Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0674800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27487866:27494913:-1 gene:Os02g0674800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE OUTMOST CELL-SPECIFIC GENE 5 description:Similar to OCL1 homeobox protein. (Os02t0674800-01)
Sequence	ATGAGCTTTGGGGGCCTCTTTGACGGCGGCGGCGGGGGAGGCATGCAGTTCCCTTTCGCC AGTGGCTTCGCGTCCTCGCCGGCGCTCTCCCTCGCGCTGGACAACGCCGGCGGTGGCATC GGCGGGCGGATGCTCGGCGGCGGCGCTGGCGCTGGTTCTAGCGCGGGCGGCGCGATGACG AGGGACACTGAGGCGGAGAACGACAGCCGGTCGGGAAGCGACCATCTCGACGCCATCTCG GCCGCCGGCGAGGACGACGTCGAGGACGCCGAGCCCAGCAACTCCCGCAAGAGGAAGAAG CGATACCACCGCCACACGCCGCAGCAGATCCAAGAGCTCGAAGCGCTGTTCAAGGAGTGC CCCCATCCGGACGAGAAGCAGCGCGCCGAGCTCAGCAGGAGGCTCTCCCTCGATGCGCGG CAGGTCAAGTTCTGGTTCCAGAATCGCCGCACGCAGATGAAGACGCAACTGGAGCGGCAC GAGAACGCGCTTCTCAAGCAGGAGAACGACAAGCTGCGCGCCGAGAACATGACGATCCGG GAGGCGATGCGCAGCCCAATGTGCGGCAGCTGCGGGAGCCCCGCCATGCTCGGGGAGGTG TCCCTAGAGGAGCAGCACCTGCGCATCGAGAATGCGCGCCTCAAGGACGAGCTCAACCGC GTGTGCGCCCTCGCCACCAAGTTCCTAGGCAAGCCCATCTCCCTCCTGTCGCCGCCGCCC TTGCTGCAGCCGCACCTCTCGCTGCCTATGCCTAACTCGTCGCTGGAGCTAGCGATCGGA GGCATCGGTGGCTTAGGGTCTCTCGGTACACTACCCGGCTGTATGAATGAGTTCGCCGGA GGCGTGTCGAGCCCGATGGGCACGGTGATCACGCCTGCGCGCGCAACCGGGGCTGCTATA CCATCGCTGGTGGGTAACATCGACAGGTCCGTGTTCTTAGAGCTTGCAATCAGCGCGATG GACGAACTTGTCAAGATGGCACAGATGGACGATCCATTGTGGGTTCCGGCACTGCCTGGT TCTCCCAGCAAGGAGGTGCTCAACTTTGAGGAGTATCTTCACTCCTTCCTACCGTGCATT GGCATGAAGCCTGCCGGCTACGTCTCTGAGGCCTCGAGGGAATCCGGTCTAGTCATCATC GACAACAGCCTTGCCCTTGTAGAGACCCTCATGGATGAGAGACGGTGGTCTGACATGTTC TCGTGCATGATTGCTAAGGCAACAGTGCTTGAGGAGGTGTCTACCGGCATTGCAGGAAGC AGAAATGGCGCGTTGCTGCTGATGAAGGCTGAGCTACAGGTGCTCTCACCTCTAGTACCA ATTAGGGAGGTTACATTTCTCCGGTTTTGTAAGCAGCTGGCTGAGGGTGCATGGGCAGTA GTTGATGTGTCCATTGATGGTTTAGTGAGAGATCATAATTCTGGAACGGCACCCACAGGT GGAAATGTGAAGTGTAGGAGGGTACCTTCCGGCTGTGTGATGCAAGACACTCCCAATGGG TATTGCAAGGTCACATGGGTTGAGCATACGGAATACGATGAGGCATCAGTGCACCAGCTC TACCGTCCACTCCTTCGGTCTGGTCTCGCCTTTGGCGCCAGGCGTTGGCTTGCGACGCTG CAGCGCCAATGCGAATGCCTTGCCATCCTCATGTCCTCTGCTACAGTGACAGCAAATGAC TCGACTGCTATATCGCAAGAGGGCAAGCGAAGCATGCTGAAGCTGGCACGCCGGATGACG GAGAACTTCTGTGCTGGGGTGAGCGCATCGTCTGCACGTGAATGGAGCAAGCTGGATGGT GCGACCGGTAGCATCGGGGAGGACGTGCGCGTGATGGCACGGAAGAGCGTGAGCGAGCCT GGAGAGCCACCGGGCGTGGTGCTGAGCGCGGCCACCTCGGTGTGGGTGCCCGTGGCTCCG GAGAAGCTCTTCAACTTCCTGCGCGATGAGCAGCTGCGTGCGGAGTGGGACATCCTCAGC AATGGAGGCCCCATGCAGGAGATGACCCAGATCGCCAAGGGGCAGCGGGATGGGAACTCG GTTTCACTCCTCAGGGCCAGTGCTGTGAGTGCCAACCAGAGCAGCATGCTGATACTTCAG GAGACGTGCACCGACGCTTCTGGCTCCATTGTTGTGTACGCTCCGGTAGACATCCCGGCA ATGCAGCTTGTCATGAATGGTGGCGACTCCACCTATGTTGCTCTGCTTCCATCCGGATTC GCCATCCTGCCCGATGGGCCTCGCATCGGCGCCACCGGGTACGAGACGGGCGGCTCTCTG CTCACCGTGGCGTTCCAGATTCTTGTCAACAACCAGCCCACCGCCAAGCTCACCGTGGAA TCGGTCGAGACCGTGAACAATCTCATCTCCTGCACCATCAAGAAGATCAAGACGGCGCTG CAGTGCGACGCCTGA

