Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0671300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27266202:27269207:-1 gene:Os02g0671300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 076 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0671300-01)
Sequence	ATGCGTCTGCACGCCGGCGCAGTGCAACTCCAGTATTTCATGCCCCAGCAGGGAGCCACC GCCGCCGCCGCCGCCGACCACCACCAGGCCGACTCGGCTACCGCGTGCAGCGCCTCCACT TCGCCGGCCGCCGCCGCCGCCACCATGTGGGAGTATCATCACCAGCTGTCGACGCACGCG GCCTTGCAGCCCTCGTCCTCTTTTCCCTACAGTTACTGGAGCCCCTACTCCGGGTCGACG GCGCTCGCCGGCTCGGCCTTCGCCGCCGACTCCTCCTCGTCGTCGACCGACGTCATGCGT CTCCCGGCTGCCGGCGAGCACGCCCACGGACACGGCTGGAGCCACGGCGAACTAAGCAAC AGCACCACCGGCGGCGGCTACAGGGAGAACTTCCTCGATCTGCTCGCGTCGAAGAACGTG ACGCCGGAAATGTTCGAGGAAGTCCCCGCCTCCGAGCACTACAATGTCGCACCCGCGGGG ACGACCCTGACGACGACGGCACGGTCGTTCGATCATCATGCTCGCTCCGACGTCTCGCCG ATCAAGTACGAGATCGCCGGCTCGCCGCTGTACTTGGGTGGCACTAACACCGTCCTCCAG GTCCAGGACATGACCATGATGAGTAGCACGCCAGCATGCTACGGCGAACACCACCACCAC CACCATCATCAGCTGACGAAGGAAGGCAGCTGCAACCATCAGCAGCAGGAGCAGCACGAG CTTGCGATTAGCCCCATGGCCTCATTTCTGCAGCAAATAAGCTCCGGCAGTGCTAGCGTT GGCGTGCACAACAGTAGCCTGGATTATTCAGGCTTAGGAGATCAGCCTGACAAGATTTGC TGCCAGGACGGCCGGGAAATGGAGGCTAGTCCTTTTGGCATGAGGAGCTTGCCGGATCTT GGGTCATTCGCCGGCTACACGCCGGCCATCGAGTCGACGTCGGTGCAACCGTACATGAGA TGCGCCAATTCGTCTGACAGCAATCGACAAGAACAGGAGACTGTCCCGGCAAGGAGTAGT AGCAGCGGCAGTGGAGCGGCGGCGACTGATCGTAAGAAGAGGAAGTCAGAGGAAAGGCAG GAAAGCACTGTCAAGAAGTCCAAGCAAGAGGCTTCCAAAGCATCACCTCCTAAGCAACCA GTGCCTAAAGTAAAGCTAGGGGAGAAGATCACAGCACTTCAGCAAATCGTTTCGCCGTTT GGGAAGACGGATACAGCATCGGTACTGTTTGAAACGATCAAGTATATCAAGTTTCTGCAC GAACAAGTACAGTTGCTAAGTGAGCCGTACACGAACTCCAGCAGGAGCAACAAGCAGGGT AACAGCGTTCCATGGGGAGATCAAGCAGAAGCGAGCAAGGGAGAGACGATGGAGCATGAC CTGAGGAATAGGGGGCTTTGCTTGGTGCCTGTCTCGTGGACGCCCGAAGTGTACCGGGAT GGCAACGCGATGGACTACTGGACGCCGGCGTACCGGGGCTGCCTGTACCGGTGA

Peptide Sequence

PEP ID	Os02t0671300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27266202:27269207:-1 gene:Os02g0671300 transcript:Os02t0671300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 076 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0671300-01)
Sequence	MRLHAGAVQLQYFMPQQGATAAAAADHHQADSATACSASTSPAAAAATMWEYHHQLSTHA ALQPSSSFPYSYWSPYSGSTALAGSAFAADSSSSSTDVMRLPAAGEHAHGHGWSHGELSN STTGGGYRENFLDLLASKNVTPEMFEEVPASEHYNVAPAGTTLTTTARSFDHHARSDVSP IKYEIAGSPLYLGGTNTVLQVQDMTMMSSTPACYGEHHHHHHHQLTKEGSCNHQQQEQHE LAISPMASFLQQISSGSASVGVHNSSLDYSGLGDQPDKICCQDGREMEASPFGMRSLPDL GSFAGYTPAIESTSVQPYMRCANSSDSNRQEQETVPARSSSSGSGAAATDRKKRKSEERQ ESTVKKSKQEASKASPPKQPVPKVKLGEKITALQQIVSPFGKTDTASVLFETIKYIKFLH EQVQLLSEPYTNSSRSNKQGNSVPWGDQAEASKGETMEHDLRNRGLCLVPVSWTPEVYRD GNAMDYWTPAYRGCLYR

