Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0673500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27416559:27421828:1 gene:Os02g0673500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0673500-01)
Sequence	ATGGCGGAGTCGCTGGGACTGGGAGCGCTCTGCCGCGGCGGGGGATGGTGCTACGCCGCG ATCTGGCGCTCCGACCGTCGCGACCCACGGTTGCTTACGATCGGTGAGTTCCACAGTGAA GATGGTACCAGAAATGTTGTTGAGAAGATGCTTAATCAGGTCCATGTTGTTGGAGAAGGC ATCATAGGGAGAGCTCTAGTAAGTGGAGAGTGCCAATGGATTTCTGATACCTCCTTTAGT TTTGCCCAGACAAGTGATGCAGATAACCAAGACTTATTTCAGGGCTATACTTGGTGGCAG CATCAGTTCCTGTGTGGAATAAAGACTATTGCAGTAATACCTATTGCAGATCTTGGTGTC GCACAGTTTGGTTCCATGCAAAAGATTTCTGAGTGCTTGGAGTTTCTGGATCAAGTTAAG GGCATATTTTGTCAGAGGGAAATCGTTCCGTGGGATCTTTCTGCTGAAGAAATTCAAAGA AATGTTCTCCCATATCATCAGCAATTTCAACTCAGTTCTCTAAGTAGTGCAGATGGTCTT ACAAATATCAAGACTGACCCAGAAAACAAGAAACTTCTGGAGAACTCAGCAAGTGTAGAG TCTCTACGTAGTTTAGCAAGTTTTTCAAGCAAATACTCTCAGAGTTCTTCAAACGGTTTC ACCTCCTATGAAAGCTGCAACAGTATGAATCCTCATATAGTGGCCATGCCAGTGAACTCC AAATCAATAAATACGGTGAGAGCATTTAATAGTACCGGAAAATTGCTGCAGCACAATATT GGTTCAGAAAACCCACTACAGATTAAATTCTGTCAACATCCTGATTCTAATCTGGCAAGT GCAACAGACGTTTTTTTAAGTTTGAACAATCTTCCGAGAATAGAGAACGAGATATCATGC CCACCTAACAAGCTAGGATATTGCATACAAAGTGAGAAGCCATATAGTTTTCAGAGTTCA TTCTCATCTTGTTTTTCTGTGGGTGATGAGCTGAAGCCAATTTTATTTGACAGTGCCACT TCTTTTGTTCAGAATGACTTAATGCAAGAGTTCAATCTCACTGGATTTACTTCTCAGGCT GATTCTGCGGTTCATGAGTTACCCAAACAAATTCTAGGGGAAACAGCTACTGGAGCATTA TATTCTGACAGAAAAAGTAACAATGGAAGTTCTGATTTGCTGGATGGTACAATATTTGAT CCCTTTGTGCAAGAATGGTGCGATAACAATGCCTTACTAGAAGGAAACACTCCCCATTTT GGTGCCACTACCGCCGATTCTGTTACAGAACATGCAAGCAGTTATCCATTGTCAGTTGAA GAGAGGAGCTTGTTTTCAGAATCTGTCTTTGAGGAACTACTTGGTGTTAGTGGCAATGTG AATACGGATGCACCGGGTGATTCAGCTGTGGTGATGGCTGGTGATCCATTAGTCGGCCTT GTCTCAGGCTGTCAATTGCCAACGTACACTCTTCAGGACTCTCTTTCAGTGTGCAAGCCA CAACAAGAACCATCACTGGATTTCCCTTCCGGTAGCGATACGTCTGAACATGTGCCAAAT GGATCATCAAAGATGATCCCACTGTCCCTAGGGGCGTTGTCCATGGACGATTGTTGCAGT TTGAACACGGCACATTCCAAGGTCAGCCAGGTTAAAAGGCCTGAGGAAGTGAAGGTAGTG AAGAAAAGAGCCAGACCGGGTGAGAGCACACGGCCAAGACCAAAGGACCGGCAGCAGATA CAGGATCGTGTCAAGGAACTACGTGAGATAGTCCCAAACAGTGCTAAGTGTAGCATTGAC GCTTTGTTGGACCGAACAATCAAACATATGCTCTTTCTGCAAAGCGTAACAAAGTATGCC GAGAAAATTAAGCAAGCTGATGAACCTAAGATGATCAGCAACAAGGATAGTGGCGCTGTC CTGAAAGAGAACTCAAGTGGTGTTGTCTTGAAAGATAACTCTAGTGCTGGAAGCAATAAT