Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0666300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:27048920:27061955:-1 gene:Os02g0666300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YODA 2, OsYODA2, YODA2 description:Similar to MAP3Ka. (Os02t0666300-01)
Sequence	ATGCCACCATGGTGGGGGAAGTCTTCATCAAAAGAAGTAAAGAAGACTGCCAAAGAAAAC CTCATTGACACATTTCATCGGTTATTAAGTCCAAATGAGCAAAAGGGGAGAACAAAATCA CGGGGGAATCGTAGACATAGTAAAGATCCAACTGCTGAGAAAGGTTGCTGGTCTACTGCC CAATCACGCTCTGCATCCCCTTCAAAAGAGGTTTCTCGTTGTCAAAGCTTTGCTGCAGCC AGAGCACATGCACAACCACTTCCCCTTCCTAGATCCCGTGCTATGGTGGCACGTACTGCT TCTGATATTACCGAATCAAAGGTCGTTTTGGAAAAGCGTGGCAAAGGACAACAACTACCG CTCCCTACCACAAATTGGGTTAAAGAAAGACCTGAAACTACCGAACCTGTTGCAGAATTA TCAACTGCTTCTATCTCCAGCCATGGTTCTATAGATAGCGATGATCCTGGAGATTTGCGA CTTCAGGGACCTGTGGCAAATGACACCGACAATGTGGCTAAAGTTGCTACAACCGGTAAT TCAAGTGTTGTGCATAAGGAGTGTTCTAGTGCCATCACCAGAAAGGGCACTAAGGAAGTG ACGATGCCAACCAATGCTTTCTTGAGTAATCAAATTCTATCTACAAGTCCCAGAGGTACT GTTGTTGCTGACAGTTACCAGTCAAATTTACAAAATTCACGAAAGGTTGTTCTGGACAGT GCTCCCAATAGTGTGATGTCAAGCCCTTCTCGAAGCCCAAGAATATTATGCCCTGATCAG ATTCCAAGTTCAGCATTTTGGGCAGTTAAGCCTCATACAGATGTAACTTTTGTTGGGTCT GCTCAGTGCTCCAGTCCTGGTTCAGGGCAAACATCTGGGCATAATTCAGTGGGAGGTGAT ATGCTAGCCCAGCTCTTTTGGCAACCTAGCCGAGGTAGTCCAGAGTGTTCACCAATTCCC AGCCCAAGAATGACAAGCCCTGGTCCAAGTTCAAGGGTACATAGTGGAAGTGTCTCTCCA TTGCATCCAAGGGCTGGTGGGATGGCACCTGAATCTCCAACAAGGCGACTTGATGAAGGG AAGAGGAAGCAAACCCACAGATTGCCCCTTCCACCACTAAGCATATGTAACAATTCCACC TTTTTGCCAAACAATTCCACCCCAACTAGTCCTATCTCACATAGTCCTGGTAGAGTAGAA AATCCAACTAGTCCTGGATCACGGTGGAAGAAGGGAAAGCTTGTCGGCCGTGGGACATTT GGCCATGTATACATTGGCTTTAACAGTGATAAAGGTGAAATGTGTGCAATGAAGGAGGTC ACCCTTTTCTCAGACGATCCTAAATCAAAAGAAAGTGCAAAGCAGTTGTGTCAGGAAATA TTACTTCTGAATCGTCTGCAACATCCAAATATTGTACGATACTATGGATCTGAAATGGTT GATGATAAACTTTATATATACCTGGAGTATGTTTCTGGTGGATCCATCCATAAACTACTC CAGGAGTATGGGCAATTTGGTGAACCTGCTATCCGCAGTTATACCAAGCAAATACTTTTA GGCTTGGCTTATCTGCATGCAAAAAATACGGTTCACAGGGACATTAAAGGTGCAAACATA CTGGTAGATCCTAATGGTCGTGTAAAGCTTGCTGACTTCGGAATGGCAAAACATATCAAT GGGCAGCAGTGTGCCTTTTCATTTAAGGGTAGCCCGTACTGGATGGCTCCTGAGGTTATA