Transcript Sequence

Transcript ID	Os02t0671300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27266202:27269207:-1 gene:Os02g0671300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 076 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os02t0671300-01)
Sequence	CTCCACATTCCAATCCTCAGCTCCGAACCCATGCGATGCGTCTGCACGCCGGCGCAGTGC AACTCCAGTATTTCATGCCCCAGCAGGGAGCCACCGCCGCCGCCGCCGCCGACCACCACC AGGCCGACTCGGCTACCGCGTGCAGCGCCTCCACTTCGCCGGCCGCCGCCGCCGCCACCA TGTGGGAGTATCATCACCAGCTGTCGACGCACGCGGCCTTGCAGCCCTCGTCCTCTTTTC CCTACAGTTACTGGAGCCCCTACTCCGGGTCGACGGCGCTCGCCGGCTCGGCCTTCGCCG CCGACTCCTCCTCGTCGTCGACCGACGTCATGCGTCTCCCGGCTGCCGGCGAGCACGCCC ACGGACACGGCTGGAGCCACGGCGAACTAAGCAACAGCACCACCGGCGGCGGCTACAGGG AGAACTTCCTCGATCTGCTCGCGTCGAAGAACGTGACGCCGGAAATGTTCGAGGAAGTCC CCGCCTCCGAGCACTACAATGTCGCACCCGCGGGGACGACCCTGACGACGACGGCACGGT CGTTCGATCATCATGCTCGCTCCGACGTCTCGCCGATCAAGTACGAGATCGCCGGCTCGC CGCTGTACTTGGGTGGCACTAACACCGTCCTCCAGGTCCAGGACATGACCATGATGAGTA GCACGCCAGCATGCTACGGCGAACACCACCACCACCACCATCATCAGCTGACGAAGGAAG GCAGCTGCAACCATCAGCAGCAGGAGCAGCACGAGCTTGCGATTAGCCCCATGGCCTCAT TTCTGCAGCAAATAAGCTCCGGCAGTGCTAGCGTTGGCGTGCACAACAGTAGCCTGGATT ATTCAGGCTTAGGAGATCAGCCTGACAAGATTTGCTGCCAGGACGGCCGGGAAATGGAGG CTAGTCCTTTTGGCATGAGGAGCTTGCCGGATCTTGGGTCATTCGCCGGCTACACGCCGG CCATCGAGTCGACGTCGGTGCAACCGTACATGAGATGCGCCAATTCGTCTGACAGCAATC GACAAGAACAGGAGACTGTCCCGGCAAGGAGTAGTAGCAGCGGCAGTGGAGCGGCGGCGA CTGATCGTAAGAAGAGGAAGTCAGAGGAAAGGCAGGAAAGCACTGTCAAGAAGTCCAAGC AAGAGGCTTCCAAAGCATCACCTCCTAAGCAACCAGTGCCTAAAGTAAAGCTAGGGGAGA AGATCACAGCACTTCAGCAAATCGTTTCGCCGTTTGGGAAGACGGATACAGCATCGGTAC TGTTTGAAACGATCAAGTATATCAAGTTTCTGCACGAACAAGTACAGTTGCTAAGTGAGC CGTACACGAACTCCAGCAGGAGCAACAAGCAGGGTAACAGCGTTCCATGGGGAGATCAAG CAGAAGCGAGCAAGGGAGAGACGATGGAGCATGACCTGAGGAATAGGGGGCTTTGCTTGG TGCCTGTCTCGTGGACGCCCGAAGTGTACCGGGATGGCAACGCGATGGACTACTGGACGC CGGCGTACCGGGGCTGCCTGTACCGGTGACATCTAACTGAAATGCAATTTGTTTGGAGAG CTGAAGATTCTAAGACAGCTAATGAGTATTCAGATAGTGAGATTCCAGAGAAACT