GGTGGTGCCACTTGGGCCTATGAGGTTGCAGGACGGACCATGGTTTGCCCAATAATCATC GAGGATCTTTCACCACCTGGTCAGATGCTTGTGGAGATGCTTTGTGAGGAACGCGGATTT TTCCTGGAGATAGCAGACACAATTCGGGGATTTGGACTGACAATCTTGAAGGGCCTGATG GAGCTCCGTGATGGCAAGATCATGGCTCGATTTCTCGTCGAGGCAAACAAGAATGTTACT AGGATGGACATATTCTTGTCACTCGTTCAGTTACTTCAGCAAAATAGCCTCAACCGATCC TCTGACCAGATATCAAAGGTCATTAGGAATGGGGTTCCATCGTTTGCAGAGCATCAGCAA TCTCCAATATCAGTGCCGGTTGGCCTTGCAGATAGATGA

Peptide Sequence

PEP ID	Os02t0673500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27416559:27421828:1 gene:Os02g0673500 transcript:Os02t0673500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0673500-01)
Sequence	MAESLGLGALCRGGGWCYAAIWRSDRRDPRLLTIGEFHSEDGTRNVVEKMLNQVHVVGEG IIGRALVSGECQWISDTSFSFAQTSDADNQDLFQGYTWWQHQFLCGIKTIAVIPIADLGV AQFGSMQKISECLEFLDQVKGIFCQREIVPWDLSAEEIQRNVLPYHQQFQLSSLSSADGL TNIKTDPENKKLLENSASVESLRSLASFSSKYSQSSSNGFTSYESCNSMNPHIVAMPVNS KSINTVRAFNSTGKLLQHNIGSENPLQIKFCQHPDSNLASATDVFLSLNNLPRIENEISC PPNKLGYCIQSEKPYSFQSSFSSCFSVGDELKPILFDSATSFVQNDLMQEFNLTGFTSQA DSAVHELPKQILGETATGALYSDRKSNNGSSDLLDGTIFDPFVQEWCDNNALLEGNTPHF GATTADSVTEHASSYPLSVEERSLFSESVFEELLGVSGNVNTDAPGDSAVVMAGDPLVGL VSGCQLPTYTLQDSLSVCKPQQEPSLDFPSGSDTSEHVPNGSSKMIPLSLGALSMDDCCS LNTAHSKVSQVKRPEEVKVVKKRARPGESTRPRPKDRQQIQDRVKELREIVPNSAKCSID ALLDRTIKHMLFLQSVTKYAEKIKQADEPKMISNKDSGAVLKENSSGVVLKDNSSAGSNN GGATWAYEVAGRTMVCPIIIEDLSPPGQMLVEMLCEERGFFLEIADTIRGFGLTILKGLM ELRDGKIMARFLVEANKNVTRMDIFLSLVQLLQQNSLNRSSDQISKVIRNGVPSFAEHQQ SPISVPVGLADR

Transcript Sequence

Transcript ID	Os02t0673500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27416559:27421828:1 gene:Os02g0673500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0673500-01)
Sequence	CCTCCCTCTCTCTTCCCCGCGCACGCTACGTTCGTTCGCTACGCACAGCGCCCCCACGCC ACGCTTCGGTTCTTCTACTGGTGCACAGCACAACCGGGGCGGTGAGCTTGATGCATGGCG GAGTCGCTGGGACTGGGAGCGCTCTGCCGCGGCGGGGGATGGTGCTACGCCGCGATCTGG CGCTCCGACCGTCGCGACCCACGGTTGCTTACGATCGGTGAGTTCCACAGTGAAGATGGT ACCAGAAATGTTGTTGAGAAGATGCTTAATCAGGTCCATGTTGTTGGAGAAGGCATCATA GGGAGAGCTCTAGTAAGTGGAGAGTGCCAATGGATTTCTGATACCTCCTTTAGTTTTGCC CAGACAAGTGATGCAGATAACCAAGACTTATTTCAGGGCTATACTTGGTGGCAGCATCAG TTCCTGTGTGGAATAAAGACTATTGCAGTAATACCTATTGCAGATCTTGGTGTCGCACAG TTTGGTTCCATGCAAAAGATTTCTGAGTGCTTGGAGTTTCTGGATCAAGTTAAGGGCATA