Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0666600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:27073256:27074090:1 gene:Os02g0666600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os02t0666600-01)
Sequence

ATGGCGCGTCAGGGGAGCACGACGCGGCGGCCGCGGCCAACGACGTCGAAGTGCATCGCG
GCGGCGCTGCTGGCGATTGTCGTCTTGCTGGTGATCATCGTCATCCTGTGGCTGACGGTC
CGCCCGGCGAAGCCGCTGCTCGTCTACGTCGACCACGCCGCGGTGACCGGGTTCAACTTC
ACGTCCGGCGGCAGCCTCAACGGCACCTTCGACATCACCCTGCGCGCATACAACCAGAAC
AAGCGCGCCGCCGTGTGGTACAAGTCGGTCGAGGTCGGGGTGTGGTACGGCGGCACGTAC
CTCGCCGGCGCCGTGGCGCCCGGGTTCGACCTGCCGCCGCTGAACGTGAAGAGGATCGAC
GTGGCCGCGCCCGCCGTGAGGGCGGCGCTGCCGCGGGGCGTGGAGGCGACCGTGAAGAAG
GACAGGTCCGACGGGAAGCTGCCGGTGGACGTGCACATCAAGGGCAAGGTGCGGTTCCGG
TACGGCTTGGTGAGGACACGGCGCTACAAGTTGCGCGCGAGCTGCTCGCCGGTGGTCGTC
GACTTCTCGTCGCCGAGCTCGTTCGATCGGGTGAACTGCCACGTCCATATCTGA

Peptide Sequence

PEP ID

Os02t0666600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:27073256:27074090:1 gene:Os02g0666600 transcript:Os02t0666600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os02t0666600-01)
Sequence

MARQGSTTRRPRPTTSKCIAAALLAIVVLLVIIVILWLTVRPAKPLLVYVDHAAVTGFNF
TSGGSLNGTFDITLRAYNQNKRAAVWYKSVEVGVWYGGTYLAGAVAPGFDLPPLNVKRID
VAAPAVRAALPRGVEATVKKDRSDGKLPVDVHIKGKVRFRYGLVRTRRYKLRASCSPVVV
DFSSPSSFDRVNCHVHI

Transcript Sequence

Transcript ID

Os02t0666600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:27073256:27074090:1 gene:Os02g0666600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Harpin-induced 1 domain containing protein. (Os02t0666600-01)
Sequence

CTGTGTGTGTGTGGAAGAATGGCGCGTCAGGGGAGCACGACGCGGCGGCCGCGGCCAACG
ACGTCGAAGTGCATCGCGGCGGCGCTGCTGGCGATTGTCGTCTTGCTGGTGATCATCGTC
ATCCTGTGGCTGACGGTCCGCCCGGCGAAGCCGCTGCTCGTCTACGTCGACCACGCCGCG
GTGACCGGGTTCAACTTCACGTCCGGCGGCAGCCTCAACGGCACCTTCGACATCACCCTG
CGCGCATACAACCAGAACAAGCGCGCCGCCGTGTGGTACAAGTCGGTCGAGGTCGGGGTG
TGGTACGGCGGCACGTACCTCGCCGGCGCCGTGGCGCCCGGGTTCGACCTGCCGCCGCTG
AACGTGAAGAGGATCGACGTGGCCGCGCCCGCCGTGAGGGCGGCGCTGCCGCGGGGCGTG
GAGGCGACCGTGAAGAAGGACAGGTCCGACGGGAAGCTGCCGGTGGACGTGCACATCAAG
GGCAAGGTGCGGTTCCGGTACGGCTTGGTGAGGACACGGCGCTACAAGTTGCGCGCGAGC
TGCTCGCCGGTGGTCGTCGACTTCTCGTCGCCGAGCTCGTTCGATCGGGTGAACTGCCAC
GTCCATATCTGAGTGCGCGCCGGCGGCGCGTTCACGACTGAATGCATGGCAAATTGTACA
CATCTTGCGTGTTTTCTCTCTGCTTTGAGGATTTGTTTGTGTTTGGATTGATTCGGTTGT
TAAATACTGGTTTGTGACATTTCTTCACTTGTATTATTCATTTTTTTAATATTTTTTCTT
CGGTGTGTACATGCGTATTTCTCCAGCATCTAATTTGTGGGAGGAAAGGTTCATG