AAAAATTCTAATGGATGTAATCTTGCTGTTGACATATGGAGCTTAGGATGCACGGTTTTA GAGATGGCTACCTCAAAACCACCATGGAGCCAATATGAAGGGATTGCTGCAGTGTTTAAG ATAGGAAACAGTAAGGAGCTTCCACCAATACCAGATCACCTCTCAGAAGAGGGCAGAGAC TTTATAAGACAGTGCCTGCAGCGCAATCCATCCAGCCGTCCAACAGCAGTGGATCTTTTG CAGCATTCATTTATACGAAATGCATCTCCACTTGAAAAATCACTGTCGGATCCATTGCTA CAGTTGTCTACTACATCCTGCAAACCAGATCTGAAGGTGGTCGGGCATGCCAGAAATATG TCTTCTTTGGGTTTGGAAGGGCAATCCATTTACCAGAGAAGAGCTGCTAAATTTTCTTCT GTGCACAGTGATATTCATGTACGAAGCTATATATCTTGCCCTGTTTCTCCATGTGGGAGC CCTCATCTGAGGTCAAGATCTCCACAACATCAAAATGGTATAATGTCACCCTCTCCGATT TCGAGCCCAAGAACTACTTCAGGTGCTTCCACTCCTCTGACTGGTGGTAATGGAGCTATT CCTTTTAACCATGCAAGACACCTAGCTTACAATAATGAGGGTTTCACAATTACATCGAGA TGTCTTGATGAGCCCTTGCCAAACCAGCCTCCAGATCCGGTCCTTGGTCGTTTTGTTAGA GTGAAACAACCCTCGCTAGGTTTTCAGGAGAGGGCAGTCCCTGAAGCTGACATTCTGAGC CCTCAATTTGGAAGGATGGGACATGTGAGCGTGTGGAATTTGCATGATAAGCCACTGCCT TCTGAGCATGCTTCACAGAAGGGCTTTGAGGATCGGGTAAAACTTAAGCCTCCACTGGAT TTGAGATCTGGTCCACCACACCTTGGGTGCAACCATGGTCATTGA

Peptide Sequence

PEP ID	Os02t0666300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:27048920:27061955:-1 gene:Os02g0666300 transcript:Os02t0666300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YODA 2, OsYODA2, YODA2 description:Similar to MAP3Ka. (Os02t0666300-01)
Sequence	MPPWWGKSSSKEVKKTAKENLIDTFHRLLSPNEQKGRTKSRGNRRHSKDPTAEKGCWSTA QSRSASPSKEVSRCQSFAAARAHAQPLPLPRSRAMVARTASDITESKVVLEKRGKGQQLP LPTTNWVKERPETTEPVAELSTASISSHGSIDSDDPGDLRLQGPVANDTDNVAKVATTGN SSVVHKECSSAITRKGTKEVTMPTNAFLSNQILSTSPRGTVVADSYQSNLQNSRKVVLDS APNSVMSSPSRSPRILCPDQIPSSAFWAVKPHTDVTFVGSAQCSSPGSGQTSGHNSVGGD MLAQLFWQPSRGSPECSPIPSPRMTSPGPSSRVHSGSVSPLHPRAGGMAPESPTRRLDEG KRKQTHRLPLPPLSICNNSTFLPNNSTPTSPISHSPGRVENPTSPGSRWKKGKLVGRGTF GHVYIGFNSDKGEMCAMKEVTLFSDDPKSKESAKQLCQEILLLNRLQHPNIVRYYGSEMV DDKLYIYLEYVSGGSIHKLLQEYGQFGEPAIRSYTKQILLGLAYLHAKNTVHRDIKGANI LVDPNGRVKLADFGMAKHINGQQCAFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVL EMATSKPPWSQYEGIAAVFKIGNSKELPPIPDHLSEEGRDFIRQCLQRNPSSRPTAVDLL QHSFIRNASPLEKSLSDPLLQLSTTSCKPDLKVVGHARNMSSLGLEGQSIYQRRAAKFSS VHSDIHVRSYISCPVSPCGSPHLRSRSPQHQNGIMSPSPISSPRTTSGASTPLTGGNGAI PFNHARHLAYNNEGFTITSRCLDEPLPNQPPDPVLGRFVRVKQPSLGFQERAVPEADILS PQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNHGH

