCATCGCGCGCGCCGTGGAGGCCATGAGCCAGGTCCCCGACGCGGCGC TCCGCGGCGGCTTCATCCTGGAGAAGGTGCTCGGCCCGCAGTCCACCGGCCGCCTCGCGC TCCGCAACCTGGACCCCGACGACAACCCCACCGTCAGCTTCAACTACTTCAGCCACCCCG ACGACCTCCGCCGCTGCGCCGCGGGCATCGCGACCATCGAGCGGGTCATCCGGTCCAGGG CCTTCTCGCGGTTCGCGTACCCGAACTTCGCCTTCCCGGCGACGATCAACGTCACGGCCG AGTTCCCGGCGAACCTGATGCGCATGCGCGGCGGCAGCGACCCCAGGGCGCTGGAGCAGT TCTGCCGGGACACCGTCATGACCATCTGGCACTACCACGGCGGCTGCCAGGTCGGCAGGG TCGTCGACCGCGACTACCGTGTGCTCGGCATCGAGGCGCTGCGCGTCATCGATGGTTCCA CGTTCAACGCCTCGCCGGGGACTAACCCGCAGGCCACCGTCATGATGCTTGGCAGGTACA TGGGAGTCAAGATCCAAAAGGAGAGGATGATAGCTGAAGGATCAGGAATAGAACCATAGT CTGCTTCTCTGCATGATACACGAGCGCGCTGCATTTGCTAATTTCTCTCTGGATTATCTT TAGTGATCATCCTATAGATCGGAAATGCTAATTGTAATCGTTGAAATTACATTATTAACT AATTTGCACGATTGTGAATGCTATGCTACCT