Peptide Sequence

PEP ID	Os02t0674800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27487866:27494913:-1 gene:Os02g0674800 transcript:Os02t0674800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE OUTMOST CELL-SPECIFIC GENE 5 description:Similar to OCL1 homeobox protein. (Os02t0674800-01)
Sequence	MSFGGLFDGGGGGGMQFPFASGFASSPALSLALDNAGGGIGGRMLGGGAGAGSSAGGAMT RDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKEC PHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIR EAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPP LLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARATGAAI PSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCI GMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGS RNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTG GNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATL QRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDG ATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILS NGGPMQEMTQIAKGQRDGNSVSLLRASAVSANQSSMLILQETCTDASGSIVVYAPVDIPA MQLVMNGGDSTYVALLPSGFAILPDGPRIGATGYETGGSLLTVAFQILVNNQPTAKLTVE SVETVNNLISCTIKKIKTALQCDA

Transcript Sequence

Transcript ID	Os02t0674800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27487866:27494913:-1 gene:Os02g0674800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE OUTMOST CELL-SPECIFIC GENE 5 description:Similar to OCL1 homeobox protein. (Os02t0674800-01)
Sequence	CTGGTTCTATTTTTCTCTCGCGTCCACACGACGGGGGGGCCTCCTCTCCTCTCCCTCCTC CCCTCGTCTCCACACTAGACTTGCCATTTTGACCCTCCGCTTGCTCCCTCCTCCCGTTCC TATCTCCCCGCCGCCGTACATAAGTGCTTTCTTTAATCGGATGCGTCCCCTCCCCTCGCC ACCAGTTCGTTCGCTCGCTCGCTCGCTCGCTCGCCTTGTTAATCTATCCCTCCCTCTCTC CCGCCCCTCCGTCCGCCGTGGAGGGTTAGGGTTTTGAGGGTTCGCTCGCCTCGGCGAGGC TTTATCTCTCTACCAGTAGTCTCTTACTCTTCTTCGTTGGGCCGTGGGTTAGGAATCGGG TTGTGAGGCGTGTGGGAGGGGCGGGGTAGATCCAAGGAAGAGGACTTTCTCGAGTTTACG CCGTGGTGTTTTGCTTCGGCGAGGAGGCGGCGGCATGAGCTTTGGGGGCCTCTTTGACGG CGGCGGCGGGGGAGGCATGCAGTTCCCTTTCGCCAGTGGCTTCGCGTCCTCGCCGGCGCT CTCCCTCGCGCTGGACAACGCCGGCGGTGGCATCGGCGGGCGGATGCTCGGCGGCGGCGC TGGCGCTGGTTCTAGCGCGGGCGGCGCGATGACGAGGGACACTGAGGCGGAGAACGACAG CCGGTCGGGAAGCGACCATCTCGACGCCATCTCGGCCGCCGGCGAGGACGACGTCGAGGA CGCCGAGCCCAGCAACTCCCGCAAGAGGAAGAAGCGATACCACCGCCACACGCCGCAGCA GATCCAAGAGCTCGAAGCGCTGTTCAAGGAGTGCCCCCATCCGGACGAGAAGCAGCGCGC CGAGCTCAGCAGGAGGCTCTCCCTCGATGCGCGGCAGGTCAAGTTCTGGTTCCAGAATCG