Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0677700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27662418:27667350:1 gene:Os02g0677700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 17 description:Similar to Nucleic acid binding protein. (Os02t0677700-01);Similar to Isoform 2 of Zinc finger CCCH domain-containing protein 17. (Os02t0677700-02)
Sequence	ATGGACATAGAGACCGACGGTCGCTTCGGCAACAAGCGCGTGCACCACCGCCTCGGCCCG GCCAACGGCGCCGCCTCCTCGTCCACCTCCGGGAAGGTCTGCATCCACTGGCGCGCCGGC CGATGCAATCGCTTCCCCTGCCCTTACCTCCACAGCGAGCTCCCCGAGGCGACAGCCAAG CGCCCGAGCCAAAGCGGCGGCGGCGGGAACGTCTGGAGGAATCCCCACTCAGGAGGTGGA GGGGGCCGCGGCGCCGGCGGCGCCGGGGGCCCGAACAAATGGGGGAGGGGCCCCGGAGGT GCGGATGGTGGCCCGAGGCACAAGGTGCCCGATCGGCCCTGCAGGTACTTCCTCGCCGGC GACTGCAGCTACGGGGAGAAGTGCCGATACCCTCACTCCTACTCCATGAGCGATAGCATC ACGATGCTTACTCCGCTCCAGGGCCACGAGAAGGTTGTGACAGGGATTGCACTGCCGGCT GGGTCAGACAAGCTGTATTCTGGGAGTAAGGACGGAACTGTGCGCATGTGGGATTGCCAA ACTGGGCAGTGTGCTGGTGTCATCAATATGGGACGTGAGATCGGGTGCATGATCAGTGAG GGGCCATGGTTATTTGTTGGGATTCCAGATGCTGTGAAGGTTTGGAATATGCAAACACAA GCGGAAATGAACCTTACTGGGCCAACGGGGCAAGTCTATGCACTCGCTGTTGGAAATGAG CTACTCTTTGCCGCAACACAAGATGGACGGATTTTGGCCTGGAGATTCAGCGCTGCAACA AATGGTTTTGAACCAGCTGCCTCTCTTGTTGGGCACCAGCTTGCTGTCGTTTCATTAGTA GTAGGAGCCATGAGGCTTTACTCTGCTTCAATGGACAAAACAATTAGAGTGTGGGATTTG GCAACACTGCAGTGCATACAGACTCTTTCTGATCATACAGGTGTTGTTATGTCTGTATTG TGTTGGGATCAATTCCTATTATCATGTTCCTTGGATCAAACAATAAAAGTTAGTCTCTGT CCTTGA

Peptide Sequence

PEP ID	Os02t0677700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27662418:27667350:1 gene:Os02g0677700 transcript:Os02t0677700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 17 description:Similar to Nucleic acid binding protein. (Os02t0677700-01);Similar to Isoform 2 of Zinc finger CCCH domain-containing protein 17. (Os02t0677700-02)
Sequence	MDIETDGRFGNKRVHHRLGPANGAASSSTSGKVCIHWRAGRCNRFPCPYLHSELPEATAK RPSQSGGGGNVWRNPHSGGGGGRGAGGAGGPNKWGRGPGGADGGPRHKVPDRPCRYFLAG DCSYGEKCRYPHSYSMSDSITMLTPLQGHEKVVTGIALPAGSDKLYSGSKDGTVRMWDCQ TGQCAGVINMGREIGCMISEGPWLFVGIPDAVKVWNMQTQAEMNLTGPTGQVYALAVGNE LLFAATQDGRILAWRFSAATNGFEPAASLVGHQLAVVSLVVGAMRLYSASMDKTIRVWDL ATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQTIKVSLCP

