Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0672400-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:27352173:27356964:-1 gene:Os02g0672400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter, conserved site domain containing protein. (Os02t0672400-01);Sugar transporter, conserved site domain containing protein. (Os02t0672400-02)
Sequence

ATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACCCCACCGCCGGCC
CGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCCGCAGCCAGCGAC
CGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCGCGCTACGACTAC
CGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATCACCTGCCCCATC
AAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAATTCCATTGGTCAT
GCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTTTCAGCAAAGAAA
AGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCAGTAACATATGAG
AAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTTTCACCTCACTCC
AAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAACTGTCAAGAAGT
GGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAAATGCTTACACAA
ATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGTCATCGCATATTT
CCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACTGTGTCAAAGTTA
TTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAGTTCGCAGTTGGG
TATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAATGGCAATGAAGGT
TCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTTGCTGGTGCCGTC
AAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTGGCAGTACTAGTG
GAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGGGTGTCCGTTCTC
CCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTGGTGCCTGATGCA
AAAGCGGCAAAGAAGAAGTGA

Peptide Sequence

PEP ID

Os02t0672400-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:27352173:27356964:-1 gene:Os02g0672400 transcript:Os02t0672400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter, conserved site domain containing protein. (Os02t0672400-01);Sugar transporter, conserved site domain containing protein. (Os02t0672400-02)
Sequence

MAAAAEEPEPKPEIETPPPAREPPTEPPAAAPAPAAAASDRPLQPWEQHAAVINLPRYDY
RASGSLLLRSHSGFLITCPIKREKSATKEAISILENSIGHANSYSSEKSEPSDTEVSAKK
RKICSETPDIENSGDAVTYEKGDASETTGSVEKDSVSPHSKTSKNVDDTSNLSLVKLSRS
GLLFFSFPSGGLRVVQMLTQMFHSLHSGKLKSPQWCHRIFPIQETCVLSEAELHTTVSKL
FLDFVKSKEDQDEPIKFAVGYNRRGIDETEMKGQKNGNEGSKQQTLMDRDQCFKVVAGAV
KSVAENSIVDLRSPEVAVLVEMLPISGVSLGSSVAGVSVLPSELISTKPRLCVKALVPDA
KAAKKK

Transcript Sequence

Transcript ID

Os02t0672400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27352173:27356964:-1 gene:Os02g0672400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter, conserved site domain containing protein. (Os02t0672400-01);Sugar transporter, conserved site domain containing protein. (Os02t0672400-02)
Sequence

CGGCGCTTCTCCATGGCGGCGGCGGCGGAGGAACCGGAGCCGAAGCCCGAAATCGAAACC
CCACCGCCGGCCCGCGAGCCTCCAACTGAGCCACCAGCCGCCGCCCCCGCCCCCGCCGCC
GCAGCCAGCGACCGACCGCTGCAGCCATGGGAGCAGCACGCGGCGGTGATAAACCTCCCG
CGCTACGACTACCGCGCGTCGGGCTCCCTCCTCCTCCGCTCCCACTCCGGCTTCCTCATC
ACCTGCCCCATCAAACGTGAGAAAAGCGCAACAAAGGAAGCCATTTCCATTCTTGAAAAT
TCCATTGGTCATGCAAACAGCTATAGTTCTGAAAAGTCAGAACCAAGTGATACGGAAGTT
TCAGCAAAGAAAAGGAAAATATGTTCCGAGACACCAGATATTGAAAATTCAGGAGATGCA
GTAACATATGAGAAGGGTGATGCTTCAGAAACAACTGGCAGTGTAGAAAAAGACTCAGTT
TCACCTCACTCCAAAACAAGTAAAAATGTTGACGACACTTCAAATCTCTCACTGGTTAAA
CTGTCAAGAAGTGGCTTGCTTTTCTTTTCGTTTCCTAGCGGAGGCCTTCGTGTTGTTCAA
ATGCTTACACAAATGTTTCATTCACTGCATTCTGGCAAGCTTAAATCTCCACAATGGTGT
CATCGCATATTTCCTATTCAGGAAACATGTGTTCTGTCAGAAGCAGAACTACATACTACT
GTGTCAAAGTTATTTCTTGACTTTGTAAAGAGTAAGGAAGACCAAGATGAGCCTATCAAG
TTCGCAGTTGGGTATAATAGAAGAGGCATTGATGAAACAGAGATGAAAGGGCAGAAGAAT
GGCAATGAAGGTTCAAAACAACAAACTTTAATGGACAGGGACCAATGCTTCAAGGTCGTT
GCTGGTGCCGTCAAATCAGTTGCTGAGAACTCAATTGTGGATCTCAGATCTCCTGAGGTG
GCAGTACTAGTGGAGATGCTCCCTATTTCTGGGGTATCCCTGGGATCTTCAGTGGCTGGG
GTGTCCGTTCTCCCGTCTGAACTCATCTCGACTAAGCCTCGTCTCTGTGTCAAGGCTTTG
GTGCCTGATGCAAAAGCGGCAAAGAAGAAGTGATGCCTCCTTGGTTGATATCAATCAGAT
GGCACCGTGATGGGCATAATACAGATGATACAATTTGATCAGTCTGCTCATTTCAAGTTT
ACAACTCTGCGGCAGCTTGAATCTTCTATGGTCGAGATGGTTTAACAAACATCAAACCCT
TCCATGGTTGCGTGCTGTTCTACGCATCATATCATCTGTAGTCCCCACCAACTGCTGTTT
GGCTGGTTTTGGGTAGGTCAGTGTATAAGTTGCAGCCCTGCAGAGTTCGTTCATGCAGCT
CTTGGAGGGTACTTCTTGTCGTTATTTTTGCATGTTGCGATGTCAAAACCATGAGGTCGC
TGGCTATTATGGTGTTCTACTGTTTTCTGAACTTTATCTATTATGGCCAGTTCAG