Transcript Sequence

Transcript ID	Os02t0666300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:27048920:27061955:-1 gene:Os02g0666300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YODA 2, OsYODA2, YODA2 description:Similar to MAP3Ka. (Os02t0666300-01)
Sequence	ACCGTCTCTCTCCGTTCCTCTCCTCTGCTCATCTTATCTGTTCGTCTGAAAAAAAAAAAC CGTTTCCGGCGGACGCACGGGCGGAGGCTCGGCCAGCGTTCTCCTCCTCCGCGACACCGA CTCGCCTCCGTCGCGCGCGCGGCCGGCGAGCAGGGCCGGAGGCGCAGTGCGGACGGGCTG CTGCTCCCCTTCCCCGACCCCCTACCGCACTAGTATTCTCCCCTGTGCGGCCGGCCGGCG AGCATCTCGGTTCGAATCGAAGTATCGAATTGAAGCCTTTGTGGTGAAGGCATTAAACAG AAATCAAAGTAGCATGAGCAAGCACTAACTGGGAATCTCCATAATACAGCATTCCAGTGA GTTGAGGACTTTTTTTTGTCACTACAGAAACTAAGGATACCTGCGTGATTTCAAAATTTC AATGTGTGATTAGCTCAGTGAAATCCTGTCCAACTTGTTTCATATTCAATATGCCACCAT GGTGGGGGAAGTCTTCATCAAAAGAAGTAAAGAAGACTGCCAAAGAAAACCTCATTGACA CATTTCATCGGTTATTAAGTCCAAATGAGCAAAAGGGGAGAACAAAATCACGGGGGAATC GTAGACATAGTAAAGATCCAACTGCTGAGAAAGGTTGCTGGTCTACTGCCCAATCACGCT CTGCATCCCCTTCAAAAGAGGTTTCTCGTTGTCAAAGCTTTGCTGCAGCCAGAGCACATG CACAACCACTTCCCCTTCCTAGATCCCGTGCTATGGTGGCACGTACTGCTTCTGATATTA CCGAATCAAAGGTCGTTTTGGAAAAGCGTGGCAAAGGACAACAACTACCGCTCCCTACCA CAAATTGGGTTAAAGAAAGACCTGAAACTACCGAACCTGTTGCAGAATTATCAACTGCTT CTATCTCCAGCCATGGTTCTATAGATAGCGATGATCCTGGAGATTTGCGACTTCAGGGAC CTGTGGCAAATGACACCGACAATGTGGCTAAAGTTGCTACAACCGGTAATTCAAGTGTTG TGCATAAGGAGTGTTCTAGTGCCATCACCAGAAAGGGCACTAAGGAAGTGACGATGCCAA CCAATGCTTTCTTGAGTAATCAAATTCTATCTACAAGTCCCAGAGGTACTGTTGTTGCTG ACAGTTACCAGTCAAATTTACAAAATTCACGAAAGGTTGTTCTGGACAGTGCTCCCAATA GTGTGATGTCAAGCCCTTCTCGAAGCCCAAGAATATTATGCCCTGATCAGATTCCAAGTT CAGCATTTTGGGCAGTTAAGCCTCATACAGATGTAACTTTTGTTGGGTCTGCTCAGTGCT CCAGTCCTGGTTCAGGGCAAACATCTGGGCATAATTCAGTGGGAGGTGATATGCTAGCCC AGCTCTTTTGGCAACCTAGCCGAGGTAGTCCAGAGTGTTCACCAATTCCCAGCCCAAGAA TGACAAGCCCTGGTCCAAGTTCAAGGGTACATAGTGGAAGTGTCTCTCCATTGCATCCAA GGGCTGGTGGGATGGCACCTGAATCTCCAACAAGGCGACTTGATGAAGGGAAGAGGAAGC AAACCCACAGATTGCCCCTTCCACCACTAAGCATATGTAACAATTCCACCTTTTTGCCAA ACAATTCCACCCCAACTAGTCCTATCTCACATAGTCCTGGTAGAGTAGAAAATCCAACTA