Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0670900-05
CDS Infomation

cds chromosome:IRGSP-1.0:2:27245220:27246916:1 gene:Os02g0670900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aromatic and neutral amino acid transporter 3 description:Similar to amino acid transport protein. (Os02t0670900-02);Similar to amino acid transport protein. (Os02t0670900-05)
Sequence

CTGGGGCTGCCGTACACGTTCTCGCGGACCGGGTGGGCGGCGGGGTCCATCCTCCTGCTC
TCCGTCGCGGCGCTCACCTTCTACTGCATGATGCTGCTCGTCGCCTGCCGCCGCCGCCTC
GCCGACGAGCACCCGAAGATCGCCTCCTTTGGGGACTTGGGGGACGCCGTGTTCCGCGGT
CCGGGGCGCCTCGCCGTGGACACCATGCTGGTGCTCAGCCAGGCCAGCTTCTGCGTCGGG
TACCTCATCTTCATCTCGAACACCATGGCGCACCTTTACCCCGTCTTCGCGCCCTCCTCC
AACGCGCTCCTCTCCCCAAAGGCGCTCTTCATCTGGGCCATGCTGCCGTTCCAGCTCGGG
CTCAACTCCATCAAGACGCTGACGCTCCTCGCGCCGCTCAGCATCTTCGCCGATGTGGTT
GACCTCGGCGCCATGGGCGTCGTTCTCGGGGAGGACGTGTCCGTCTGGCTCGCCAAACCA
CCACCCGTCTTCGCCTTCGGCGGCCTGAGCGCGATCCTGTACGGCATCGGCGTGTCCGTG
TACGCCTTCGAGGGAATCGGCATGGTCCTTCCGCTTGAGGCGGAGGCCGCCAACAAGAAG
AAGTTCGGGACCACGCTCGGGCTATCCATGGGGTTCATCGCCGTCATGTACGGCCTGTTC
GGCGCCATGGGGTACATCGCTTTCGGCGACGCCACGCGCGACATCATCACCACCAACCTC
GGGACCGGGTGGCTCTCGGCCGCCGTGCAGCTCGGGCTGTGCATCAACCTCTTCTTCACC
ATGCCGGTGATGATGCACCCCGTGTACGAGGTCGCCGAGCGGCTGCTCCACGGCAAACGC
TACTGCTGGTGGCTGCGGTGGCTGCTCGTCCTGGCCGTCGGCCTCTCGGCCATGTACGTG
CCCAACTTCACCGACTTCCTGGCGCTCGTCGGGAGCAGCGTCTGCGTCCTGCTCGGCTTC
GTGCTGCCGGCCTCGTTCCACCTCAAGGTGTTCGGCGCCGAGATGTCCTGGTCCGGGGTG
CTCAGCGACGTCCTGCTCGTCCTGCTCGGCCTCTCGCTCGCCGTCTTCGGCACCTACACG
TCCCTGCTGCAGATCTTCCATTCCTCCAGCGCTTAA

Peptide Sequence

PEP ID

Os02t0670900-05
PEP Infomation

pep chromosome:IRGSP-1.0:2:27245220:27246916:1 gene:Os02g0670900 transcript:Os02t0670900-05 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aromatic and neutral amino acid transporter 3 description:Similar to amino acid transport protein. (Os02t0670900-02);Similar to amino acid transport protein. (Os02t0670900-05)
Sequence

LGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRLADEHPKIASFGDLGDAVFRG
PGRLAVDTMLVLSQASFCVGYLIFISNTMAHLYPVFAPSSNALLSPKALFIWAMLPFQLG
LNSIKTLTLLAPLSIFADVVDLGAMGVVLGEDVSVWLAKPPPVFAFGGLSAILYGIGVSV
YAFEGIGMVLPLEAEAANKKKFGTTLGLSMGFIAVMYGLFGAMGYIAFGDATRDIITTNL
GTGWLSAAVQLGLCINLFFTMPVMMHPVYEVAERLLHGKRYCWWLRWLLVLAVGLSAMYV
PNFTDFLALVGSSVCVLLGFVLPASFHLKVFGAEMSWSGVLSDVLLVLLGLSLAVFGTYT
SLLQIFHSSSA

