Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0673600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:27422921:27427541:1 gene:Os02g0673600 gene_biotype:protein_coding transcript_biotype:protein_coding description:ORMDL family protein. (Os02t0673600-01)
Sequence

ATGGCGAAGCTGTACGTGCAGGCGGTGCCGCCGCCGGATCTGAACAGGAACACGGAGTGG
TTCATGTACCCGGGCGTCTGGACGACCTACATCTGCATCCTCTTCTTCTCCTGGCTCCTC
GTCCTCTCCGTCTTCGGCTGCACGCCCGGCATGGCCTGGACCGTCGTCAATCTCTTCCAC
TTCGCGATCACATACCACTTTTTCCATTGGAAGAAGGGAACACCTTTTGCTGATGACCAG
GGAATGTACAACACATTGACTTGGTGGGAGCAAATGGACAATGGCAAACAGCTTACTCGC
AACAGGAAGTTCCTTGTTGTAGTTCCTGTTGTCCTGTATTTGATAGCTTCACACACTACA
GACTACCAACATCCTATGCTCTTCCTCAACACCCTTGCAGTCGCAGTGCTCGTGGTCGCT
AAACTACCGAACATGCACAAGGTCCGGATTTTTGGAATTAATGCTGGGAACTAG

Peptide Sequence

PEP ID

Os02t0673600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:27422921:27427541:1 gene:Os02g0673600 transcript:Os02t0673600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ORMDL family protein. (Os02t0673600-01)
Sequence

MAKLYVQAVPPPDLNRNTEWFMYPGVWTTYICILFFSWLLVLSVFGCTPGMAWTVVNLFH
FAITYHFFHWKKGTPFADDQGMYNTLTWWEQMDNGKQLTRNRKFLVVVPVVLYLIASHTT
DYQHPMLFLNTLAVAVLVVAKLPNMHKVRIFGINAGN

Transcript Sequence

Transcript ID

Os02t0673600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27422921:27427541:1 gene:Os02g0673600 gene_biotype:protein_coding transcript_biotype:protein_coding description:ORMDL family protein. (Os02t0673600-01)
Sequence

CGTCGCGTTATTTTTTCGCCCCCCATCTTTGAACCAAACAGCCAACCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCGGCCTCGGCCTCGGTTCCTCCTCCCCGCCGATCCCGCCGCTATA
AATCCCTCCCAGCCGCGCGGCTCGGAGACGCGCTCGCCGCTCGCTCGCTCGTCGCTGCTC
TGTTCCACAACCGCCGGCGGCCGGAGAGGGAGGGAAAGGAGAGGGAGGGAGGGGGGAGGC
GGGGGCGATGGCGAAGCTGTACGTGCAGGCGGTGCCGCCGCCGGATCTGAACAGGAACAC
GGAGTGGTTCATGTACCCGGGCGTCTGGACGACCTACATCTGCATCCTCTTCTTCTCCTG
GCTCCTCGTCCTCTCCGTCTTCGGCTGCACGCCCGGCATGGCCTGGACCGTCGTCAATCT
CTTCCACTTCGCGATCACATACCACTTTTTCCATTGGAAGAAGGGAACACCTTTTGCTGA
TGACCAGGGAATGTACAACACATTGACTTGGTGGGAGCAAATGGACAATGGCAAACAGCT
TACTCGCAACAGGAAGTTCCTTGTTGTAGTTCCTGTTGTCCTGTATTTGATAGCTTCACA
CACTACAGACTACCAACATCCTATGCTCTTCCTCAACACCCTTGCAGTCGCAGTGCTCGT
GGTCGCTAAACTACCGAACATGCACAAGGTCCGGATTTTTGGAATTAATGCTGGGAACTA
GGCAGCAGGATCCTTCAGCAGACATCTACCTATCTTCCTTTCCAGTTCATCTGGCTCATC
AGAGTATCAAGGAGTAGAGCTTAAATGTTGTTAGCTGATGGGTTGTGATCGTTGTATAGA
GAGATGCTCAGAGGCTGAAAACGATGCTGCTGTATATCTGATGTACACGAATTCTGTAGA
CTCTTAACGCTGCTATATGCTTTGATACAAATATCTGTCAGTTGCTGCATGTAGAGTCTT
GTTTTCAGAACAATACCTTCATATACTTGTTTTCAGAACCATACTTGTATGGTTCTCC