Transcript Sequence

Transcript ID	Os02t0677700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27662418:27667350:1 gene:Os02g0677700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 17 description:Similar to Nucleic acid binding protein. (Os02t0677700-01);Similar to Isoform 2 of Zinc finger CCCH domain-containing protein 17. (Os02t0677700-02)
Sequence	ATGTAGAACTAGAACCCATCTCAGCTCACCCGCAGTCGCGCGACCCTGGGAAAAAAGGGC CACCCATCAGTGCCTTCTCCTCTCCTCTCTCTTCTCTTCTCTCTCTCCGATCCGGATCTT CCTACCCACTCCGGCGAGCCCTCGCCGCGTCGCCTCCACGCGACTCGCTCCCGTATATCG GCGCTTCCCTTAGCCGCTGCCGCCGCCCGCCTATACCACCAGCTATATCCGATTGCCTCC TCCCCCTTTCGCGCCTCTGTCCCGCGCCCCACCAAACCCTAGGCGCGCCGCCCATGGACA TAGAGACCGACGGTCGCTTCGGCAACAAGCGCGTGCACCACCGCCTCGGCCCGGCCAACG GCGCCGCCTCCTCGTCCACCTCCGGGAAGGTCTGCATCCACTGGCGCGCCGGCCGATGCA ATCGCTTCCCCTGCCCTTACCTCCACAGCGAGCTCCCCGAGGCGACAGCCAAGCGCCCGA GCCAAAGCGGCGGCGGCGGGAACGTCTGGAGGAATCCCCACTCAGGAGGTGGAGGGGGCC GCGGCGCCGGCGGCGCCGGGGGCCCGAACAAATGGGGGAGGGGCCCCGGAGGTGCGGATG GTGGCCCGAGGCACAAGGTGCCCGATCGGCCCTGCAGGTACTTCCTCGCCGGCGACTGCA GCTACGGGGAGAAGTGCCGATACCCTCACTCCTACTCCATGAGCGATAGCATCACGATGC TTACTCCGCTCCAGGGCCACGAGAAGGTTGTGACAGGGATTGCACTGCCGGCTGGGTCAG ACAAGCTGTATTCTGGGAGTAAGGACGGAACTGTGCGCATGTGGGATTGCCAAACTGGGC AGTGTGCTGGTGTCATCAATATGGGACGTGAGATCGGGTGCATGATCAGTGAGGGGCCAT GGTTATTTGTTGGGATTCCAGATGCTGTGAAGGTTTGGAATATGCAAACACAAGCGGAAA TGAACCTTACTGGGCCAACGGGGCAAGTCTATGCACTCGCTGTTGGAAATGAGCTACTCT TTGCCGCAACACAAGATGGACGGATTTTGGCCTGGAGATTCAGCGCTGCAACAAATGGTT TTGAACCAGCTGCCTCTCTTGTTGGGCACCAGCTTGCTGTCGTTTCATTAGTAGTAGGAG CCATGAGGCTTTACTCTGCTTCAATGGACAAAACAATTAGAGTGTGGGATTTGGCAACAC TGCAGTGCATACAGACTCTTTCTGATCATACAGGTGTTGTTATGTCTGTATTGTGTTGGG ATCAATTCCTATTATCATGTTCCTTGGATCAAACAATAAAAGTTAGTCTCTGTCCTTGAC TTTATGTTGTTTAATAATTTTGCAGATATGTCTTCACATTCCATATCTTACCCTTTTCAT TGCATTTCACACTCGTTCATTTTGTTCCTGTTCTTCTAACATCATATCTGTAATCACGTT TTATCCTTTCAGTGCATTCATACTTCTACGCTGTGTTTCTCTTCAGGTTTGGGCAGCTAC