GTCCTGGATCACGGTGGAAGAAGGGAAAGCTTGTCGGCCGTGGGACATTTGGCCATGTAT ACATTGGCTTTAACAGTGATAAAGGTGAAATGTGTGCAATGAAGGAGGTCACCCTTTTCT CAGACGATCCTAAATCAAAAGAAAGTGCAAAGCAGTTGTGTCAGGAAATATTACTTCTGA ATCGTCTGCAACATCCAAATATTGTACGATACTATGGATCTGAAATGGTTGATGATAAAC TTTATATATACCTGGAGTATGTTTCTGGTGGATCCATCCATAAACTACTCCAGGAGTATG GGCAATTTGGTGAACCTGCTATCCGCAGTTATACCAAGCAAATACTTTTAGGCTTGGCTT ATCTGCATGCAAAAAATACGGTTCACAGGGACATTAAAGGTGCAAACATACTGGTAGATC CTAATGGTCGTGTAAAGCTTGCTGACTTCGGAATGGCAAAACATATCAATGGGCAGCAGT GTGCCTTTTCATTTAAGGGTAGCCCGTACTGGATGGCTCCTGAGGTTATAAAAAATTCTA ATGGATGTAATCTTGCTGTTGACATATGGAGCTTAGGATGCACGGTTTTAGAGATGGCTA CCTCAAAACCACCATGGAGCCAATATGAAGGGATTGCTGCAGTGTTTAAGATAGGAAACA GTAAGGAGCTTCCACCAATACCAGATCACCTCTCAGAAGAGGGCAGAGACTTTATAAGAC AGTGCCTGCAGCGCAATCCATCCAGCCGTCCAACAGCAGTGGATCTTTTGCAGCATTCAT TTATACGAAATGCATCTCCACTTGAAAAATCACTGTCGGATCCATTGCTACAGTTGTCTA CTACATCCTGCAAACCAGATCTGAAGGTGGTCGGGCATGCCAGAAATATGTCTTCTTTGG GTTTGGAAGGGCAATCCATTTACCAGAGAAGAGCTGCTAAATTTTCTTCTGTGCACAGTG ATATTCATGTACGAAGCTATATATCTTGCCCTGTTTCTCCATGTGGGAGCCCTCATCTGA GGTCAAGATCTCCACAACATCAAAATGGTATAATGTCACCCTCTCCGATTTCGAGCCCAA GAACTACTTCAGGTGCTTCCACTCCTCTGACTGGTGGTAATGGAGCTATTCCTTTTAACC ATGCAAGACACCTAGCTTACAATAATGAGGGTTTCACAATTACATCGAGATGTCTTGATG AGCCCTTGCCAAACCAGCCTCCAGATCCGGTCCTTGGTCGTTTTGTTAGAGTGAAACAAC CCTCGCTAGGTTTTCAGGAGAGGGCAGTCCCTGAAGCTGACATTCTGAGCCCTCAATTTG GAAGGATGGGACATGTGAGCGTGTGGAATTTGCATGATAAGCCACTGCCTTCTGAGCATG CTTCACAGAAGGGCTTTGAGGATCGGGTAAAACTTAAGCCTCCACTGGATTTGAGATCTG GTCCACCACACCTTGGGTGCAACCATGGTCATTGATTTCACCCAAAGGTGTGCTGGATAG GCATTGAGTTGGAGCTTGATGAGAGCTGCTGAGCCAGTTTGCCCATCTATTTACTGCAAG CCTGGCACTGTATCATAGTACACGAATAATTTCATTAATTATTTCAGAAGCTGACCGTCT CAACAAAGGTGAGCTATGCCCCCACCAGGAACAGGCGTTGACTTCCATATTACCATGCCT GTTATGTGTTAACCAGTTACACGTCGTTGATGCAATTGTATATTACAGAGGGTCTAGATA GCCAAGGACCCAAAACAGTAGTTCTTCACCTGTATACTCTGGTATCTACATTCGTTTTCC TTTGGACAATCTATGGGTTTCGAGGCCATTGTACAGGAGGAAACTCAACTAGAAGTCCAC ATTTTGCAAAGGTAGAGGCAATTGAACCATTCAATACCCATTCTTTTTCTCAGTACTTCC CCTTGCTGCGAGCTTTTGCAACTAGTCAGCTGCAGCCTGCATAGTGAAAGCGTTGTTGCT GTACTCAGGTAATCCATTCACTGTATCTATTACTCTGGAAATTATACAGAGATTCTGATC GTTAA