CCGCACGCAGATGAAGACGCAACTGGAGCGGCACGAGAACGCGCTTCTCAAGCAGGAGAA CGACAAGCTGCGCGCCGAGAACATGACGATCCGGGAGGCGATGCGCAGCCCAATGTGCGG CAGCTGCGGGAGCCCCGCCATGCTCGGGGAGGTGTCCCTAGAGGAGCAGCACCTGCGCAT CGAGAATGCGCGCCTCAAGGACGAGCTCAACCGCGTGTGCGCCCTCGCCACCAAGTTCCT AGGCAAGCCCATCTCCCTCCTGTCGCCGCCGCCCTTGCTGCAGCCGCACCTCTCGCTGCC TATGCCTAACTCGTCGCTGGAGCTAGCGATCGGAGGCATCGGTGGCTTAGGGTCTCTCGG TACACTACCCGGCTGTATGAATGAGTTCGCCGGAGGCGTGTCGAGCCCGATGGGCACGGT GATCACGCCTGCGCGCGCAACCGGGGCTGCTATACCATCGCTGGTGGGTAACATCGACAG GTCCGTGTTCTTAGAGCTTGCAATCAGCGCGATGGACGAACTTGTCAAGATGGCACAGAT GGACGATCCATTGTGGGTTCCGGCACTGCCTGGTTCTCCCAGCAAGGAGGTGCTCAACTT TGAGGAGTATCTTCACTCCTTCCTACCGTGCATTGGCATGAAGCCTGCCGGCTACGTCTC TGAGGCCTCGAGGGAATCCGGTCTAGTCATCATCGACAACAGCCTTGCCCTTGTAGAGAC CCTCATGGATGAGAGACGGTGGTCTGACATGTTCTCGTGCATGATTGCTAAGGCAACAGT GCTTGAGGAGGTGTCTACCGGCATTGCAGGAAGCAGAAATGGCGCGTTGCTGCTGATGAA GGCTGAGCTACAGGTGCTCTCACCTCTAGTACCAATTAGGGAGGTTACATTTCTCCGGTT TTGTAAGCAGCTGGCTGAGGGTGCATGGGCAGTAGTTGATGTGTCCATTGATGGTTTAGT GAGAGATCATAATTCTGGAACGGCACCCACAGGTGGAAATGTGAAGTGTAGGAGGGTACC TTCCGGCTGTGTGATGCAAGACACTCCCAATGGGTATTGCAAGGTCACATGGGTTGAGCA TACGGAATACGATGAGGCATCAGTGCACCAGCTCTACCGTCCACTCCTTCGGTCTGGTCT CGCCTTTGGCGCCAGGCGTTGGCTTGCGACGCTGCAGCGCCAATGCGAATGCCTTGCCAT CCTCATGTCCTCTGCTACAGTGACAGCAAATGACTCGACTGCTATATCGCAAGAGGGCAA GCGAAGCATGCTGAAGCTGGCACGCCGGATGACGGAGAACTTCTGTGCTGGGGTGAGCGC ATCGTCTGCACGTGAATGGAGCAAGCTGGATGGTGCGACCGGTAGCATCGGGGAGGACGT GCGCGTGATGGCACGGAAGAGCGTGAGCGAGCCTGGAGAGCCACCGGGCGTGGTGCTGAG CGCGGCCACCTCGGTGTGGGTGCCCGTGGCTCCGGAGAAGCTCTTCAACTTCCTGCGCGA TGAGCAGCTGCGTGCGGAGTGGGACATCCTCAGCAATGGAGGCCCCATGCAGGAGATGAC CCAGATCGCCAAGGGGCAGCGGGATGGGAACTCGGTTTCACTCCTCAGGGCCAGTGCTGT GAGTGCCAACCAGAGCAGCATGCTGATACTTCAGGAGACGTGCACCGACGCTTCTGGCTC CATTGTTGTGTACGCTCCGGTAGACATCCCGGCAATGCAGCTTGTCATGAATGGTGGCGA CTCCACCTATGTTGCTCTGCTTCCATCCGGATTCGCCATCCTGCCCGATGGGCCTCGCAT CGGCGCCACCGGGTACGAGACGGGCGGCTCTCTGCTCACCGTGGCGTTCCAGATTCTTGT CAACAACCAGCCCACCGCCAAGCTCACCGTGGAATCGGTCGAGACCGTGAACAATCTCAT CTCCTGCACCATCAAGAAGATCAAGACGGCGCTGCAGTGCGACGCCTGAGTGTTTACAGT GGATTTATGTCCGCGGGGATACGCCGGCGGCGACGAGCCTGAGTCAAGAACGAACCGCGC GTTGAAAAAAGAAAATAACCTTTGCTAGGTGATAAGGATCTTGCTTGGCCGGTCCTTAGC ACAGAGCAATGGTGGTGGTTCGGGTATTGACTCTGGCCTCTACCGTACGCCGATCTCTCC CCGGCAGCCGGTGATCATTGGATGATACAGTACCATGCATTTTGGACATTTCTTCGAGGG GTTAAACTTATGCTTTAGTTTCGTCGTCTTAGGGAGTCAAACCTGTATACTTTTGGCAGT TGGCTCATCGTTGCTCTAGTGTTGTTTGTTTTTTGTTGTGCTATGGCTGTATGAGGTAGC CTGTACTAGTAGTTTCTCGGAAATGCTGGGTTCATACTGTACTAGTGTCGTCCATACTTC ATATAGGTTATGGTACAAGTGTAGGATCAAATTGAAGGTTTCAGAAAGTGTATCAGCCAA TAATGTCTGTTTGACAGTGGCATTGCTATGGATCAGCTGAAAATTGTTTTTTGCAATACA CATGGGATCAAAGCT