AGAAAGTGGAAGCTTGGAAGTAACATATACACACAAAGAGGAGCATGTATGTGACTCGAT ACTCAATACTCTTAATAAGCGATTGCACAGGGGTTATGTTCTGTTACACCCTGATGTACT AAATCCTTATTATATTTAATTTGTTCATTTTCACAAAAACATGTTACCCTTTCTGGCGAA CTTCTAGACAGTACCATTTTATGGTTTTATGTAATGGGTGTCATCTCCCGCCCTGTTTAT TATGGAATATAAATAATACTGATCAGTGATCCTGTTTATACTCCTTTGAACTTACCGTTA GGATTTCCTTTACACTTCCCCATGCTAAATGTTTTACATACAGATTAGCAATTTGTCTAC TATTAAGACAGCTATTACTCCCTCCATCTCAAAATATAACTATTAGAGCTGGACCATTGA GCGAATTGGATCAGTTCACTGGTTTTGCCAGCACTTCAACAACAATTAAACTGGCAATTT AATCATTTCAACATTTAGATGTTTATTTGCATGCTTTATCTAGCTTCTATACAAGTTAGT GCCCTTATTACACAAGAGCCGCAAGCTACCAAAGTTAATGAAGGCACTAGGCACTAGTTG GGCCACTGAGGTGCAATGAGCACCTAGCCTGCATGTCATGGTATGACTGGTGGCAGAGCC AGAAGCGTAAAAAAATATTTATTGGAGGGGGCTGATAATACTAGTTATGATATTTCATAA AAGCAAAAATAATTAGTGTGAATTATTAGAAATTGAGGGAGGCCGAATCCCTGCTTGCCC TTTCCTGTCTCTGCCCCCTGCGTATGACATCAGAACTTGATTTGTGAGTTTTCTAATGGC TTTGCCTGCCACCCTTTCCTGCTACAGAGCCAATATTTCTGTAGTGATTCACATAGCCAA TATTCATGTAGTGATTTGCAGGATACTTCATGTAACTGCCTAAAATATAAATGTGTTTAC AAGCATCATCTATTAGTAAAAATACATGTTCCTTATTATTTGTAACACAAGTAAGTCTGG CGATGTATGCCAGATTGAATGCTTTAAATGGAAGTTAATAAATCCAATGAAATCTGTACA CAGGTAAAATGACATGTTATACGAGTCATGTACTATAACTACACTAATACCACATTGGTG TGCTGGCATTTTGAATTTTGAATAATCACTTCTGTTCCGTCAGTACTAGTTCCATAAGAG TGTGTCCTTTCATGGTCACACACTTTTGCCTTTGAGAAACCAATCCTTTCCATTATTAAT ATAGTATGGCATCTGCCTTGCACAAAATTTGGAAACACGCATGCCCTTTACTTCTGTCAA ATTTCTTCATTTCAATTTCCAATGCTCTGATGGCTTTGTTTTATCTGTAGGGAGCACTTG CCCTAAGTGGCATGCCTGATGCACAATCAAAACCTGTGCTACTATGTTCACTAAATGACA ACACTGTCCGACTATATGACCTGCCATCGTTCAGTGATAGGGGCAGGATATTCTCAAAAC AGGAAATAAGGGCAATACAAGTTGGTCCTAGTGGTTTATTTTTTACTGGGGATGGAACTG GTGAGCTGAAGGTGTGGCAATGGGTTATTGATGGATCCCAGACCAAATGAATATAGTGTA CTCTAGATTAGTTTCCCCCCTTTATTTGGTGAGGGATAAAGAACACATGCATAATGATTT GAGATGTGGTTGGCGGCCAGTTCTGTCCTTGCATGTCCTAAATTTATTCTCCGAGGGTAT GAGATTCAATTGGATCGCCTTGCAGTTAGATTACAAGCTAAGTCTCACCATGGACGAGAG TTTCTGTCCTGGAATGAGTTTCACGTGAGGGCAATAATTTCTTGTAATATGTAAAGCACT GGAAGTCTGGAACCAACAAGTACATCTGATCACTGTTACGATGTGCTGGTAGTTCAGAGG ATGTATCAATATAAAGGTTTTGCTCGGCTGCATTTGTATTAAGGAACTCAAATTTTCACA GCAATACAATTGTTTGTTGTTCTC