TTTTGTCAGAGGGAAATCGTTCCGTGGGATCTTTCTGCTGAAGAAATTCAAAGAAATGTT CTCCCATATCATCAGCAATTTCAACTCAGTTCTCTAAGTAGTGCAGATGGTCTTACAAAT ATCAAGACTGACCCAGAAAACAAGAAACTTCTGGAGAACTCAGCAAGTGTAGAGTCTCTA CGTAGTTTAGCAAGTTTTTCAAGCAAATACTCTCAGAGTTCTTCAAACGGTTTCACCTCC TATGAAAGCTGCAACAGTATGAATCCTCATATAGTGGCCATGCCAGTGAACTCCAAATCA ATAAATACGGTGAGAGCATTTAATAGTACCGGAAAATTGCTGCAGCACAATATTGGTTCA GAAAACCCACTACAGATTAAATTCTGTCAACATCCTGATTCTAATCTGGCAAGTGCAACA GACGTTTTTTTAAGTTTGAACAATCTTCCGAGAATAGAGAACGAGATATCATGCCCACCT AACAAGCTAGGATATTGCATACAAAGTGAGAAGCCATATAGTTTTCAGAGTTCATTCTCA TCTTGTTTTTCTGTGGGTGATGAGCTGAAGCCAATTTTATTTGACAGTGCCACTTCTTTT GTTCAGAATGACTTAATGCAAGAGTTCAATCTCACTGGATTTACTTCTCAGGCTGATTCT GCGGTTCATGAGTTACCCAAACAAATTCTAGGGGAAACAGCTACTGGAGCATTATATTCT GACAGAAAAAGTAACAATGGAAGTTCTGATTTGCTGGATGGTACAATATTTGATCCCTTT GTGCAAGAATGGTGCGATAACAATGCCTTACTAGAAGGAAACACTCCCCATTTTGGTGCC ACTACCGCCGATTCTGTTACAGAACATGCAAGCAGTTATCCATTGTCAGTTGAAGAGAGG AGCTTGTTTTCAGAATCTGTCTTTGAGGAACTACTTGGTGTTAGTGGCAATGTGAATACG GATGCACCGGGTGATTCAGCTGTGGTGATGGCTGGTGATCCATTAGTCGGCCTTGTCTCA GGCTGTCAATTGCCAACGTACACTCTTCAGGACTCTCTTTCAGTGTGCAAGCCACAACAA GAACCATCACTGGATTTCCCTTCCGGTAGCGATACGTCTGAACATGTGCCAAATGGATCA TCAAAGATGATCCCACTGTCCCTAGGGGCGTTGTCCATGGACGATTGTTGCAGTTTGAAC ACGGCACATTCCAAGGTCAGCCAGGTTAAAAGGCCTGAGGAAGTGAAGGTAGTGAAGAAA AGAGCCAGACCGGGTGAGAGCACACGGCCAAGACCAAAGGACCGGCAGCAGATACAGGAT CGTGTCAAGGAACTACGTGAGATAGTCCCAAACAGTGCTAAGTGTAGCATTGACGCTTTG TTGGACCGAACAATCAAACATATGCTCTTTCTGCAAAGCGTAACAAAGTATGCCGAGAAA ATTAAGCAAGCTGATGAACCTAAGATGATCAGCAACAAGGATAGTGGCGCTGTCCTGAAA GAGAACTCAAGTGGTGTTGTCTTGAAAGATAACTCTAGTGCTGGAAGCAATAATGGTGGT GCCACTTGGGCCTATGAGGTTGCAGGACGGACCATGGTTTGCCCAATAATCATCGAGGAT CTTTCACCACCTGGTCAGATGCTTGTGGAGATGCTTTGTGAGGAACGCGGATTTTTCCTG GAGATAGCAGACACAATTCGGGGATTTGGACTGACAATCTTGAAGGGCCTGATGGAGCTC CGTGATGGCAAGATCATGGCTCGATTTCTCGTCGAGGCAAACAAGAATGTTACTAGGATG GACATATTCTTGTCACTCGTTCAGTTACTTCAGCAAAATAGCCTCAACCGATCCTCTGAC CAGATATCAAAGGTCATTAGGAATGGGGTTCCATCGTTTGCAGAGCATCAGCAATCTCCA ATATCAGTGCCGGTTGGCCTTGCAGATAGATGACAGATTAACAGTGACCACAGACACTTG GATTAGATCAGATTAGGAGGCATCAACTGAAAACATTCAGATTGCTGATTGCCGCTGGAA GTTGACTACCAAGGGGTAAGGTTTGTTAGATATGATAAGTTTTGAGGATGTAAAATATGT GCATTGCATCATTAAGAGATATTCTCTCCATTTAGTGTTGGTCATTCCAAGATGTACAAA TACTAAACAAATTTAGGAATCAGGCTTGTAATC