Transcript Sequence

Transcript ID

Os02t0670900-05
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27245220:27246916:1 gene:Os02g0670900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aromatic and neutral amino acid transporter 3 description:Similar to amino acid transport protein. (Os02t0670900-02);Similar to amino acid transport protein. (Os02t0670900-05)
Sequence

TGCTGGGGCTGCCGTACACGTTCTCGCGGACCGGGTGGGCGGCGGGGTCCATCCTCCTGC
TCTCCGTCGCGGCGCTCACCTTCTACTGCATGATGCTGCTCGTCGCCTGCCGCCGCCGCC
TCGCCGACGAGCACCCGAAGATCGCCTCCTTTGGGGACTTGGGGGACGCCGTGTTCCGCG
GTCCGGGGCGCCTCGCCGTGGACACCATGCTGGTGCTCAGCCAGGCCAGCTTCTGCGTCG
GGTACCTCATCTTCATCTCGAACACCATGGCGCACCTTTACCCCGTCTTCGCGCCCTCCT
CCAACGCGCTCCTCTCCCCAAAGGCGCTCTTCATCTGGGCCATGCTGCCGTTCCAGCTCG
GGCTCAACTCCATCAAGACGCTGACGCTCCTCGCGCCGCTCAGCATCTTCGCCGATGTGG
TTGACCTCGGCGCCATGGGCGTCGTTCTCGGGGAGGACGTGTCCGTCTGGCTCGCCAAAC
CACCACCCGTCTTCGCCTTCGGCGGCCTGAGCGCGATCCTGTACGGCATCGGCGTGTCCG
TGTACGCCTTCGAGGGAATCGGCATGGTCCTTCCGCTTGAGGCGGAGGCCGCCAACAAGA
AGAAGTTCGGGACCACGCTCGGGCTATCCATGGGGTTCATCGCCGTCATGTACGGCCTGT
TCGGCGCCATGGGGTACATCGCTTTCGGCGACGCCACGCGCGACATCATCACCACCAACC
TCGGGACCGGGTGGCTCTCGGCCGCCGTGCAGCTCGGGCTGTGCATCAACCTCTTCTTCA
CCATGCCGGTGATGATGCACCCCGTGTACGAGGTCGCCGAGCGGCTGCTCCACGGCAAAC
GCTACTGCTGGTGGCTGCGGTGGCTGCTCGTCCTGGCCGTCGGCCTCTCGGCCATGTACG
TGCCCAACTTCACCGACTTCCTGGCGCTCGTCGGGAGCAGCGTCTGCGTCCTGCTCGGCT
TCGTGCTGCCGGCCTCGTTCCACCTCAAGGTGTTCGGCGCCGAGATGTCCTGGTCCGGGG
TGCTCAGCGACGTCCTGCTCGTCCTGCTCGGCCTCTCGCTCGCCGTCTTCGGCACCTACA
CGTCCCTGCTGCAGATCTTCCATTCCTCCAGCGCTTAATCTCTGGAGAATCTTTACGGAT
AGCTGCGCCGATGATTGATTTGCTCATTTGCTTCGCGCGCGGGTGTCAGCCTGTCAGGTA
CGCTGGTTGCATTCTTCGTGTACAGAGAAGGTGATCGGTCGATCAGAGGGGCAATGCCCA
ATTCAGCTTGCTGTTGATTTGGGCATGGACAGCGTGCATCGGCCGCATTCTTTCGATTAC
AAGTCAGATGGTTTGTACAAGTTAGCGTGGATGGCATGGAGAAATCTGTATGGTTTTGCA
ACGACAGATTCCCATAGCTACTCGTGTCAGTTAATATTTATGTGTATGTCTTGGATGTTT
CAGCTGCTGCATTGCACGGTGGAATCGATGAAAGGACATAGTAAGTTTCAGTCTAAGTTT
AAGCCTATTTAGTTGATAAATAAAGTGTCTAGTTGAGGTTGCAGCTTGTGTGCGGTACTG
CGGGTTGTGTCAATTAGGAAGGCAAGCAATCGGGACGACTTGGCAAAGTATACATTCTAT
TCTGTTCATTCTGTTTTGTCCCAAGCAAGTAAACTTGTAATGCCCCAACTACCAATCGAA
ATATCGAATCTTCTTTC