Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0667600-03
CDS Infomation

cds chromosome:IRGSP-1.0:2:27105876:27110649:-1 gene:Os02g0667600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:002-146-F05, full insert sequence. (Os02t0667600-01);Hypothetical conserved gene. (Os02t0667600-02);Harpin-induced 1 domain containing protein. (Os02t0667600-03)
Sequence

ATGGCACGGCACGCGAAGACGGACTCCGACGTGACGAGCCTGGCGCCGTCCTCGCCGCCG
CGGTCGCCGCGCCGGTCGGCCTACTACGTGCTCAGCCCCGCCGCCTCCCACCCGGACGTC
GTGGTGGCCTCGGGCGGCGCAGGCGGCGGCGGCGGAGGCGTGGCCGCGGCCGAGAAGATG
TCGTTCGCGGGTTCTACCCCGGCCGAGTCGCCGCTGCACTACCACTACCACCACTCCGGC
GCCGCCGTGCACCACTCCCGGGAGTCTTCCACCGGCCGCCTCCTCTTCTCCGACCAGCTC
CGCTCCGGCGCCGCTGCCGGCGTCCCCTGGCGACGCCTTGCGCAGGGCAGCGGCGCCGGC
AGCGTCGGGGACGACGACGACGACGAAGGAGGACTCGCCGGGGCCGCCTCGCAGTGGAGG
TGCTACGCCCTCGGGGCGTTCGCCTTCGTGGCCGTGTTCGCCTTCTTCCTGCTCGTGCTC
TGGGGCGCCAGCAAGTCATACAAGCCCCACGTCGTCGTCAAGAGTGTGGTGTTCGAGACG
TACCACATCCAGGGCGGCACGGACCGGACGGGCGTCCCGACCAAGATGATGTCCGTCAAC
GCGACGGTCAGGCTGCGCTTCCGCAACCGGGGCACCTTCTTCAGCCTGCACGTCACCTCC
ACGCCGTTCCACCTCTTCTACGACGACCTCACCGTCGCCACCGGCCACATGGCGGAGTTC
TATCAGCCGCGGCGGAGCGGGCGCGTGGTGACGGTGTCCGTGGTGGGGAAGCAGGTGCCG
CTCTACGGCGCCGGCGCGGAGCTGCACAGCAAGCCCAACAACGGCCGCCTCGGCCCCGCG
GTGGTGCCCGTCAGGATGGCCTTCGTGCTGCGGGCGCGCGCCCACATCCTCGGCCTCCTC
GTCCGCTCCAAGTTCTACCGCCGCGTCCTCTGCCGCCTCGACGTCCGCGAGGCAAGCCTC
GGCAAGCCCGTCCACGGCGTCGCCGCCGACTGCGAGTACCACGACGGGAGGTGA

Peptide Sequence

PEP ID

Os02t0667600-03
PEP Infomation

pep chromosome:IRGSP-1.0:2:27105876:27110649:-1 gene:Os02g0667600 transcript:Os02t0667600-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:002-146-F05, full insert sequence. (Os02t0667600-01);Hypothetical conserved gene. (Os02t0667600-02);Harpin-induced 1 domain containing protein. (Os02t0667600-03)
Sequence

MARHAKTDSDVTSLAPSSPPRSPRRSAYYVLSPAASHPDVVVASGGAGGGGGGVAAAEKM
SFAGSTPAESPLHYHYHHSGAAVHHSRESSTGRLLFSDQLRSGAAAGVPWRRLAQGSGAG
SVGDDDDDEGGLAGAASQWRCYALGAFAFVAVFAFFLLVLWGASKSYKPHVVVKSVVFET
YHIQGGTDRTGVPTKMMSVNATVRLRFRNRGTFFSLHVTSTPFHLFYDDLTVATGHMAEF
YQPRRSGRVVTVSVVGKQVPLYGAGAELHSKPNNGRLGPAVVPVRMAFVLRARAHILGLL
VRSKFYRRVLCRLDVREASLGKPVHGVAADCEYHDGR

Transcript Sequence

Transcript ID

Os02t0667600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27105876:27110649:-1 gene:Os02g0667600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:002-146-F05, full insert sequence. (Os02t0667600-01);Hypothetical conserved gene. (Os02t0667600-02);Harpin-induced 1 domain containing protein. (Os02t0667600-03)
Sequence

CCCTCTATCGCTCACGCGGTCACGCCCATCGCGCCGCGCGGCTCCCGAGATGGCACGGCA
CGCGAAGACGGACTCCGACGTGACGAGCCTGGCGCCGTCCTCGCCGCCGCGGTCGCCGCG
CCGGTCGGCCTACTACGTGCTCAGCCCCGCCGCCTCCCACCCGGACGTCGTGGTGGCCTC
GGGCGGCGCAGGCGGCGGCGGCGGAGGCGTGGCCGCGGCCGAGAAGATGTCGTTCGCGGG
TTCTACCCCGGCCGAGTCGCCGCTGCACTACCACTACCACCACTCCGGCGCCGCCGTGCA
CCACTCCCGGGAGTCTTCCACCGGCCGCCTCCTCTTCTCCGACCAGCTCCGCTCCGGCGC
CGCTGCCGGCGTCCCCTGGCGACGCCTTGCGCAGGGCAGCGGCGCCGGCAGCGTCGGGGA
CGACGACGACGACGAAGGAGGACTCGCCGGGGCCGCCTCGCAGTGGAGGTGCTACGCCCT
CGGGGCGTTCGCCTTCGTGGCCGTGTTCGCCTTCTTCCTGCTCGTGCTCTGGGGCGCCAG
CAAGTCATACAAGCCCCACGTCGTCGTCAAGAGTGTGGTGTTCGAGACGTACCACATCCA
GGGCGGCACGGACCGGACGGGCGTCCCGACCAAGATGATGTCCGTCAACGCGACGGTCAG
GCTGCGCTTCCGCAACCGGGGCACCTTCTTCAGCCTGCACGTCACCTCCACGCCGTTCCA
CCTCTTCTACGACGACCTCACCGTCGCCACCGGCCACATGGCGGAGTTCTATCAGCCGCG
GCGGAGCGGGCGCGTGGTGACGGTGTCCGTGGTGGGGAAGCAGGTGCCGCTCTACGGCGC
CGGCGCGGAGCTGCACAGCAAGCCCAACAACGGCCGCCTCGGCCCCGCGGTGGTGCCCGT
CAGGATGGCCTTCGTGCTGCGGGCGCGCGCCCACATCCTCGGCCTCCTCGTCCGCTCCAA
GTTCTACCGCCGCGTCCTCTGCCGCCTCGACGTCCGCGAGGCAAGCCTCGGCAAGCCCGT
CCACGGCGTCGCCGCCGACTGCGAGTACCACGACGGGAGGTGACCACGGGCCCTTGCATT
CAGACGCTGCGTCGATACCGTGGGCGTGGATTGTTAATTGGAAGCTCTGAAACTAGACTT
CTGGGGGTGGTAGTAGTATTGGTAACACGAGGTAAAATCCAATCCGTTGTAATGGAACAA
GTGTTGATGCTAACAGTAATCCTGCTAATTCTAGAAAATTTTACTTGCTGTTG